RNA–Protein interactions for RNA: ENST00000474256.1

CDPF1-205, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 3

Gene CDPF1, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-205ENST00000474256 CREB3L3Q68CJ9 461 aa18.3■□□□□ 0.52
CDPF1-205ENST00000474256 CASC1Q6TDU7 716 aa18.3■□□□□ 0.52
CDPF1-205ENST00000474256 VSIG10LQ86VR7 867 aa18.3■□□□□ 0.52
CDPF1-205ENST00000474256 SKAP1Q86WV1 359 aa18.3■□□□□ 0.52
CDPF1-205ENST00000474256 ZNF654Q8IZM8 581 aa18.3■□□□□ 0.52
CDPF1-205ENST00000474256 TMTC2Q8N394 836 aa18.3■□□□□ 0.52
CDPF1-205ENST00000474256 VWCEQ96DN2 955 aa18.3■□□□□ 0.52
CDPF1-205ENST00000474256 TMEM87BQ96K49 555 aa18.3■□□□□ 0.52
CDPF1-205ENST00000474256 SH2B2O14492 632 aaPredicted RBP18.29■□□□□ 0.52
CDPF1-205ENST00000474256 FGBP02675 491 aa18.29■□□□□ 0.52
CDPF1-205ENST00000474256 DNAJB2P25686 324 aa18.29■□□□□ 0.52
CDPF1-205ENST00000474256 KIF5BP33176 963 aa18.29■□□□□ 0.52
CDPF1-205ENST00000474256 FAM47CQ5HY64 1035 aa18.29■□□□□ 0.52
CDPF1-205ENST00000474256 CTCFLQ8NI51 663 aaPredicted RBP18.29■□□□□ 0.52
CDPF1-205ENST00000474256 KAT2BQ92831 832 aa18.29■□□□□ 0.52
CDPF1-205ENST00000474256 MYL10Q9BUA6 226 aa18.29■□□□□ 0.52
CDPF1-205ENST00000474256 SPZ1Q9BXG8 430 aa18.29■□□□□ 0.52
CDPF1-205ENST00000474256 ANO2Q9NQ90 1003 aa18.29■□□□□ 0.52
CDPF1-205ENST00000474256 MRVI1Q9Y6F6 885 aa18.29■□□□□ 0.52
CDPF1-205ENST00000474256 MYCLP12524 364 aaPredicted RBP18.28■□□□□ 0.52
CDPF1-205ENST00000474256 CASTP20810 708 aaKnown RBP18.28■□□□□ 0.52
CDPF1-205ENST00000474256 LIFRP42702 1097 aa18.28■□□□□ 0.52
CDPF1-205ENST00000474256 LAMC2Q13753 1193 aa18.28■□□□□ 0.52
CDPF1-205ENST00000474256 DGKDQ16760 1214 aa18.28■□□□□ 0.52
CDPF1-205ENST00000474256 SESTD1Q86VW0 696 aa18.28■□□□□ 0.52
CDPF1-205ENST00000474256 RPUSD2Q8IZ73 545 aaKnown RBP18.28■□□□□ 0.52
CDPF1-205ENST00000474256 IL31RAQ8NI17 732 aa18.28■□□□□ 0.52
CDPF1-205ENST00000474256 PPP1R13LQ8WUF5 828 aa18.28■□□□□ 0.52
CDPF1-205ENST00000474256 SCLYQ96I15 445 aa18.28■□□□□ 0.52
CDPF1-205ENST00000474256 LZTS2Q9BRK4 669 aa18.28■□□□□ 0.52
CDPF1-205ENST00000474256 CXXC1Q9P0U4 656 aaPredicted RBP18.28■□□□□ 0.52
CDPF1-205ENST00000474256 SCN10AQ9Y5Y9 1956 aa18.28■□□□□ 0.52
CDPF1-205ENST00000474256 GRXCR1A8MXD5 290 aa18.27■□□□□ 0.52
CDPF1-205ENST00000474256 KCNV1Q6PIU1 500 aa18.27■□□□□ 0.52
CDPF1-205ENST00000474256 FCHSD1Q86WN1 690 aa18.27■□□□□ 0.52
CDPF1-205ENST00000474256 PPTC7Q8NI37 304 aa18.27■□□□□ 0.52
CDPF1-205ENST00000474256 TIFAQ96CG3 184 aa18.27■□□□□ 0.52
CDPF1-205ENST00000474256 PBX4Q9BYU1 374 aa18.27■□□□□ 0.52
CDPF1-205ENST00000474256 MTIF3Q9H2K0 278 aaKnown RBP18.27■□□□□ 0.52
CDPF1-205ENST00000474256 FRMPD4Q14CM0 1322 aa18.26■□□□□ 0.51
CDPF1-205ENST00000474256 CCDC69A6NI79 296 aa18.26■□□□□ 0.51
CDPF1-205ENST00000474256 PITPNM1O00562 1244 aa18.26■□□□□ 0.51
CDPF1-205ENST00000474256 TGFB3P10600 412 aa18.26■□□□□ 0.51
CDPF1-205ENST00000474256 HOXD8P13378 290 aaPredicted RBP18.26■□□□□ 0.51
CDPF1-205ENST00000474256 CCND2P30279 289 aa18.26■□□□□ 0.51
CDPF1-205ENST00000474256 GNAQP50148 359 aa18.26■□□□□ 0.51
CDPF1-205ENST00000474256 MYSM1Q5VVJ2 828 aa18.26■□□□□ 0.51
CDPF1-205ENST00000474256 NFXL1Q6ZNB6 911 aa18.26■□□□□ 0.51
CDPF1-205ENST00000474256 OTOP2Q7RTS6 562 aa18.26■□□□□ 0.51
