RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 TTLL4Q14679 1199 aa23.78■■□□□ 1.4
TOP3A-204ENST00000472959 DUSP28Q4G0W2 176 aa23.78■■□□□ 1.4
TOP3A-204ENST00000472959 SEPT14Q6ZU15 432 aa23.78■■□□□ 1.4
TOP3A-204ENST00000472959 DAGLBQ8NCG7 672 aa23.78■■□□□ 1.4
TOP3A-204ENST00000472959 ANO3Q9BYT9 981 aa23.78■■□□□ 1.4
TOP3A-204ENST00000472959 XPNPEP3Q9NQH7 507 aa23.78■■□□□ 1.4
TOP3A-204ENST00000472959 Q9Y3F1 56 aa23.78■■□□□ 1.4
TOP3A-204ENST00000472959 NKRFO15226 690 aaKnown RBP eCLIP23.77■■□□□ 1.4
TOP3A-204ENST00000472959 DTNBO60941 627 aa23.77■■□□□ 1.4
TOP3A-204ENST00000472959 SMPD1P17405 629 aa23.77■■□□□ 1.4
TOP3A-204ENST00000472959 MRPS9P82933 396 aaKnown RBP23.77■■□□□ 1.4
TOP3A-204ENST00000472959 JAKMIP3Q5VZ66 844 aa23.77■■□□□ 1.4
TOP3A-204ENST00000472959 KCNV1Q6PIU1 500 aa23.77■■□□□ 1.4
TOP3A-204ENST00000472959 PHF20Q9BVI0 1012 aa23.77■■□□□ 1.4
TOP3A-204ENST00000472959 SPC25Q9HBM1 224 aa23.77■■□□□ 1.4
TOP3A-204ENST00000472959 TMEM260Q9NX78 707 aa23.77■■□□□ 1.4
TOP3A-204ENST00000472959 GNEQ9Y223 722 aaKnown RBP23.77■■□□□ 1.4
TOP3A-204ENST00000472959 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.76■■□□□ 1.39
TOP3A-204ENST00000472959 ADCY6O43306 1168 aa23.76■■□□□ 1.39
TOP3A-204ENST00000472959 SREBF1P36956 1147 aa23.76■■□□□ 1.39
TOP3A-204ENST00000472959 GNPTABQ3T906 1256 aa23.76■■□□□ 1.39
TOP3A-204ENST00000472959 BLIDQ8IZY5 108 aa23.76■■□□□ 1.39
TOP3A-204ENST00000472959 MCM3APO60318 1980 aa23.75■■□□□ 1.39
TOP3A-204ENST00000472959 TXNP10599 105 aaKnown RBP23.75■■□□□ 1.39
TOP3A-204ENST00000472959 TGFB3P10600 412 aa23.75■■□□□ 1.39
TOP3A-204ENST00000472959 NKX3-2P78367 333 aa23.75■■□□□ 1.39
TOP3A-204ENST00000472959 TRIM29Q14134 588 aa23.75■■□□□ 1.39
TOP3A-204ENST00000472959 CCDC62Q6P9F0 684 aa23.75■■□□□ 1.39
TOP3A-204ENST00000472959 RNF180Q86T96 592 aa23.75■■□□□ 1.39
TOP3A-204ENST00000472959 LENG1Q96BZ8 264 aaPredicted RBP23.75■■□□□ 1.39
TOP3A-204ENST00000472959 INPP4AQ96PE3 977 aaPredicted RBP23.75■■□□□ 1.39
TOP3A-204ENST00000472959 AP5M1Q9H0R1 490 aa23.75■■□□□ 1.39
TOP3A-204ENST00000472959 UPF3AQ9H1J1 476 aaKnown RBP23.75■■□□□ 1.39
TOP3A-204ENST00000472959 KCNJ14Q9UNX9 436 aa23.75■■□□□ 1.39
TOP3A-204ENST00000472959 DNM1LO00429 736 aa23.74■■□□□ 1.39
TOP3A-204ENST00000472959 ADAMTS3O15072 1205 aa23.74■■□□□ 1.39
TOP3A-204ENST00000472959 RGS20O76081 388 aa23.74■■□□□ 1.39
TOP3A-204ENST00000472959 FARP2O94887 1054 aaPredicted RBP23.74■■□□□ 1.39
TOP3A-204ENST00000472959 PGK1P00558 417 aa23.74■■□□□ 1.39
TOP3A-204ENST00000472959 GJA9P57773 515 aa23.74■■□□□ 1.39
TOP3A-204ENST00000472959 NPY5RQ15761 445 aa23.74■■□□□ 1.39
TOP3A-204ENST00000472959 NLRX1Q86UT6 975 aa23.74■■□□□ 1.39
TOP3A-204ENST00000472959 FAM184AQ8NB25 1140 aa23.74■■□□□ 1.39
TOP3A-204ENST00000472959 SNX21Q969T3 373 aa23.74■■□□□ 1.39
TOP3A-204ENST00000472959 PGBD1Q96JS3 809 aa23.74■■□□□ 1.39
TOP3A-204ENST00000472959 KIF3AQ9Y496 699 aa23.74■■□□□ 1.39
TOP3A-204ENST00000472959 MRVI1Q9Y6F6 885 aa23.74■■□□□ 1.39
TOP3A-204ENST00000472959 SYNRGQ9UMZ2 1314 aa23.74■■□□□ 1.39
TOP3A-204ENST00000472959 ADAMTS4O75173 837 aa23.73■■□□□ 1.39
TOP3A-204ENST00000472959 ICAM3P32942 547 aa23.73■■□□□ 1.39
TOP3A-204ENST00000472959 RGS19P49795 217 aa23.73■■□□□ 1.39
TOP3A-204ENST00000472959 ARHGAP4P98171 946 aa23.73■■□□□ 1.39
TOP3A-204ENST00000472959 LRRC41Q15345 812 aa23.73■■□□□ 1.39
TOP3A-204ENST00000472959 TLK2Q86UE8 772 aa23.73■■□□□ 1.39
TOP3A-204ENST00000472959 RASGRP4Q8TDF6 673 aa23.73■■□□□ 1.39
TOP3A-204ENST00000472959 BRMS1Q9HCU9 246 aa23.73■■□□□ 1.39
TOP3A-204ENST00000472959 GJB4Q9NTQ9 266 aa23.73■■□□□ 1.39
TOP3A-204ENST00000472959 RTEL1Q9NZ71 1219 aa23.73■■□□□ 1.39
TOP3A-204ENST00000472959 DDX41Q9UJV9 622 aaKnown RBP23.73■■□□□ 1.39
TOP3A-204ENST00000472959 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.73■■□□□ 1.39
TOP3A-204ENST00000472959 SPATA31C2B4DYI2 1134 aa23.72■■□□□ 1.39
TOP3A-204ENST00000472959 KBTBD13C9JR72 458 aa23.72■■□□□ 1.39
TOP3A-204ENST00000472959 M0R2N6 131 aa23.72■■□□□ 1.39
TOP3A-204ENST00000472959 MAFGO15525 162 aa23.72■■□□□ 1.39
TOP3A-204ENST00000472959 DYNC1LI2O43237 492 aaPredicted RBP23.72■■□□□ 1.39
TOP3A-204ENST00000472959 FIBPO43427 364 aa23.72■■□□□ 1.39
TOP3A-204ENST00000472959 CYP3A4P08684 503 aa23.72■■□□□ 1.39
TOP3A-204ENST00000472959 CST5P28325 142 aaPredicted RBP23.72■■□□□ 1.39
TOP3A-204ENST00000472959 MNX1P50219 401 aaPredicted RBP23.72■■□□□ 1.39
TOP3A-204ENST00000472959 UBE2Q1Q7Z7E8 422 aa23.72■■□□□ 1.39
TOP3A-204ENST00000472959 KLHDC9Q8NEP7 349 aa23.72■■□□□ 1.39
TOP3A-204ENST00000472959 CRYGNQ8WXF5 182 aa23.72■■□□□ 1.39
TOP3A-204ENST00000472959 GPRASP2Q96D09 838 aa23.72■■□□□ 1.39
TOP3A-204ENST00000472959 ZFP91Q96JP5 570 aaPredicted RBP23.72■■□□□ 1.39
TOP3A-204ENST00000472959 CDHR1Q96JP9 859 aa23.72■■□□□ 1.39
TOP3A-204ENST00000472959 TSEN34Q9BSV6 310 aaKnown RBP23.72■■□□□ 1.39
TOP3A-204ENST00000472959 UBIAD1Q9Y5Z9 338 aa23.72■■□□□ 1.39
TOP3A-204ENST00000472959 LRRC37A2A6NM11 1700 aa23.72■■□□□ 1.39
TOP3A-204ENST00000472959 ARIH2O95376 493 aa23.71■■□□□ 1.39
TOP3A-204ENST00000472959 C6orf222P0C671 652 aaPredicted RBP23.71■■□□□ 1.39
TOP3A-204ENST00000472959 CUL4AQ13619 759 aa23.71■■□□□ 1.39
TOP3A-204ENST00000472959 TMEM63BQ5T3F8 832 aa23.71■■□□□ 1.39
TOP3A-204ENST00000472959 GJC2Q5T442 439 aaPredicted RBP23.71■■□□□ 1.39
TOP3A-204ENST00000472959 KRT25Q7Z3Z0 450 aa23.71■■□□□ 1.39
TOP3A-204ENST00000472959 NECAB2Q7Z6G3 386 aa23.71■■□□□ 1.39
TOP3A-204ENST00000472959 C8orf76Q96K31 380 aa23.71■■□□□ 1.39
TOP3A-204ENST00000472959 GH1P01241 217 aa23.7■■□□□ 1.38
TOP3A-204ENST00000472959 MMP1P03956 469 aa23.7■■□□□ 1.38
TOP3A-204ENST00000472959 MYCNP04198 464 aaPredicted RBP23.7■■□□□ 1.38
TOP3A-204ENST00000472959 ITGB5P18084 799 aa23.7■■□□□ 1.38
TOP3A-204ENST00000472959 KRT2P35908 639 aa23.7■■□□□ 1.38
TOP3A-204ENST00000472959 LY6KQ17RY6 165 aa23.7■■□□□ 1.38
TOP3A-204ENST00000472959 CEP55Q53EZ4 464 aa23.7■■□□□ 1.38
TOP3A-204ENST00000472959 GNASQ5JWF2 1037 aa23.7■■□□□ 1.38
TOP3A-204ENST00000472959 KRT40Q6A162 431 aa23.7■■□□□ 1.38
TOP3A-204ENST00000472959 PCSK9Q8NBP7 692 aaKnown RBP23.7■■□□□ 1.38
TOP3A-204ENST00000472959 PAWRQ96IZ0 340 aaKnown RBP23.7■■□□□ 1.38
TOP3A-204ENST00000472959 MXRA8Q9BRK3 442 aa23.7■■□□□ 1.38
TOP3A-204ENST00000472959 JADE2Q9NQC1 790 aa23.7■■□□□ 1.38
TOP3A-204ENST00000472959 K7ELQ4 463 aaPredicted RBP23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms