RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 TBX21Q9UL17 535 aa12.92□□□□□ -0.34
CKS1B-206ENST00000474215 BRPF3Q9ULD4 1205 aa12.92□□□□□ -0.34
CKS1B-206ENST00000474215 RGS20O76081 388 aa12.91□□□□□ -0.34
CKS1B-206ENST00000474215 GH1P01241 217 aa12.91□□□□□ -0.34
CKS1B-206ENST00000474215 CENPBP07199 599 aaPredicted RBP12.91□□□□□ -0.34
CKS1B-206ENST00000474215 ARHGAP1Q07960 439 aa12.91□□□□□ -0.34
CKS1B-206ENST00000474215 SHHQ15465 462 aa12.91□□□□□ -0.34
CKS1B-206ENST00000474215 KCNV1Q6PIU1 500 aa12.91□□□□□ -0.34
CKS1B-206ENST00000474215 TMTC3Q6ZXV5 915 aa12.91□□□□□ -0.34
CKS1B-206ENST00000474215 MICU3Q86XE3 530 aa12.91□□□□□ -0.34
CKS1B-206ENST00000474215 CUL5Q93034 780 aa12.91□□□□□ -0.34
CKS1B-206ENST00000474215 TRPV6Q9H1D0 765 aa12.91□□□□□ -0.34
CKS1B-206ENST00000474215 SNX14Q9Y5W7 946 aa12.91□□□□□ -0.34
CKS1B-206ENST00000474215 hCG_1642624A0A1W2PR95 340 aa12.9□□□□□ -0.34
CKS1B-206ENST00000474215 PIK3CDO00329 1044 aa12.9□□□□□ -0.34
CKS1B-206ENST00000474215 ZBTB43O43298 467 aa12.9□□□□□ -0.34
CKS1B-206ENST00000474215 CCND2P30279 289 aa12.9□□□□□ -0.34
CKS1B-206ENST00000474215 EPHB4P54760 987 aa12.9□□□□□ -0.34
CKS1B-206ENST00000474215 FGD1P98174 961 aa12.9□□□□□ -0.34
CKS1B-206ENST00000474215 FPGSQ05932 587 aa12.9□□□□□ -0.34
CKS1B-206ENST00000474215 LAMC2Q13753 1193 aa12.9□□□□□ -0.34
CKS1B-206ENST00000474215 MFSD5Q6N075 450 aa12.9□□□□□ -0.34
CKS1B-206ENST00000474215 GPR153Q6NV75 609 aa12.9□□□□□ -0.34
CKS1B-206ENST00000474215 USP17L6PQ6QN14 398 aa12.9□□□□□ -0.34
CKS1B-206ENST00000474215 IL31RAQ8NI17 732 aa12.9□□□□□ -0.34
CKS1B-206ENST00000474215 SMARCC2Q8TAQ2 1214 aa12.9□□□□□ -0.34
CKS1B-206ENST00000474215 AFG1LQ8WV93 481 aa12.9□□□□□ -0.34
CKS1B-206ENST00000474215 JAKMIP1Q96N16 626 aaKnown RBP12.9□□□□□ -0.34
CKS1B-206ENST00000474215 RNF39Q9H2S5 420 aa12.9□□□□□ -0.34
CKS1B-206ENST00000474215 PSTPIP2Q9H939 334 aa12.9□□□□□ -0.34
CKS1B-206ENST00000474215 RBM28Q9NW13 759 aaKnown RBP12.9□□□□□ -0.34
CKS1B-206ENST00000474215 MRVI1Q9Y6F6 885 aa12.9□□□□□ -0.34
CKS1B-206ENST00000474215 MYH6P13533 1939 aa12.9□□□□□ -0.35
CKS1B-206ENST00000474215 KLF18A0A0U1RQI7 1052 aa12.89□□□□□ -0.35
CKS1B-206ENST00000474215 MEIS2O14770 477 aa12.89□□□□□ -0.35
CKS1B-206ENST00000474215 EPB41L2O43491 1005 aaKnown RBP12.89□□□□□ -0.35
CKS1B-206ENST00000474215 TGFB3P10600 412 aa12.89□□□□□ -0.35
CKS1B-206ENST00000474215 CPA1P15085 419 aa12.89□□□□□ -0.35
CKS1B-206ENST00000474215 RTN1Q16799 776 aa12.89□□□□□ -0.35
CKS1B-206ENST00000474215 NBPF20Q3BBV1 942 aa12.89□□□□□ -0.35
CKS1B-206ENST00000474215 C9orf50Q5SZB4 431 aa12.89□□□□□ -0.35
CKS1B-206ENST00000474215 BLOC1S2Q6QNY1 142 aa12.89□□□□□ -0.35
CKS1B-206ENST00000474215 DHX37Q8IY37 1157 aaKnown RBP12.89□□□□□ -0.35
CKS1B-206ENST00000474215 EMID1Q96A84 441 aaPredicted RBP12.89□□□□□ -0.35
CKS1B-206ENST00000474215 ALDH8A1Q9H2A2 487 aaPredicted RBP12.89□□□□□ -0.35
CKS1B-206ENST00000474215 BAZ2BQ9UIF8 2168 aaKnown RBP12.88□□□□□ -0.35
CKS1B-206ENST00000474215 LTBP2Q14767 1821 aa12.88□□□□□ -0.35
CKS1B-206ENST00000474215 B4GALT4O60513 344 aa12.88□□□□□ -0.35
CKS1B-206ENST00000474215 STAM2O75886 525 aa12.88□□□□□ -0.35
CKS1B-206ENST00000474215 MMP3P08254 477 aa12.88□□□□□ -0.35
CKS1B-206ENST00000474215 SUPT20HL2P0C7V6 817 aa12.88□□□□□ -0.35
CKS1B-206ENST00000474215 CASTP20810 708 aaKnown RBP12.88□□□□□ -0.35
CKS1B-206ENST00000474215 PSMA5P28066 241 aa12.88□□□□□ -0.35
CKS1B-206ENST00000474215 CYP2C18P33260 490 aa12.88□□□□□ -0.35
CKS1B-206ENST00000474215 RCAN1P53805 252 aa12.88□□□□□ -0.35
CKS1B-206ENST00000474215 MRPS9P82933 396 aaKnown RBP12.88□□□□□ -0.35
CKS1B-206ENST00000474215 FUT2Q10981 343 aa12.88□□□□□ -0.35
CKS1B-206ENST00000474215 DGKDQ16760 1214 aa12.88□□□□□ -0.35
CKS1B-206ENST00000474215 NFRKBQ6P4R8 1299 aa12.88□□□□□ -0.35
CKS1B-206ENST00000474215 Q6ZUG5 572 aa12.88□□□□□ -0.35
CKS1B-206ENST00000474215 TMEM199Q8N511 208 aa12.88□□□□□ -0.35
CKS1B-206ENST00000474215 ZFP91Q96JP5 570 aaPredicted RBP12.88□□□□□ -0.35
CKS1B-206ENST00000474215 PPP1R12CQ9BZL4 782 aa12.88□□□□□ -0.35
CKS1B-206ENST00000474215 HIPK3Q9H422 1215 aa12.88□□□□□ -0.35
CKS1B-206ENST00000474215 V9GY48 417 aaPredicted RBP12.88□□□□□ -0.35
CKS1B-206ENST00000474215 LAMA2P24043 3122 aaKnown RBP12.88□□□□□ -0.35
CKS1B-206ENST00000474215 FRMPD4Q14CM0 1322 aa12.88□□□□□ -0.35
CKS1B-206ENST00000474215 GOLGA8AA7E2F4 631 aa12.87□□□□□ -0.35
CKS1B-206ENST00000474215 GOLGA8BA8MQT2 603 aa12.87□□□□□ -0.35
CKS1B-206ENST00000474215 CSF2RAP15509 400 aa12.87□□□□□ -0.35
CKS1B-206ENST00000474215 RPS6KB1P23443 525 aa12.87□□□□□ -0.35
CKS1B-206ENST00000474215 SP2Q02086 613 aa12.87□□□□□ -0.35
CKS1B-206ENST00000474215 PTPN11Q06124 597 aaPredicted RBP12.87□□□□□ -0.35
CKS1B-206ENST00000474215 APOBRQ0VD83 1088 aa12.87□□□□□ -0.35
CKS1B-206ENST00000474215 PPIGQ13427 754 aaKnown RBP eCLIP12.87□□□□□ -0.35
CKS1B-206ENST00000474215 GNPTABQ3T906 1256 aa12.87□□□□□ -0.35
CKS1B-206ENST00000474215 FAM47CQ5HY64 1035 aa12.87□□□□□ -0.35
CKS1B-206ENST00000474215 CELF3Q5SZQ8 465 aaKnown RBP12.87□□□□□ -0.35
CKS1B-206ENST00000474215 MYSM1Q5VVJ2 828 aa12.87□□□□□ -0.35
CKS1B-206ENST00000474215 PCNX4Q63HM2 1172 aa12.87□□□□□ -0.35
CKS1B-206ENST00000474215 XRRA1Q6P2D8 792 aa12.87□□□□□ -0.35
CKS1B-206ENST00000474215 HEATR3Q7Z4Q2 680 aa12.87□□□□□ -0.35
CKS1B-206ENST00000474215 FBXL16Q8N461 479 aa12.87□□□□□ -0.35
CKS1B-206ENST00000474215 PPTC7Q8NI37 304 aa12.87□□□□□ -0.35
CKS1B-206ENST00000474215 BRF1Q92994 677 aa12.87□□□□□ -0.35
CKS1B-206ENST00000474215 INPP4AQ96PE3 977 aaPredicted RBP12.87□□□□□ -0.35
CKS1B-206ENST00000474215 NOC4LQ9BVI4 516 aaKnown RBP12.87□□□□□ -0.35
CKS1B-206ENST00000474215 USP26Q9BXU7 913 aa12.87□□□□□ -0.35
CKS1B-206ENST00000474215 FAM217BQ9NTX9 383 aaPredicted RBP12.87□□□□□ -0.35
CKS1B-206ENST00000474215 TRMT13Q9NUP7 481 aaKnown RBP12.87□□□□□ -0.35
CKS1B-206ENST00000474215 NAP1L2Q9ULW6 460 aaPredicted RBP12.87□□□□□ -0.35
CKS1B-206ENST00000474215 LAMA3Q16787 3333 aa12.86□□□□□ -0.35
CKS1B-206ENST00000474215 CCDC196A0A1B0GTZ2 297 aa12.86□□□□□ -0.35
CKS1B-206ENST00000474215 SPATA31C2B4DYI2 1134 aa12.86□□□□□ -0.35
CKS1B-206ENST00000474215 PPFIA4O75335 1185 aa12.86□□□□□ -0.35
CKS1B-206ENST00000474215 GGPS1O95749 300 aa12.86□□□□□ -0.35
CKS1B-206ENST00000474215 CDC27P30260 824 aa12.86□□□□□ -0.35
CKS1B-206ENST00000474215 ICAM3P32942 547 aa12.86□□□□□ -0.35
CKS1B-206ENST00000474215 ADD1P35611 737 aaKnown RBP12.86□□□□□ -0.35
CKS1B-206ENST00000474215 CHMP4BP1P59074 171 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms