RNA–Protein interactions for RNA: ENST00000473322.1

CCDC66-215, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 654 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-215ENST00000473322 MSL3P1P0C860 447 aa6.55□□□□□ -1.36
CCDC66-215ENST00000473322 FGFR1P11362 822 aa6.55□□□□□ -1.36
CCDC66-215ENST00000473322 MAPKAPK2P49137 400 aa6.55□□□□□ -1.36
CCDC66-215ENST00000473322 HSP90AA2PQ14568 343 aaPredicted RBP6.55□□□□□ -1.36
CCDC66-215ENST00000473322 CIAPIN1Q6FI81 312 aa6.55□□□□□ -1.36
CCDC66-215ENST00000473322 RNF180Q86T96 592 aa6.55□□□□□ -1.36
CCDC66-215ENST00000473322 FERMT3Q86UX7 667 aa6.55□□□□□ -1.36
CCDC66-215ENST00000473322 PRPF38AQ8NAV1 312 aaKnown RBP6.55□□□□□ -1.36
CCDC66-215ENST00000473322 COPS5Q92905 334 aa6.55□□□□□ -1.36
CCDC66-215ENST00000473322 SGPP1Q9BX95 441 aa6.55□□□□□ -1.36
CCDC66-215ENST00000473322 ARHGEF4Q9NR80 690 aa6.55□□□□□ -1.36
CCDC66-215ENST00000473322 MAGEC2Q9UBF1 373 aaPredicted RBP6.55□□□□□ -1.36
CCDC66-215ENST00000473322 TRAV20A0A0B4J274 112 aa6.54□□□□□ -1.36
CCDC66-215ENST00000473322 A0A1W2PQU0 124 aa6.54□□□□□ -1.36
CCDC66-215ENST00000473322 GSG1L2A8MUP6 293 aa6.54□□□□□ -1.36
CCDC66-215ENST00000473322 NOP56O00567 594 aaKnown RBP6.54□□□□□ -1.36
CCDC66-215ENST00000473322 N4BP3O15049 544 aa6.54□□□□□ -1.36
CCDC66-215ENST00000473322 POU3F2P20265 443 aaPredicted RBP6.54□□□□□ -1.36
CCDC66-215ENST00000473322 DPY19L1Q2PZI1 675 aa6.54□□□□□ -1.36
CCDC66-215ENST00000473322 PAQR3Q6TCH7 311 aa6.54□□□□□ -1.36
CCDC66-215ENST00000473322 RPTNQ6XPR3 784 aa6.54□□□□□ -1.36
CCDC66-215ENST00000473322 EXOC2Q96KP1 924 aa6.54□□□□□ -1.36
CCDC66-215ENST00000473322 IPO9Q96P70 1041 aaKnown RBP6.54□□□□□ -1.36
CCDC66-215ENST00000473322 AARSD1Q9BTE6 412 aaKnown RBP6.54□□□□□ -1.36
CCDC66-215ENST00000473322 CNTD2Q9H8S5 307 aa6.54□□□□□ -1.36
CCDC66-215ENST00000473322 MRPS23Q9Y3D9 190 aaKnown RBP6.54□□□□□ -1.36
CCDC66-215ENST00000473322 A0A1W2PQJ5 194 aa6.53□□□□□ -1.36
CCDC66-215ENST00000473322 NUDT19A8MXV4 375 aa6.53□□□□□ -1.36
CCDC66-215ENST00000473322 PDE8AO60658 829 aa6.53□□□□□ -1.36
CCDC66-215ENST00000473322 MYCLP1P12525 358 aaPredicted RBP6.53□□□□□ -1.36
CCDC66-215ENST00000473322 SUMO1P63165 101 aaKnown RBP6.53□□□□□ -1.36
CCDC66-215ENST00000473322 ODR4Q5SWX8 454 aa6.53□□□□□ -1.36
CCDC66-215ENST00000473322 TRIM59Q8IWR1 403 aa6.53□□□□□ -1.36
CCDC66-215ENST00000473322 PPM1KQ8N3J5 372 aa6.53□□□□□ -1.36
CCDC66-215ENST00000473322 AFAP1L2Q8N4X5 818 aa6.53□□□□□ -1.36
CCDC66-215ENST00000473322 MZB1Q8WU39 189 aa6.53□□□□□ -1.36
CCDC66-215ENST00000473322 MRGPRX3Q96LB0 322 aa6.53□□□□□ -1.36
CCDC66-215ENST00000473322 SIGLEC10Q96LC7 697 aa6.53□□□□□ -1.36
CCDC66-215ENST00000473322 IER2Q9BTL4 223 aa6.53□□□□□ -1.36
CCDC66-215ENST00000473322 CYP26B1Q9NR63 512 aa6.53□□□□□ -1.36
CCDC66-215ENST00000473322 NPHP3-ACAD11A0A0J9YXS1 232 aa6.52□□□□□ -1.37
CCDC66-215ENST00000473322 IRS4O14654 1257 aaPredicted RBP6.52□□□□□ -1.37
CCDC66-215ENST00000473322 NUAK1O60285 661 aa6.52□□□□□ -1.37
CCDC66-215ENST00000473322 KCNH1O95259 989 aa6.52□□□□□ -1.37
CCDC66-215ENST00000473322 DBHP09172 617 aa6.52□□□□□ -1.37
CCDC66-215ENST00000473322 ZSCAN22P10073 491 aaPredicted RBP6.52□□□□□ -1.37
CCDC66-215ENST00000473322 CPEP16870 476 aa6.52□□□□□ -1.37
CCDC66-215ENST00000473322 PAMP19021 973 aa6.52□□□□□ -1.37
CCDC66-215ENST00000473322 PLEKHN1Q494U1 663 aaPredicted RBP6.52□□□□□ -1.37
CCDC66-215ENST00000473322 FBLN7Q53RD9 439 aa6.52□□□□□ -1.37
CCDC66-215ENST00000473322 ZNF385BQ569K4 471 aa6.52□□□□□ -1.37
CCDC66-215ENST00000473322 BICRALQ6AI39 1079 aa6.52□□□□□ -1.37
CCDC66-215ENST00000473322 ZC3H14Q6PJT7 736 aaKnown RBP6.52□□□□□ -1.37
CCDC66-215ENST00000473322 LCNL1Q6ZST4 164 aa6.52□□□□□ -1.37
CCDC66-215ENST00000473322 TMC6Q7Z403 805 aa6.52□□□□□ -1.37
CCDC66-215ENST00000473322 CNOT6Q9ULM6 557 aaKnown RBP6.52□□□□□ -1.37
CCDC66-215ENST00000473322 IRAK3Q9Y616 596 aa6.52□□□□□ -1.37
CCDC66-215ENST00000473322 TRBV23-1A0A0A0MS06 115 aa6.51□□□□□ -1.37
CCDC66-215ENST00000473322 RFXAPO00287 272 aa6.51□□□□□ -1.37
CCDC66-215ENST00000473322 GLI4P10075 376 aa6.51□□□□□ -1.37
CCDC66-215ENST00000473322 CNGA1P29973 690 aa6.51□□□□□ -1.37
CCDC66-215ENST00000473322 CDR1P51861 262 aa6.51□□□□□ -1.37
CCDC66-215ENST00000473322 EPHB3P54753 998 aa6.51□□□□□ -1.37
CCDC66-215ENST00000473322 EPHB1P54762 984 aa6.51□□□□□ -1.37
CCDC66-215ENST00000473322 GTF2IRD2BQ6EKJ0 949 aa6.51□□□□□ -1.37
CCDC66-215ENST00000473322 NECAB2Q7Z6G3 386 aa6.51□□□□□ -1.37
CCDC66-215ENST00000473322 GTF2IRD2Q86UP8 949 aa6.51□□□□□ -1.37
CCDC66-215ENST00000473322 LDHDQ86WU2 507 aa6.51□□□□□ -1.37
CCDC66-215ENST00000473322 AHI1Q8N157 1196 aa6.51□□□□□ -1.37
CCDC66-215ENST00000473322 JDP2Q8WYK2 163 aa6.51□□□□□ -1.37
CCDC66-215ENST00000473322 C8orf48Q96LL4 319 aa6.51□□□□□ -1.37
CCDC66-215ENST00000473322 MMP19Q99542 508 aa6.51□□□□□ -1.37
CCDC66-215ENST00000473322 CDC6Q99741 560 aa6.51□□□□□ -1.37
CCDC66-215ENST00000473322 NKX2-4Q9H2Z4 354 aa6.51□□□□□ -1.37
CCDC66-215ENST00000473322 KCTD3Q9Y597 815 aa6.51□□□□□ -1.37
CCDC66-215ENST00000473322 PCDHA5Q9Y5H7 936 aa6.51□□□□□ -1.37
CCDC66-215ENST00000473322 IRS2Q9Y4H2 1338 aa6.5□□□□□ -1.37
CCDC66-215ENST00000473322 EFCAB14O75071 495 aa6.5□□□□□ -1.37
CCDC66-215ENST00000473322 CDKN1CP49918 316 aaPredicted RBP6.5□□□□□ -1.37
CCDC66-215ENST00000473322 PPP2R2AP63151 447 aa6.5□□□□□ -1.37
CCDC66-215ENST00000473322 SCRN1Q12765 414 aa6.5□□□□□ -1.37
CCDC66-215ENST00000473322 SV2CQ496J9 727 aa6.5□□□□□ -1.37
CCDC66-215ENST00000473322 FOXB2Q5VYV0 432 aa6.5□□□□□ -1.37
CCDC66-215ENST00000473322 CABP7Q86V35 215 aa6.5□□□□□ -1.37
CCDC66-215ENST00000473322 ZNF227Q86WZ6 799 aa6.5□□□□□ -1.37
CCDC66-215ENST00000473322 DDX42Q86XP3 938 aaKnown RBP eCLIP6.5□□□□□ -1.37
CCDC66-215ENST00000473322 IGDCC3Q8IVU1 814 aa6.5□□□□□ -1.37
CCDC66-215ENST00000473322 TMEM151BQ8IW70 566 aa6.5□□□□□ -1.37
CCDC66-215ENST00000473322 LZTR1Q8N653 840 aa6.5□□□□□ -1.37
CCDC66-215ENST00000473322 CCDC140Q96MF4 163 aa6.5□□□□□ -1.37
CCDC66-215ENST00000473322 CCDC194A0A1B0GVG4 234 aa6.49□□□□□ -1.37
CCDC66-215ENST00000473322 PLEKHD1A6NEE1 506 aa6.49□□□□□ -1.37
CCDC66-215ENST00000473322 PLS3P13797 630 aa6.49□□□□□ -1.37
CCDC66-215ENST00000473322 HOXC12P31275 282 aa6.49□□□□□ -1.37
CCDC66-215ENST00000473322 NFKB2Q00653 900 aa6.49□□□□□ -1.37
CCDC66-215ENST00000473322 SSPNQ14714 243 aa6.49□□□□□ -1.37
CCDC66-215ENST00000473322 DHCR24Q15392 516 aa6.49□□□□□ -1.37
CCDC66-215ENST00000473322 BRDTQ58F21 947 aaPredicted RBP6.49□□□□□ -1.37
CCDC66-215ENST00000473322 CT47A1Q5JQC4 288 aaPredicted RBP6.49□□□□□ -1.37
CCDC66-215ENST00000473322 WWC2Q6AWC2 1192 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms