RNA–Protein interactions for RNA: ENST00000473079.1

EPHB3-202, Transcript of EPH receptor B3, humanhuman

TSL 2

Gene EPHB3, Length 486 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-202ENST00000473079 PSRC1Q6PGN9 363 aaPredicted RBP24.02■■□□□ 1.44
EPHB3-202ENST00000473079 NFXL1Q6ZNB6 911 aa24.02■■□□□ 1.44
EPHB3-202ENST00000473079 SGMS1Q86VZ5 419 aa24.02■■□□□ 1.44
EPHB3-202ENST00000473079 AFG1LQ8WV93 481 aa24.02■■□□□ 1.44
EPHB3-202ENST00000473079 RRP36Q96EU6 259 aaKnown RBP24.02■■□□□ 1.44
EPHB3-202ENST00000473079 MYL10Q9BUA6 226 aa24.02■■□□□ 1.44
EPHB3-202ENST00000473079 IL23AQ9NPF7 189 aa24.02■■□□□ 1.44
EPHB3-202ENST00000473079 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.01■■□□□ 1.43
EPHB3-202ENST00000473079 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.01■■□□□ 1.43
EPHB3-202ENST00000473079 RGS20O76081 388 aa24.01■■□□□ 1.43
EPHB3-202ENST00000473079 MMP3P08254 477 aa24.01■■□□□ 1.43
EPHB3-202ENST00000473079 TGFB3P10600 412 aa24.01■■□□□ 1.43
EPHB3-202ENST00000473079 LAMC2Q13753 1193 aa24.01■■□□□ 1.43
EPHB3-202ENST00000473079 ZNF697Q5TEC3 545 aa24.01■■□□□ 1.43
EPHB3-202ENST00000473079 TRMT13Q9NUP7 481 aaKnown RBP24.01■■□□□ 1.43
EPHB3-202ENST00000473079 MRVI1Q9Y6F6 885 aa24.01■■□□□ 1.43
EPHB3-202ENST00000473079 MYCLP12524 364 aaPredicted RBP24■■□□□ 1.43
EPHB3-202ENST00000473079 CASTP20810 708 aaKnown RBP24■■□□□ 1.43
EPHB3-202ENST00000473079 ZNF365Q70YC5 407 aa24■■□□□ 1.43
EPHB3-202ENST00000473079 SRBD1Q8N5C6 995 aaKnown RBP24■■□□□ 1.43
EPHB3-202ENST00000473079 CCDC136Q96JN2 1154 aa24■■□□□ 1.43
EPHB3-202ENST00000473079 NEK1Q96PY6 1258 aa24■■□□□ 1.43
EPHB3-202ENST00000473079 SLC12A7Q9Y666 1083 aa24■■□□□ 1.43
EPHB3-202ENST00000473079 UMODL1Q5DID0 1318 aa24■■□□□ 1.43
EPHB3-202ENST00000473079 TMEM265A0A087WTH1 108 aa23.99■■□□□ 1.43
EPHB3-202ENST00000473079 CCND2P30279 289 aa23.99■■□□□ 1.43
EPHB3-202ENST00000473079 GUCD1Q96NT3 240 aa23.99■■□□□ 1.43
EPHB3-202ENST00000473079 WNT8AQ9H1J5 351 aa23.99■■□□□ 1.43
EPHB3-202ENST00000473079 SEMA6BQ9H3T3 888 aa23.99■■□□□ 1.43
EPHB3-202ENST00000473079 SEC63Q9UGP8 760 aaKnown RBP23.99■■□□□ 1.43
EPHB3-202ENST00000473079 SCN10AQ9Y5Y9 1956 aa23.99■■□□□ 1.43
EPHB3-202ENST00000473079 FRMPD4Q14CM0 1322 aa23.99■■□□□ 1.43
EPHB3-202ENST00000473079 KIAA1217Q5T5P2 1943 aa23.98■■□□□ 1.43
EPHB3-202ENST00000473079 PIK3CDO00329 1044 aa23.98■■□□□ 1.43
EPHB3-202ENST00000473079 STAM2O75886 525 aa23.98■■□□□ 1.43
EPHB3-202ENST00000473079 PLEKHA8P1O95397 391 aa23.98■■□□□ 1.43
EPHB3-202ENST00000473079 ACRP10323 421 aa23.98■■□□□ 1.43
EPHB3-202ENST00000473079 EXOSC10Q01780 885 aaKnown RBP23.98■■□□□ 1.43
EPHB3-202ENST00000473079 DGKDQ16760 1214 aa23.98■■□□□ 1.43
EPHB3-202ENST00000473079 FAM47CQ5HY64 1035 aa23.98■■□□□ 1.43
EPHB3-202ENST00000473079 SESTD1Q86VW0 696 aa23.98■■□□□ 1.43
EPHB3-202ENST00000473079 FCHSD1Q86WN1 690 aa23.98■■□□□ 1.43
EPHB3-202ENST00000473079 DHX37Q8IY37 1157 aaKnown RBP23.98■■□□□ 1.43
EPHB3-202ENST00000473079 RPUSD2Q8IZ73 545 aaKnown RBP23.98■■□□□ 1.43
EPHB3-202ENST00000473079 FANCBQ8NB91 859 aa23.98■■□□□ 1.43
EPHB3-202ENST00000473079 IL31RAQ8NI17 732 aa23.98■■□□□ 1.43
EPHB3-202ENST00000473079 PPTC7Q8NI37 304 aa23.98■■□□□ 1.43
EPHB3-202ENST00000473079 PIBF1Q8WXW3 757 aa23.98■■□□□ 1.43
EPHB3-202ENST00000473079 HERVK_113Q902F9 699 aa23.98■■□□□ 1.43
EPHB3-202ENST00000473079 FGBP02675 491 aa23.97■■□□□ 1.43
EPHB3-202ENST00000473079 HOXD8P13378 290 aaPredicted RBP23.97■■□□□ 1.43
EPHB3-202ENST00000473079 CCL23P55773 120 aa23.97■■□□□ 1.43
EPHB3-202ENST00000473079 MYSM1Q5VVJ2 828 aa23.97■■□□□ 1.43
EPHB3-202ENST00000473079 KAT2BQ92831 832 aa23.97■■□□□ 1.43
EPHB3-202ENST00000473079 PPFIA4O75335 1185 aa23.96■■□□□ 1.43
EPHB3-202ENST00000473079 CYP2C9P11712 490 aa23.96■■□□□ 1.43
EPHB3-202ENST00000473079 KRT32Q14532 448 aa23.96■■□□□ 1.43
EPHB3-202ENST00000473079 CELF3Q5SZQ8 465 aaKnown RBP23.96■■□□□ 1.43
EPHB3-202ENST00000473079 DHX32Q7L7V1 743 aaKnown RBP23.96■■□□□ 1.43
EPHB3-202ENST00000473079 RASEFQ8IZ41 740 aa23.96■■□□□ 1.43
EPHB3-202ENST00000473079 LRRC2Q9BYS8 371 aa23.96■■□□□ 1.43
EPHB3-202ENST00000473079 COL6A3P12111 3177 aa23.95■■□□□ 1.43
EPHB3-202ENST00000473079 PITPNM1O00562 1244 aa23.95■■□□□ 1.42
EPHB3-202ENST00000473079 RXRAP19793 462 aa23.95■■□□□ 1.42
EPHB3-202ENST00000473079 XRRA1Q6P2D8 792 aa23.95■■□□□ 1.42
EPHB3-202ENST00000473079 SYNE3Q6ZMZ3 975 aa23.95■■□□□ 1.42
EPHB3-202ENST00000473079 CUL5Q93034 780 aa23.95■■□□□ 1.42
EPHB3-202ENST00000473079 VWCEQ96DN2 955 aa23.95■■□□□ 1.42
EPHB3-202ENST00000473079 FAM161BQ96MY7 647 aa23.95■■□□□ 1.42
EPHB3-202ENST00000473079 MTIF3Q9H2K0 278 aaKnown RBP23.95■■□□□ 1.42
EPHB3-202ENST00000473079 TTYH1Q9H313 450 aaPredicted RBP23.95■■□□□ 1.42
EPHB3-202ENST00000473079 BAZ2BQ9UIF8 2168 aaKnown RBP23.95■■□□□ 1.42
EPHB3-202ENST00000473079 MEIS2O14770 477 aa23.94■■□□□ 1.42
EPHB3-202ENST00000473079 PFKMP08237 780 aa23.94■■□□□ 1.42
EPHB3-202ENST00000473079 ICAM3P32942 547 aa23.94■■□□□ 1.42
EPHB3-202ENST00000473079 MRPS9P82933 396 aaKnown RBP23.94■■□□□ 1.42
EPHB3-202ENST00000473079 SP2Q02086 613 aa23.94■■□□□ 1.42
EPHB3-202ENST00000473079 GNPTABQ3T906 1256 aa23.94■■□□□ 1.42
EPHB3-202ENST00000473079 TMTC3Q6ZXV5 915 aa23.94■■□□□ 1.42
EPHB3-202ENST00000473079 CMTR1Q8N1G2 835 aaKnown RBP23.94■■□□□ 1.42
EPHB3-202ENST00000473079 KCNB2Q92953 911 aa23.94■■□□□ 1.42
EPHB3-202ENST00000473079 INPP4AQ96PE3 977 aaPredicted RBP23.94■■□□□ 1.42
EPHB3-202ENST00000473079 KATNAL1Q9BW62 490 aa23.94■■□□□ 1.42
EPHB3-202ENST00000473079 HAS3O00219 553 aa23.93■■□□□ 1.42
EPHB3-202ENST00000473079 GGPS1O95749 300 aa23.93■■□□□ 1.42
EPHB3-202ENST00000473079 F2P00734 622 aa23.93■■□□□ 1.42
EPHB3-202ENST00000473079 HMGB1P09429 215 aaKnown RBP23.93■■□□□ 1.42
EPHB3-202ENST00000473079 UBA1P22314 1058 aaKnown RBP23.93■■□□□ 1.42
EPHB3-202ENST00000473079 DNAJB2P25686 324 aa23.93■■□□□ 1.42
EPHB3-202ENST00000473079 RFC2P35250 354 aa23.93■■□□□ 1.42
EPHB3-202ENST00000473079 APOA5Q6Q788 366 aa23.93■■□□□ 1.42
EPHB3-202ENST00000473079 USP17L6PQ6QN14 398 aa23.93■■□□□ 1.42
EPHB3-202ENST00000473079 SMARCC2Q8TAQ2 1214 aa23.93■■□□□ 1.42
EPHB3-202ENST00000473079 SCLYQ96I15 445 aa23.93■■□□□ 1.42
EPHB3-202ENST00000473079 CDX2Q99626 313 aaPredicted RBP23.93■■□□□ 1.42
EPHB3-202ENST00000473079 BFSP2Q13515 415 aa23.92■■□□□ 1.42
EPHB3-202ENST00000473079 PTGISQ16647 500 aa23.92■■□□□ 1.42
EPHB3-202ENST00000473079 ADCK5Q3MIX3 580 aa23.92■■□□□ 1.42
EPHB3-202ENST00000473079 HSDL1Q3SXM5 330 aa23.92■■□□□ 1.42
EPHB3-202ENST00000473079 PCNX4Q63HM2 1172 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms