RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 NOD1Q9Y239 953 aa15.75■□□□□ 0.11
CHD3-209ENST00000473376 EYSQ5T1H1 3165 aa15.75■□□□□ 0.11
CHD3-209ENST00000473376 PRUNE2Q8WUY3 3088 aa15.75■□□□□ 0.11
CHD3-209ENST00000473376 DHX16O60231 1041 aaKnown RBP15.74■□□□□ 0.11
CHD3-209ENST00000473376 EFCAB14O75071 495 aa15.74■□□□□ 0.11
CHD3-209ENST00000473376 STAM2O75886 525 aa15.74■□□□□ 0.11
CHD3-209ENST00000473376 SART3Q15020 963 aaKnown RBP15.74■□□□□ 0.11
CHD3-209ENST00000473376 PTGISQ16647 500 aa15.74■□□□□ 0.11
CHD3-209ENST00000473376 LY6KQ17RY6 165 aa15.74■□□□□ 0.11
CHD3-209ENST00000473376 TMEM67Q5HYA8 995 aa15.74■□□□□ 0.11
CHD3-209ENST00000473376 SEPT14Q6ZU15 432 aa15.74■□□□□ 0.11
CHD3-209ENST00000473376 VSIG10LQ86VR7 867 aa15.74■□□□□ 0.11
CHD3-209ENST00000473376 KAT2BQ92831 832 aa15.74■□□□□ 0.11
CHD3-209ENST00000473376 NKX2-4Q9H2Z4 354 aa15.74■□□□□ 0.11
CHD3-209ENST00000473376 PRDM12Q9H4Q4 367 aa15.74■□□□□ 0.11
CHD3-209ENST00000473376 GTF2IRD1Q9UHL9 959 aa15.74■□□□□ 0.11
CHD3-209ENST00000473376 YBX2Q9Y2T7 364 aaKnown RBP15.74■□□□□ 0.11
CHD3-209ENST00000473376 PCDHA1Q9Y5I3 950 aa15.74■□□□□ 0.11
CHD3-209ENST00000473376 ERICH2A1L162 156 aa15.73■□□□□ 0.11
CHD3-209ENST00000473376 KIF28PB7ZC32 967 aa15.73■□□□□ 0.11
CHD3-209ENST00000473376 HAS3O00219 553 aa15.73■□□□□ 0.11
CHD3-209ENST00000473376 OPLAHO14841 1288 aa15.73■□□□□ 0.11
CHD3-209ENST00000473376 F2P00734 622 aa15.73■□□□□ 0.11
CHD3-209ENST00000473376 CFBP00751 764 aa15.73■□□□□ 0.11
CHD3-209ENST00000473376 SMARCA1P28370 1054 aa15.73■□□□□ 0.11
CHD3-209ENST00000473376 GRM4Q14833 912 aa15.73■□□□□ 0.11
CHD3-209ENST00000473376 PPP2R2DQ66LE6 453 aa15.73■□□□□ 0.11
CHD3-209ENST00000473376 STAG2Q8N3U4 1231 aa15.73■□□□□ 0.11
CHD3-209ENST00000473376 USP38Q8NB14 1042 aa15.73■□□□□ 0.11
CHD3-209ENST00000473376 PDCD2LQ9BRP1 358 aa15.73■□□□□ 0.11
CHD3-209ENST00000473376 TSPYL2Q9H2G4 693 aaPredicted RBP15.73■□□□□ 0.11
CHD3-209ENST00000473376 MRVI1Q9Y6F6 885 aa15.73■□□□□ 0.11
CHD3-209ENST00000473376 ZBBXA8MT70 800 aa15.72■□□□□ 0.11
CHD3-209ENST00000473376 CXCL10P02778 98 aa15.72■□□□□ 0.11
CHD3-209ENST00000473376 CYP21A2P08686 494 aa15.72■□□□□ 0.11
CHD3-209ENST00000473376 GSPT1P15170 499 aaKnown RBP15.72■□□□□ 0.11
CHD3-209ENST00000473376 SELPP16109 830 aa15.72■□□□□ 0.11
CHD3-209ENST00000473376 CHMLP26374 656 aa15.72■□□□□ 0.11
CHD3-209ENST00000473376 TROAPQ12815 778 aa15.72■□□□□ 0.11
CHD3-209ENST00000473376 ADGRE1Q14246 886 aa15.72■□□□□ 0.11
CHD3-209ENST00000473376 NCOA7Q8NI08 942 aa15.72■□□□□ 0.11
CHD3-209ENST00000473376 CTAGE1Q96RT6 745 aa15.72■□□□□ 0.11
CHD3-209ENST00000473376 VAT1LQ9HCJ6 419 aa15.72■□□□□ 0.11
CHD3-209ENST00000473376 THEGQ9P2T0 379 aa15.72■□□□□ 0.11
CHD3-209ENST00000473376 TTC28Q96AY4 2481 aa15.71■□□□□ 0.11
CHD3-209ENST00000473376 PNMA6FA0A0J9YX94 578 aa15.71■□□□□ 0.11
CHD3-209ENST00000473376 EIF2AK2P19525 551 aaKnown RBP15.71■□□□□ 0.11
CHD3-209ENST00000473376 MRPS5P82675 430 aaKnown RBP15.71■□□□□ 0.11
CHD3-209ENST00000473376 PTK7Q13308 1070 aa15.71■□□□□ 0.11
CHD3-209ENST00000473376 CELF3Q5SZQ8 465 aaKnown RBP15.71■□□□□ 0.11
CHD3-209ENST00000473376 MYSM1Q5VVJ2 828 aa15.71■□□□□ 0.11
CHD3-209ENST00000473376 CYB5R4Q7L1T6 521 aa15.71■□□□□ 0.11
CHD3-209ENST00000473376 DEFB128Q7Z7B8 93 aa15.71■□□□□ 0.11
CHD3-209ENST00000473376 DHX37Q8IY37 1157 aaKnown RBP15.71■□□□□ 0.11
CHD3-209ENST00000473376 C7orf31Q8N865 590 aa15.71■□□□□ 0.11
CHD3-209ENST00000473376 ASB2Q96Q27 587 aa15.71■□□□□ 0.11
CHD3-209ENST00000473376 IL25Q9H293 177 aa15.71■□□□□ 0.11
CHD3-209ENST00000473376 VCANP13611 3396 aa15.7■□□□□ 0.1
CHD3-209ENST00000473376 ABHD14A-ACY1A0A1B0GW23 586 aa15.7■□□□□ 0.1
CHD3-209ENST00000473376 GCOM1H8Y6P7 765 aaPredicted RBP15.7■□□□□ 0.1
CHD3-209ENST00000473376 IFIT3O14879 490 aaKnown RBP15.7■□□□□ 0.1
CHD3-209ENST00000473376 SGSM2O43147 1006 aa15.7■□□□□ 0.1
CHD3-209ENST00000473376 PPP1R11O60927 126 aaPredicted RBP15.7■□□□□ 0.1
CHD3-209ENST00000473376 RGS20O76081 388 aa15.7■□□□□ 0.1
CHD3-209ENST00000473376 POLR2MP0CAP2 368 aa15.7■□□□□ 0.1
CHD3-209ENST00000473376 PDE4AP27815 886 aa15.7■□□□□ 0.1
CHD3-209ENST00000473376 RABGGTBP53611 331 aa15.7■□□□□ 0.1
CHD3-209ENST00000473376 PGM5Q15124 567 aa15.7■□□□□ 0.1
CHD3-209ENST00000473376 AAK1Q2M2I8 961 aa15.7■□□□□ 0.1
CHD3-209ENST00000473376 GDF6Q6KF10 455 aaPredicted RBP15.7■□□□□ 0.1
CHD3-209ENST00000473376 XRRA1Q6P2D8 792 aa15.7■□□□□ 0.1
CHD3-209ENST00000473376 LRRC8DQ7L1W4 858 aa15.7■□□□□ 0.1
CHD3-209ENST00000473376 RALYLQ86SE5 291 aaKnown RBP15.7■□□□□ 0.1
CHD3-209ENST00000473376 HERC6Q8IVU3 1022 aa15.7■□□□□ 0.1
CHD3-209ENST00000473376 TMTC2Q8N394 836 aa15.7■□□□□ 0.1
CHD3-209ENST00000473376 MAP4K1Q92918 833 aa15.7■□□□□ 0.1
CHD3-209ENST00000473376 FTOQ9C0B1 505 aaKnown RBP eCLIP15.7■□□□□ 0.1
CHD3-209ENST00000473376 FRMPD4Q14CM0 1322 aa15.69■□□□□ 0.1
CHD3-209ENST00000473376 CAND2O75155 1236 aa15.69■□□□□ 0.1
CHD3-209ENST00000473376 CCND2P30279 289 aa15.69■□□□□ 0.1
CHD3-209ENST00000473376 ICAM3P32942 547 aa15.69■□□□□ 0.1
CHD3-209ENST00000473376 PSEN2P49810 448 aa15.69■□□□□ 0.1
CHD3-209ENST00000473376 MFSD10Q14728 455 aa15.69■□□□□ 0.1
CHD3-209ENST00000473376 WTAPQ15007 396 aa15.69■□□□□ 0.1
CHD3-209ENST00000473376 CNKSR3Q6P9H4 555 aa15.69■□□□□ 0.1
CHD3-209ENST00000473376 CATIPQ7Z7H3 387 aa15.69■□□□□ 0.1
CHD3-209ENST00000473376 TEX2Q8IWB9 1127 aa15.69■□□□□ 0.1
CHD3-209ENST00000473376 LZTS2Q9BRK4 669 aa15.69■□□□□ 0.1
CHD3-209ENST00000473376 PRDM6Q9NQX0 595 aa15.69■□□□□ 0.1
CHD3-209ENST00000473376 LMCD1Q9NZU5 365 aa15.69■□□□□ 0.1
CHD3-209ENST00000473376 HDAC6Q9UBN7 1215 aa15.69■□□□□ 0.1
CHD3-209ENST00000473376 EMSYQ7Z589 1322 aa15.68■□□□□ 0.1
CHD3-209ENST00000473376 KIAA1217Q5T5P2 1943 aa15.68■□□□□ 0.1
CHD3-209ENST00000473376 CHD7Q9P2D1 2997 aa15.68■□□□□ 0.1
CHD3-209ENST00000473376 E7EWF7 191 aa15.68■□□□□ 0.1
CHD3-209ENST00000473376 GTPBP6O43824 516 aaPredicted RBP15.68■□□□□ 0.1
CHD3-209ENST00000473376 CA3P07451 260 aa15.68■□□□□ 0.1
CHD3-209ENST00000473376 CKBP12277 381 aa15.68■□□□□ 0.1
CHD3-209ENST00000473376 IGFBP4P22692 258 aa15.68■□□□□ 0.1
CHD3-209ENST00000473376 HOXC8P31273 242 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms