RNA–Protein interactions for RNA: ENST00000472991.5

SMC4-214, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-214ENST00000472991 GRB14Q14449 540 aa10.52□□□□□ -0.73
SMC4-214ENST00000472991 TKFCQ3LXA3 575 aa10.52□□□□□ -0.73
SMC4-214ENST00000472991 MUM1L1Q5H9M0 696 aa10.52□□□□□ -0.73
SMC4-214ENST00000472991 FBXO11Q86XK2 927 aa10.52□□□□□ -0.73
SMC4-214ENST00000472991 CHST13Q8NET6 341 aa10.52□□□□□ -0.73
SMC4-214ENST00000472991 SOCS4Q8WXH5 440 aa10.52□□□□□ -0.73
SMC4-214ENST00000472991 RRP36Q96EU6 259 aaKnown RBP10.52□□□□□ -0.73
SMC4-214ENST00000472991 ZNF274Q96GC6 653 aaPredicted RBP10.52□□□□□ -0.73
SMC4-214ENST00000472991 TRERF1Q96PN7 1200 aa10.52□□□□□ -0.73
SMC4-214ENST00000472991 MMP19Q99542 508 aa10.52□□□□□ -0.73
SMC4-214ENST00000472991 NUDT12Q9BQG2 462 aa10.52□□□□□ -0.73
SMC4-214ENST00000472991 ACAD9Q9H845 621 aa10.52□□□□□ -0.73
SMC4-214ENST00000472991 FBXO40Q9UH90 709 aa10.52□□□□□ -0.73
SMC4-214ENST00000472991 PTPN22Q9Y2R2 807 aa10.52□□□□□ -0.73
SMC4-214ENST00000472991 PTCH2Q9Y6C5 1203 aa10.52□□□□□ -0.73
SMC4-214ENST00000472991 MYH7BA7E2Y1 1941 aa10.52□□□□□ -0.73
SMC4-214ENST00000472991 PNMA6FA0A0J9YX94 578 aa10.51□□□□□ -0.73
SMC4-214ENST00000472991 CCDC196A0A1B0GTZ2 297 aa10.51□□□□□ -0.73
SMC4-214ENST00000472991 SLC15A5A6NIM6 579 aa10.51□□□□□ -0.73
SMC4-214ENST00000472991 STRNO43815 780 aa10.51□□□□□ -0.73
SMC4-214ENST00000472991 FCER1AP12319 257 aa10.51□□□□□ -0.73
SMC4-214ENST00000472991 ADORA2AP29274 412 aa10.51□□□□□ -0.73
SMC4-214ENST00000472991 RGS2P41220 211 aa10.51□□□□□ -0.73
SMC4-214ENST00000472991 PRMT2P55345 433 aa10.51□□□□□ -0.73
SMC4-214ENST00000472991 KCTD2Q14681 263 aa10.51□□□□□ -0.73
SMC4-214ENST00000472991 PPP2R5BQ15173 497 aa10.51□□□□□ -0.73
SMC4-214ENST00000472991 ME3Q16798 604 aa10.51□□□□□ -0.73
SMC4-214ENST00000472991 COL13A1Q5TAT6 717 aaPredicted RBP10.51□□□□□ -0.73
SMC4-214ENST00000472991 FBXO46Q6PJ61 603 aaPredicted RBP10.51□□□□□ -0.73
SMC4-214ENST00000472991 KRI1Q8N9T8 703 aaKnown RBP10.51□□□□□ -0.73
SMC4-214ENST00000472991 RAET1EQ8TD07 263 aa10.51□□□□□ -0.73
SMC4-214ENST00000472991 AMNQ9BXJ7 453 aa10.51□□□□□ -0.73
SMC4-214ENST00000472991 MCOLN1Q9GZU1 580 aa10.51□□□□□ -0.73
SMC4-214ENST00000472991 SEC63Q9UGP8 760 aaKnown RBP10.51□□□□□ -0.73
SMC4-214ENST00000472991 GJD2Q9UKL4 321 aa10.51□□□□□ -0.73
SMC4-214ENST00000472991 PNMA2Q9UL42 364 aa10.51□□□□□ -0.73
SMC4-214ENST00000472991 ABCB11O95342 1321 aa10.51□□□□□ -0.73
SMC4-214ENST00000472991 NFIBO00712 420 aa10.5□□□□□ -0.73
SMC4-214ENST00000472991 PFKFB2O60825 505 aa10.5□□□□□ -0.73
SMC4-214ENST00000472991 PPFIA3O75145 1194 aa10.5□□□□□ -0.73
SMC4-214ENST00000472991 PGK2P07205 417 aa10.5□□□□□ -0.73
SMC4-214ENST00000472991 CYP2B6P20813 491 aa10.5□□□□□ -0.73
SMC4-214ENST00000472991 SCRN1Q12765 414 aa10.5□□□□□ -0.73
SMC4-214ENST00000472991 NTRK3Q16288 839 aa10.5□□□□□ -0.73
SMC4-214ENST00000472991 ZNF787Q6DD87 383 aa10.5□□□□□ -0.73
SMC4-214ENST00000472991 NSMFQ6X4W1 530 aa10.5□□□□□ -0.73
SMC4-214ENST00000472991 ABRAQ8N0Z2 381 aa10.5□□□□□ -0.73
SMC4-214ENST00000472991 ANKRD35Q8N283 1001 aa10.5□□□□□ -0.73
SMC4-214ENST00000472991 USP6NLQ92738 828 aa10.5□□□□□ -0.73
SMC4-214ENST00000472991 PHKBQ93100 1093 aa10.5□□□□□ -0.73
SMC4-214ENST00000472991 APBA2Q99767 749 aa10.5□□□□□ -0.73
SMC4-214ENST00000472991 SLKQ9H2G2 1235 aaPredicted RBP10.5□□□□□ -0.73
SMC4-214ENST00000472991 A1CFQ9NQ94 594 aaKnown RBP10.5□□□□□ -0.73
SMC4-214ENST00000472991 TOR4AQ9NXH8 423 aa10.5□□□□□ -0.73
SMC4-214ENST00000472991 PCDHA1Q9Y5I3 950 aa10.5□□□□□ -0.73
SMC4-214ENST00000472991 DOCK5Q9H7D0 1870 aa10.5□□□□□ -0.73
SMC4-214ENST00000472991 PTPDC1A2A3K4 754 aa10.49□□□□□ -0.73
SMC4-214ENST00000472991 CPLX1O14810 134 aa10.49□□□□□ -0.73
SMC4-214ENST00000472991 ZBTB24O43167 697 aaPredicted RBP10.49□□□□□ -0.73
SMC4-214ENST00000472991 ADCY3O60266 1144 aa10.49□□□□□ -0.73
SMC4-214ENST00000472991 COBLO75128 1261 aa10.49□□□□□ -0.73
SMC4-214ENST00000472991 ELNP15502 786 aa10.49□□□□□ -0.73
SMC4-214ENST00000472991 IFNAR1P17181 557 aa10.49□□□□□ -0.73
SMC4-214ENST00000472991 IRF5Q13568 498 aa10.49□□□□□ -0.73
SMC4-214ENST00000472991 PKN2Q16513 984 aaKnown RBP10.49□□□□□ -0.73
SMC4-214ENST00000472991 CCL14Q16627 93 aa10.49□□□□□ -0.73
SMC4-214ENST00000472991 DPP9Q86TI2 863 aa10.49□□□□□ -0.73
SMC4-214ENST00000472991 NECAB1Q8N987 351 aa10.49□□□□□ -0.73
SMC4-214ENST00000472991 NPLOC4Q8TAT6 608 aa10.49□□□□□ -0.73
SMC4-214ENST00000472991 CLEC4DQ8WXI8 215 aa10.49□□□□□ -0.73
SMC4-214ENST00000472991 GPKOWQ92917 476 aaPredicted RBP eCLIP10.49□□□□□ -0.734e-13■□□□□ 10.3
SMC4-214ENST00000472991 GTF3C6Q969F1 213 aa10.49□□□□□ -0.73
SMC4-214ENST00000472991 DDX11Q96FC9 970 aa10.49□□□□□ -0.73
SMC4-214ENST00000472991 SLC26A6Q9BXS9 759 aa10.49□□□□□ -0.73
SMC4-214ENST00000472991 LIMCH1Q9UPQ0 1083 aa10.49□□□□□ -0.73
SMC4-214ENST00000472991 MRPL11Q9Y3B7 192 aaKnown RBP10.49□□□□□ -0.73
SMC4-214ENST00000472991 PFASO15067 1338 aa10.49□□□□□ -0.73
SMC4-214ENST00000472991 KIAA0100Q14667 2235 aaKnown RBP10.49□□□□□ -0.73
SMC4-214ENST00000472991 DNAJC25-GNG10A0A024R161 153 aa10.48□□□□□ -0.73
SMC4-214ENST00000472991 OPLAHO14841 1288 aa10.48□□□□□ -0.73
SMC4-214ENST00000472991 DTNBO60941 627 aa10.48□□□□□ -0.73
SMC4-214ENST00000472991 HOXC6P09630 235 aa10.48□□□□□ -0.73
SMC4-214ENST00000472991 GRK4P32298 578 aa10.48□□□□□ -0.73
SMC4-214ENST00000472991 SSTR3P32745 418 aaPredicted RBP10.48□□□□□ -0.73
SMC4-214ENST00000472991 AKAP17AQ02040 695 aaKnown RBP10.48□□□□□ -0.73
SMC4-214ENST00000472991 CNTN2Q02246 1040 aa10.48□□□□□ -0.73
SMC4-214ENST00000472991 ST3GAL1Q11201 340 aa10.48□□□□□ -0.73
SMC4-214ENST00000472991 TRAF1Q13077 416 aa10.48□□□□□ -0.73
SMC4-214ENST00000472991 AMHR2Q16671 573 aa10.48□□□□□ -0.73
SMC4-214ENST00000472991 WWC2Q6AWC2 1192 aa10.48□□□□□ -0.73
SMC4-214ENST00000472991 CPLX2Q6PUV4 134 aaKnown RBP10.48□□□□□ -0.73
SMC4-214ENST00000472991 SLC30A10Q6XR72 485 aa10.48□□□□□ -0.73
SMC4-214ENST00000472991 RNF207Q6ZRF8 634 aa10.48□□□□□ -0.73
SMC4-214ENST00000472991 HEATR3Q7Z4Q2 680 aa10.48□□□□□ -0.73
SMC4-214ENST00000472991 SH3TC2Q8TF17 1288 aa10.48□□□□□ -0.73
SMC4-214ENST00000472991 TRIB2Q92519 343 aa10.48□□□□□ -0.73
SMC4-214ENST00000472991 TBC1D5Q92609 795 aa10.48□□□□□ -0.73
SMC4-214ENST00000472991 RNF26Q9BY78 433 aaPredicted RBP10.48□□□□□ -0.73
SMC4-214ENST00000472991 CYP39A1Q9NYL5 469 aa10.48□□□□□ -0.73
SMC4-214ENST00000472991 PRPF3O43395 683 aaKnown RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms