RNA–Protein interactions for RNA: ENST00000473099.1

VPS13D-205, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 461 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-205ENST00000473099 GRPEL1Q9HAV7 217 aa14.47□□□□□ -0.09
VPS13D-205ENST00000473099 HOMER2Q9NSB8 354 aa14.47□□□□□ -0.09
VPS13D-205ENST00000473099 ANO10Q9NW15 660 aa14.47□□□□□ -0.09
VPS13D-205ENST00000473099 LRWD1Q9UFC0 647 aa14.47□□□□□ -0.09
VPS13D-205ENST00000473099 PCDHA12Q9UN75 941 aa14.47□□□□□ -0.09
VPS13D-205ENST00000473099 MYH11P35749 1972 aa14.47□□□□□ -0.09
VPS13D-205ENST00000473099 PFASO15067 1338 aa14.46□□□□□ -0.09
VPS13D-205ENST00000473099 KDM3AQ9Y4C1 1321 aa14.46□□□□□ -0.09
VPS13D-205ENST00000473099 ACTN4O43707 911 aaKnown RBP14.46□□□□□ -0.09
VPS13D-205ENST00000473099 SLC25A27O95847 323 aa14.46□□□□□ -0.09
VPS13D-205ENST00000473099 ITGBL1O95965 494 aaPredicted RBP14.46□□□□□ -0.09
VPS13D-205ENST00000473099 MYL1P05976 194 aa14.46□□□□□ -0.09
VPS13D-205ENST00000473099 TECP42680 631 aa14.46□□□□□ -0.09
VPS13D-205ENST00000473099 HERVK_113P62684 666 aa14.46□□□□□ -0.09
VPS13D-205ENST00000473099 MOGSQ13724 837 aa14.46□□□□□ -0.09
VPS13D-205ENST00000473099 PLS1Q14651 629 aa14.46□□□□□ -0.09
VPS13D-205ENST00000473099 CEP55Q53EZ4 464 aa14.46□□□□□ -0.09
VPS13D-205ENST00000473099 PRR16Q569H4 304 aa14.46□□□□□ -0.09
VPS13D-205ENST00000473099 PCNX4Q63HM2 1172 aa14.46□□□□□ -0.09
VPS13D-205ENST00000473099 USP49Q70CQ1 688 aa14.46□□□□□ -0.09
VPS13D-205ENST00000473099 CABP7Q86V35 215 aa14.46□□□□□ -0.09
VPS13D-205ENST00000473099 PDILTQ8N807 584 aa14.46□□□□□ -0.09
VPS13D-205ENST00000473099 RASSF8Q8NHQ8 419 aa14.46□□□□□ -0.09
VPS13D-205ENST00000473099 DHX58Q96C10 678 aa14.46□□□□□ -0.09
VPS13D-205ENST00000473099 DISC1Q9NRI5 854 aa14.46□□□□□ -0.09
VPS13D-205ENST00000473099 SERTAD1Q9UHV2 236 aa14.46□□□□□ -0.09
VPS13D-205ENST00000473099 SMC2O95347 1197 aa14.45□□□□□ -0.1
VPS13D-205ENST00000473099 BCRP11274 1271 aa14.45□□□□□ -0.1
VPS13D-205ENST00000473099 GJA5P36382 358 aa14.45□□□□□ -0.1
VPS13D-205ENST00000473099 STAT6P42226 847 aa14.45□□□□□ -0.1
VPS13D-205ENST00000473099 SEMA3FQ13275 785 aa14.45□□□□□ -0.1
VPS13D-205ENST00000473099 POSTNQ15063 836 aa14.45□□□□□ -0.1
VPS13D-205ENST00000473099 E2F4Q16254 413 aa14.45□□□□□ -0.1
VPS13D-205ENST00000473099 RRAGBQ5VZM2 374 aa14.45□□□□□ -0.1
VPS13D-205ENST00000473099 KRT79Q5XKE5 535 aa14.45□□□□□ -0.1
VPS13D-205ENST00000473099 NSMFQ6X4W1 530 aa14.45□□□□□ -0.1
VPS13D-205ENST00000473099 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.45□□□□□ -0.1
VPS13D-205ENST00000473099 KCTD17Q8N5Z5 321 aa14.45□□□□□ -0.1
VPS13D-205ENST00000473099 ETNPPLQ8TBG4 499 aa14.45□□□□□ -0.1
VPS13D-205ENST00000473099 HAS1Q92839 578 aa14.45□□□□□ -0.1
VPS13D-205ENST00000473099 LENG9Q96B70 501 aa14.45□□□□□ -0.1
VPS13D-205ENST00000473099 TUBE1Q9UJT0 475 aa14.45□□□□□ -0.1
VPS13D-205ENST00000473099 PCNTO95613 3336 aa14.45□□□□□ -0.1
VPS13D-205ENST00000473099 DOCK5Q9H7D0 1870 aa14.44□□□□□ -0.1
VPS13D-205ENST00000473099 LRRC37A2A6NM11 1700 aa14.44□□□□□ -0.1
VPS13D-205ENST00000473099 MCM3APO60318 1980 aa14.44□□□□□ -0.1
VPS13D-205ENST00000473099 IGLV3-22A0A075B6J6 115 aa14.44□□□□□ -0.1
VPS13D-205ENST00000473099 FAM86B1E9PN63 330 aa14.44□□□□□ -0.1
VPS13D-205ENST00000473099 STAM2O75886 525 aa14.44□□□□□ -0.1
VPS13D-205ENST00000473099 FAM86B2P0C5J1 330 aa14.44□□□□□ -0.1
VPS13D-205ENST00000473099 UVSSAQ2YD98 709 aa14.44□□□□□ -0.1
VPS13D-205ENST00000473099 SPRYD7Q5W111 196 aa14.44□□□□□ -0.1
VPS13D-205ENST00000473099 HAUS3Q68CZ6 603 aa14.44□□□□□ -0.1
VPS13D-205ENST00000473099 GPAT2Q6NUI2 795 aa14.44□□□□□ -0.1
VPS13D-205ENST00000473099 ANKRD23Q86SG2 305 aa14.44□□□□□ -0.1
VPS13D-205ENST00000473099 PLA2G4DQ86XP0 818 aa14.44□□□□□ -0.1
VPS13D-205ENST00000473099 TRIML1Q8N9V2 468 aa14.44□□□□□ -0.1
VPS13D-205ENST00000473099 ERMNQ8TAM6 284 aa14.44□□□□□ -0.1
VPS13D-205ENST00000473099 CDK5RAP3Q96JB5 506 aa14.44□□□□□ -0.1
VPS13D-205ENST00000473099 MXRA8Q9BRK3 442 aa14.44□□□□□ -0.1
VPS13D-205ENST00000473099 NAT10Q9H0A0 1025 aaKnown RBP14.44□□□□□ -0.1
VPS13D-205ENST00000473099 SPATC1LQ9H0A9 340 aa14.44□□□□□ -0.1
VPS13D-205ENST00000473099 NT5C3AQ9H0P0 336 aa14.44□□□□□ -0.1
VPS13D-205ENST00000473099 STK17AQ9UEE5 414 aa14.44□□□□□ -0.1
VPS13D-205ENST00000473099 RIPK3Q9Y572 518 aa14.44□□□□□ -0.1
VPS13D-205ENST00000473099 A0A087X0B3 334 aa14.43□□□□□ -0.1
VPS13D-205ENST00000473099 B4DLN1 442 aa14.43□□□□□ -0.1
VPS13D-205ENST00000473099 MEIS1O00470 390 aa14.43□□□□□ -0.1
VPS13D-205ENST00000473099 CCND2P30279 289 aa14.43□□□□□ -0.1
VPS13D-205ENST00000473099 MDM2Q00987 491 aaPredicted RBP14.43□□□□□ -0.1
VPS13D-205ENST00000473099 FMR1Q06787 632 aaKnown RBP eCLIP14.43□□□□□ -0.1
VPS13D-205ENST00000473099 BAATQ14032 418 aaPredicted RBP14.43□□□□□ -0.1
VPS13D-205ENST00000473099 NT5DC1Q5TFE4 455 aa14.43□□□□□ -0.1
VPS13D-205ENST00000473099 ARHGEF16Q5VV41 709 aa14.43□□□□□ -0.1
VPS13D-205ENST00000473099 SLC30A10Q6XR72 485 aa14.43□□□□□ -0.1
VPS13D-205ENST00000473099 SH3RF1Q7Z6J0 888 aa14.43□□□□□ -0.1
VPS13D-205ENST00000473099 DNERQ8NFT8 737 aa14.43□□□□□ -0.1
VPS13D-205ENST00000473099 FAM200AQ8TCP9 573 aa14.43□□□□□ -0.1
VPS13D-205ENST00000473099 NSUN6Q8TEA1 469 aaKnown RBP14.43□□□□□ -0.1
VPS13D-205ENST00000473099 ANP32BQ92688 251 aaKnown RBP14.43□□□□□ -0.1
VPS13D-205ENST00000473099 SMARCE1Q969G3 411 aa14.43□□□□□ -0.1
VPS13D-205ENST00000473099 RMDN3Q96TC7 470 aa14.43□□□□□ -0.1
VPS13D-205ENST00000473099 PANK2Q9BZ23 570 aa14.43□□□□□ -0.1
VPS13D-205ENST00000473099 WDR11Q9BZH6 1224 aa14.43□□□□□ -0.1
VPS13D-205ENST00000473099 PXMP2Q9NR77 195 aa14.43□□□□□ -0.1
VPS13D-205ENST00000473099 CYP39A1Q9NYL5 469 aa14.43□□□□□ -0.1
VPS13D-205ENST00000473099 BTBD7Q9P203 1132 aa14.43□□□□□ -0.1
VPS13D-205ENST00000473099 COL20A1Q9P218 1284 aa14.43□□□□□ -0.1
VPS13D-205ENST00000473099 CCL15-CCL14A0A0B4J2E2 113 aa14.42□□□□□ -0.1
VPS13D-205ENST00000473099 MSH4O15457 936 aa14.42□□□□□ -0.1
VPS13D-205ENST00000473099 MAFGO15525 162 aa14.42□□□□□ -0.1
VPS13D-205ENST00000473099 GTPBP6O43824 516 aaPredicted RBP14.42□□□□□ -0.1
VPS13D-205ENST00000473099 GCLCP48506 637 aaPredicted RBP14.42□□□□□ -0.1
VPS13D-205ENST00000473099 HUNKP57058 714 aa14.42□□□□□ -0.1
VPS13D-205ENST00000473099 NLRP12P59046 1061 aa14.42□□□□□ -0.1
VPS13D-205ENST00000473099 AMPD3Q01432 767 aa14.42□□□□□ -0.1
VPS13D-205ENST00000473099 KARSQ15046 597 aaKnown RBP14.42□□□□□ -0.1
VPS13D-205ENST00000473099 PGM5Q15124 567 aa14.42□□□□□ -0.1
VPS13D-205ENST00000473099 CCL15Q16663 113 aa14.42□□□□□ -0.1
VPS13D-205ENST00000473099 HYIQ5T013 277 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms