RNA–Protein interactions for RNA: ENST00000474273.5

SSB-210, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-210ENST00000474273 NPHP3-ACAD11A0A0J9YXS1 232 aa6.91□□□□□ -1.3
SSB-210ENST00000474273 C7orf72A4D263 438 aa6.91□□□□□ -1.3
SSB-210ENST00000474273 LAMTOR5O43504 91 aa6.91□□□□□ -1.3
SSB-210ENST00000474273 FUCA1P04066 466 aa6.91□□□□□ -1.3
SSB-210ENST00000474273 ERCC5P28715 1186 aaPredicted RBP6.91□□□□□ -1.3
SSB-210ENST00000474273 ITGA1P56199 1179 aa6.91□□□□□ -1.3
SSB-210ENST00000474273 AMPD2Q01433 879 aa6.91□□□□□ -1.3
SSB-210ENST00000474273 GRB10Q13322 594 aa6.91□□□□□ -1.3
SSB-210ENST00000474273 LCORQ96JN0 433 aaPredicted RBP6.91□□□□□ -1.3
SSB-210ENST00000474273 C9orf118A6NHY6 69 aa6.9□□□□□ -1.3
SSB-210ENST00000474273 HEATR6Q6AI08 1181 aaKnown RBP6.9□□□□□ -1.3
SSB-210ENST00000474273 CD300LDQ6UXZ3 194 aa6.9□□□□□ -1.3
SSB-210ENST00000474273 PLEKHH3Q7Z736 793 aa6.9□□□□□ -1.3
SSB-210ENST00000474273 ZC3H18Q86VM9 953 aaKnown RBP6.9□□□□□ -1.3
SSB-210ENST00000474273 ZFPM1Q8IX07 1006 aa6.9□□□□□ -1.3
SSB-210ENST00000474273 FAM26EQ8N5C1 309 aa6.9□□□□□ -1.3
SSB-210ENST00000474273 C19orf47Q8N9M1 422 aaKnown RBP6.9□□□□□ -1.3
SSB-210ENST00000474273 PLEKHO2Q8TD55 490 aa6.9□□□□□ -1.3
SSB-210ENST00000474273 ZNF428Q96B54 188 aa6.9□□□□□ -1.3
SSB-210ENST00000474273 CDK5RAP1Q96SZ6 601 aaKnown RBP6.9□□□□□ -1.3
SSB-210ENST00000474273 AP5M1Q9H0R1 490 aa6.9□□□□□ -1.3
SSB-210ENST00000474273 SLITRK6Q9H5Y7 841 aa6.9□□□□□ -1.3
SSB-210ENST00000474273 PPP4R1LQ9P1A2 415 aa6.9□□□□□ -1.3
SSB-210ENST00000474273 CGGBP1Q9UFW8 167 aaPredicted RBP6.9□□□□□ -1.3
SSB-210ENST00000474273 A0A1W2PQH9 124 aa6.89□□□□□ -1.31
SSB-210ENST00000474273 DDX3XO00571 662 aaKnown RBP eCLIP6.89□□□□□ -1.31
SSB-210ENST00000474273 B4GALT3O60512 393 aa6.89□□□□□ -1.31
SSB-210ENST00000474273 FZD7O75084 574 aa6.89□□□□□ -1.31
SSB-210ENST00000474273 PPM1BO75688 479 aa6.89□□□□□ -1.31
SSB-210ENST00000474273 ICAM4Q14773 271 aa6.89□□□□□ -1.31
SSB-210ENST00000474273 PPP2R5EQ16537 467 aa6.89□□□□□ -1.31
SSB-210ENST00000474273 GNPTABQ3T906 1256 aa6.89□□□□□ -1.31
SSB-210ENST00000474273 USP51Q70EK9 711 aa6.89□□□□□ -1.31
SSB-210ENST00000474273 VPS37DQ86XT2 251 aa6.89□□□□□ -1.31
SSB-210ENST00000474273 ARHGEF39Q8N4T4 335 aa6.89□□□□□ -1.31
SSB-210ENST00000474273 SHDQ96IW2 340 aa6.89□□□□□ -1.31
SSB-210ENST00000474273 ZNF747Q9BV97 191 aa6.89□□□□□ -1.31
SSB-210ENST00000474273 KLC2Q9H0B6 622 aa6.89□□□□□ -1.31
SSB-210ENST00000474273 PHAXQ9H814 394 aaKnown RBP6.89□□□□□ -1.31
SSB-210ENST00000474273 CD248Q9HCU0 757 aa6.89□□□□□ -1.31
SSB-210ENST00000474273 STRIP2Q9ULQ0 834 aa6.89□□□□□ -1.31
SSB-210ENST00000474273 SGSM2O43147 1006 aa6.88□□□□□ -1.31
SSB-210ENST00000474273 TCF3P15923 654 aa6.88□□□□□ -1.31
SSB-210ENST00000474273 ADAT2Q7Z6V5 191 aaKnown RBP6.88□□□□□ -1.31
SSB-210ENST00000474273 STK32CQ86UX6 486 aa6.88□□□□□ -1.31
SSB-210ENST00000474273 RCC1LQ96I51 464 aaKnown RBP6.88□□□□□ -1.31
SSB-210ENST00000474273 VPS11Q9H270 941 aa6.88□□□□□ -1.31
SSB-210ENST00000474273 EPHX1P07099 455 aa6.87□□□□□ -1.31
SSB-210ENST00000474273 ATF4P18848 351 aaPredicted RBP6.87□□□□□ -1.31
SSB-210ENST00000474273 RBM25P49756 843 aaKnown RBP6.87□□□□□ -1.31
SSB-210ENST00000474273 CASP7P55210 303 aa6.87□□□□□ -1.31
SSB-210ENST00000474273 SLC7A5Q01650 507 aa6.87□□□□□ -1.31
SSB-210ENST00000474273 KRTAP1-1Q07627 177 aa6.87□□□□□ -1.31
SSB-210ENST00000474273 SEC14L1Q92503 715 aa6.87□□□□□ -1.31
SSB-210ENST00000474273 FGD4Q96M96 766 aa6.87□□□□□ -1.31
SSB-210ENST00000474273 CAPN10Q9HC96 672 aa6.87□□□□□ -1.31
SSB-210ENST00000474273 MARCH2Q9P0N8 246 aa6.87□□□□□ -1.31
SSB-210ENST00000474273 PCDHB10Q9UN67 800 aa6.87□□□□□ -1.31
SSB-210ENST00000474273 ZNF28P17035 718 aa6.86□□□□□ -1.31
SSB-210ENST00000474273 GNL2Q13823 731 aaKnown RBP6.86□□□□□ -1.31
SSB-210ENST00000474273 FAM126BQ8IXS8 530 aa6.86□□□□□ -1.31
SSB-210ENST00000474273 DNERQ8NFT8 737 aa6.86□□□□□ -1.31
SSB-210ENST00000474273 DPF3Q92784 378 aa6.86□□□□□ -1.31
SSB-210ENST00000474273 ANAPC16Q96DE5 110 aa6.86□□□□□ -1.31
SSB-210ENST00000474273 MMP19Q99542 508 aa6.86□□□□□ -1.31
SSB-210ENST00000474273 NPEPPSL1A6NEC2 478 aa6.85□□□□□ -1.31
SSB-210ENST00000474273 GPR42O15529 346 aa6.85□□□□□ -1.31
SSB-210ENST00000474273 SLC6A11P48066 632 aa6.85□□□□□ -1.31
SSB-210ENST00000474273 MBLAC2Q68D91 279 aa6.85□□□□□ -1.31
SSB-210ENST00000474273 MBD6Q96DN6 1003 aa6.85□□□□□ -1.31
SSB-210ENST00000474273 PCED1AQ9H1Q7 454 aa6.85□□□□□ -1.31
SSB-210ENST00000474273 NGRNQ9NPE2 291 aaKnown RBP6.85□□□□□ -1.31
SSB-210ENST00000474273 CLEC1BQ9P126 229 aa6.85□□□□□ -1.31
SSB-210ENST00000474273 ADAM9Q13443 819 aa6.84□□□□□ -1.31
SSB-210ENST00000474273 PRAMEF18Q5VWM3 479 aa6.84□□□□□ -1.31
SSB-210ENST00000474273 CIR1Q86X95 450 aaPredicted RBP6.84□□□□□ -1.31
SSB-210ENST00000474273 FAM169BQ8N8A8 192 aa6.84□□□□□ -1.31
SSB-210ENST00000474273 COPS5Q92905 334 aa6.84□□□□□ -1.31
SSB-210ENST00000474273 PODXL2Q9NZ53 605 aa6.84□□□□□ -1.31
SSB-210ENST00000474273 AMHP03971 560 aa6.83□□□□□ -1.32
SSB-210ENST00000474273 CYP1A1P04798 512 aaPredicted RBP6.83□□□□□ -1.32
SSB-210ENST00000474273 THBDP07204 575 aa6.83□□□□□ -1.32
SSB-210ENST00000474273 PLS3P13797 630 aa6.83□□□□□ -1.32
SSB-210ENST00000474273 STAT5AP42229 794 aa6.83□□□□□ -1.32
SSB-210ENST00000474273 EPHB4P54760 987 aa6.83□□□□□ -1.32
SSB-210ENST00000474273 CRB2Q5IJ48 1285 aa6.83□□□□□ -1.32
SSB-210ENST00000474273 PKN3Q6P5Z2 889 aa6.83□□□□□ -1.32
SSB-210ENST00000474273 TEX2Q8IWB9 1127 aa6.83□□□□□ -1.32
SSB-210ENST00000474273 KLHL6Q8WZ60 621 aa6.83□□□□□ -1.32
SSB-210ENST00000474273 SUGT1Q9Y2Z0 365 aa6.83□□□□□ -1.32
SSB-210ENST00000474273 C22orf46C9J442 243 aa6.82□□□□□ -1.32
SSB-210ENST00000474273 SSBP05455 408 aaKnown RBP eCLIP6.82□□□□□ -1.32
SSB-210ENST00000474273 CR1LQ2VPA4 569 aa6.82□□□□□ -1.32
SSB-210ENST00000474273 KIAA1211LQ6NV74 962 aa6.82□□□□□ -1.32
SSB-210ENST00000474273 ZNF585AQ6P3V2 769 aa6.82□□□□□ -1.32
SSB-210ENST00000474273 VHLLQ6RSH7 139 aa6.82□□□□□ -1.32
SSB-210ENST00000474273 MILR1Q7Z6M3 343 aa6.82□□□□□ -1.32
SSB-210ENST00000474273 PALM2Q8IXS6 379 aa6.82□□□□□ -1.32
SSB-210ENST00000474273 YTHDC1Q96MU7 727 aaKnown RBP6.82□□□□□ -1.32
SSB-210ENST00000474273 DEF6Q9H4E7 631 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 154.8 ms