CDPF1-205ENST00000474256 DHX37Q8IY37 1157 aaKnown RBP18.26■□□□□ 0.51
CDPF1-205ENST00000474256 PIBF1Q8WXW3 757 aa18.26■□□□□ 0.51
CDPF1-205ENST00000474256 RRP36Q96EU6 259 aaKnown RBP18.26■□□□□ 0.51
CDPF1-205ENST00000474256 CDH23Q9H251 3354 aa18.25■□□□□ 0.51
CDPF1-205ENST00000474256 PLEKHA8P1O95397 391 aa18.25■□□□□ 0.51
CDPF1-205ENST00000474256 PFKMP08237 780 aa18.25■□□□□ 0.51
CDPF1-205ENST00000474256 CALM1P0DP23 149 aa18.25■□□□□ 0.51
CDPF1-205ENST00000474256 CALM2P0DP24 149 aa18.25■□□□□ 0.51
CDPF1-205ENST00000474256 CALM3P0DP25 149 aa18.25■□□□□ 0.51
CDPF1-205ENST00000474256 PBX2P40425 430 aa18.25■□□□□ 0.51
CDPF1-205ENST00000474256 SP2Q02086 613 aa18.25■□□□□ 0.51
CDPF1-205ENST00000474256 GRIN2CQ14957 1233 aa18.25■□□□□ 0.51
CDPF1-205ENST00000474256 CELF3Q5SZQ8 465 aaKnown RBP18.25■□□□□ 0.51
CDPF1-205ENST00000474256 SRBD1Q8N5C6 995 aaKnown RBP18.25■□□□□ 0.51
CDPF1-205ENST00000474256 MYLIPQ8WY64 445 aa18.25■□□□□ 0.51
CDPF1-205ENST00000474256 CTAGE1Q96RT6 745 aa18.25■□□□□ 0.51
CDPF1-205ENST00000474256 ZNF576Q9H609 170 aa18.25■□□□□ 0.51
CDPF1-205ENST00000474256 HAS3O00219 553 aa18.24■□□□□ 0.51
CDPF1-205ENST00000474256 PPFIA4O75335 1185 aa18.24■□□□□ 0.51
CDPF1-205ENST00000474256 F2P00734 622 aa18.24■□□□□ 0.51
CDPF1-205ENST00000474256 IQCF3P0C7M6 154 aa18.24■□□□□ 0.51
CDPF1-205ENST00000474256 UBA1P22314 1058 aaKnown RBP18.24■□□□□ 0.51
CDPF1-205ENST00000474256 RFC2P35250 354 aa18.24■□□□□ 0.51
CDPF1-205ENST00000474256 CHMP4BP1P59074 171 aa18.24■□□□□ 0.51
CDPF1-205ENST00000474256 PTGISQ16647 500 aa18.24■□□□□ 0.51
CDPF1-205ENST00000474256 RNF20Q5VTR2 975 aa18.24■□□□□ 0.51
CDPF1-205ENST00000474256 ZFP91Q96JP5 570 aaPredicted RBP18.24■□□□□ 0.51
CDPF1-205ENST00000474256 KATNAL1Q9BW62 490 aa18.24■□□□□ 0.51
CDPF1-205ENST00000474256 SEC63Q9UGP8 760 aaKnown RBP18.24■□□□□ 0.51
CDPF1-205ENST00000474256 GTF2IRD1Q9UHL9 959 aa18.24■□□□□ 0.51
CDPF1-205ENST00000474256 NOD1Q9Y239 953 aa18.24■□□□□ 0.51
CDPF1-205ENST00000474256 SLC12A7Q9Y666 1083 aa18.24■□□□□ 0.51
CDPF1-205ENST00000474256 MYH6P13533 1939 aa18.23■□□□□ 0.51
CDPF1-205ENST00000474256 PIK3CDO00329 1044 aa18.23■□□□□ 0.51
CDPF1-205ENST00000474256 MEIS2O14770 477 aa18.23■□□□□ 0.51
CDPF1-205ENST00000474256 STAM2O75886 525 aa18.23■□□□□ 0.51
CDPF1-205ENST00000474256 GGPS1O95749 300 aa18.23■□□□□ 0.51
CDPF1-205ENST00000474256 RXRAP19793 462 aa18.23■□□□□ 0.51
CDPF1-205ENST00000474256 PSEN2P49810 448 aa18.23■□□□□ 0.51
CDPF1-205ENST00000474256 MRPS9P82933 396 aaKnown RBP18.23■□□□□ 0.51
CDPF1-205ENST00000474256 BFSP2Q13515 415 aa18.23■□□□□ 0.51
CDPF1-205ENST00000474256 HSDL1Q3SXM5 330 aa18.23■□□□□ 0.51
CDPF1-205ENST00000474256 TSGA10IPQ3SY00 556 aa18.23■□□□□ 0.51
CDPF1-205ENST00000474256 GDF6Q6KF10 455 aaPredicted RBP18.23■□□□□ 0.51
CDPF1-205ENST00000474256 SGMS1Q86VZ5 419 aa18.23■□□□□ 0.51
CDPF1-205ENST00000474256 CMTR1Q8N1G2 835 aaKnown RBP18.23■□□□□ 0.51
CDPF1-205ENST00000474256 RETREG2Q8NC44 543 aa18.23■□□□□ 0.51
CDPF1-205ENST00000474256 GPKOWQ92917 476 aaPredicted RBP eCLIP18.23■□□□□ 0.51
CDPF1-205ENST00000474256 SPATA33Q96N06 139 aa18.23■□□□□ 0.51
CDPF1-205ENST00000474256 INPP4AQ96PE3 977 aaPredicted RBP18.23■□□□□ 0.51
CDPF1-205ENST00000474256 LRRC2Q9BYS8 371 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms