RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 COL23A1Q86Y22 540 aaPredicted RBP8.58□□□□□ -1.04
CCDC171-205ENST00000472806 HOMER1Q86YM7 354 aa8.58□□□□□ -1.04
CCDC171-205ENST00000472806 CNGA4Q8IV77 575 aa8.58□□□□□ -1.04
CCDC171-205ENST00000472806 TEX2Q8IWB9 1127 aa8.58□□□□□ -1.04
CCDC171-205ENST00000472806 FAM114A1Q8IWE2 563 aa8.58□□□□□ -1.04
CCDC171-205ENST00000472806 ZNF592Q92610 1267 aa8.58□□□□□ -1.04
CCDC171-205ENST00000472806 DPF2Q92785 391 aa8.58□□□□□ -1.04
CCDC171-205ENST00000472806 PPP1R13BQ96KQ4 1090 aa8.58□□□□□ -1.04
CCDC171-205ENST00000472806 ZDHHC15Q96MV8 337 aa8.58□□□□□ -1.04
CCDC171-205ENST00000472806 PANX2Q96RD6 677 aa8.58□□□□□ -1.04
CCDC171-205ENST00000472806 BAG1Q99933 345 aaPredicted RBP8.58□□□□□ -1.04
CCDC171-205ENST00000472806 TMX1Q9H3N1 280 aa8.58□□□□□ -1.04
CCDC171-205ENST00000472806 MAGEC2Q9UBF1 373 aaPredicted RBP8.58□□□□□ -1.04
CCDC171-205ENST00000472806 MTMR7Q9Y216 660 aa8.58□□□□□ -1.04
CCDC171-205ENST00000472806 RGPD3A6NKT7 1758 aaPredicted RBP8.58□□□□□ -1.04
CCDC171-205ENST00000472806 RGPD4Q7Z3J3 1758 aa8.58□□□□□ -1.04
CCDC171-205ENST00000472806 ANKRD31Q8N7Z5 1873 aa8.57□□□□□ -1.04
CCDC171-205ENST00000472806 PHLPP2Q6ZVD8 1323 aa8.57□□□□□ -1.04
CCDC171-205ENST00000472806 CAPN5O15484 640 aaPredicted RBP8.57□□□□□ -1.04
CCDC171-205ENST00000472806 CCNT1O60563 726 aaKnown RBP8.57□□□□□ -1.04
CCDC171-205ENST00000472806 GOLGA8HP0CJ92 632 aa8.57□□□□□ -1.04
CCDC171-205ENST00000472806 CRKP46108 304 aa8.57□□□□□ -1.04
CCDC171-205ENST00000472806 ZNF543Q08ER8 600 aa8.57□□□□□ -1.04
CCDC171-205ENST00000472806 ZNF827Q17R98 1081 aa8.57□□□□□ -1.04
CCDC171-205ENST00000472806 LETM2Q2VYF4 491 aa8.57□□□□□ -1.04
CCDC171-205ENST00000472806 KLHL10Q6JEL2 608 aa8.57□□□□□ -1.04
CCDC171-205ENST00000472806 C2CD5Q86YS7 1000 aa8.57□□□□□ -1.04
CCDC171-205ENST00000472806 TRMT44Q8IYL2 757 aaKnown RBP8.57□□□□□ -1.04
CCDC171-205ENST00000472806 PDCL2Q8N4E4 241 aa8.57□□□□□ -1.04
CCDC171-205ENST00000472806 PRR7Q8TB68 274 aa8.57□□□□□ -1.04
CCDC171-205ENST00000472806 DCAF4Q8WV16 495 aa8.57□□□□□ -1.04
CCDC171-205ENST00000472806 NELFBQ8WX92 580 aa8.57□□□□□ -1.04
CCDC171-205ENST00000472806 CUL5Q93034 780 aa8.57□□□□□ -1.04
CCDC171-205ENST00000472806 ZNF622Q969S3 477 aaKnown RBP eCLIP8.57□□□□□ -1.04
CCDC171-205ENST00000472806 IQCDQ96DY2 449 aa8.57□□□□□ -1.04
CCDC171-205ENST00000472806 DHTKD1Q96HY7 919 aaPredicted RBP8.57□□□□□ -1.04
CCDC171-205ENST00000472806 CDK5RAP3Q96JB5 506 aa8.57□□□□□ -1.04
CCDC171-205ENST00000472806 PIGSQ96S52 555 aa8.57□□□□□ -1.04
CCDC171-205ENST00000472806 SRRTQ9BXP5 876 aaKnown RBP8.57□□□□□ -1.04
CCDC171-205ENST00000472806 EVA1BQ9NVM1 165 aa8.57□□□□□ -1.04
CCDC171-205ENST00000472806 STK17AQ9UEE5 414 aa8.57□□□□□ -1.04
CCDC171-205ENST00000472806 LIMA1Q9UHB6 759 aaKnown RBP8.57□□□□□ -1.04
CCDC171-205ENST00000472806 SERPINA10Q9UK55 444 aa8.57□□□□□ -1.04
CCDC171-205ENST00000472806 SYNPO2Q9UMS6 1093 aa8.57□□□□□ -1.04
CCDC171-205ENST00000472806 CTNND2Q9UQB3 1225 aa8.57□□□□□ -1.04
CCDC171-205ENST00000472806 USP17L5A8MUK1 530 aa8.56□□□□□ -1.04
CCDC171-205ENST00000472806 F8W031 263 aaPredicted RBP8.56□□□□□ -1.04
CCDC171-205ENST00000472806 MPHOSPH10O00566 681 aaKnown RBP8.56□□□□□ -1.04
CCDC171-205ENST00000472806 RHOBTB3O94955 611 aa8.56□□□□□ -1.04
CCDC171-205ENST00000472806 SLU7O95391 586 aaKnown RBP8.56□□□□□ -1.04
CCDC171-205ENST00000472806 FGFR1OPO95684 399 aaKnown RBP8.56□□□□□ -1.04
CCDC171-205ENST00000472806 AKR1B1P15121 316 aa8.56□□□□□ -1.04
CCDC171-205ENST00000472806 EEF1GP26641 437 aaKnown RBP8.56□□□□□ -1.04
CCDC171-205ENST00000472806 PDIA5Q14554 519 aa8.56□□□□□ -1.04
CCDC171-205ENST00000472806 KARSQ15046 597 aaKnown RBP8.56□□□□□ -1.04
CCDC171-205ENST00000472806 IL17AQ16552 155 aa8.56□□□□□ -1.04
CCDC171-205ENST00000472806 CALCRLQ16602 461 aa8.56□□□□□ -1.04
CCDC171-205ENST00000472806 CCDC96Q2M329 555 aa8.56□□□□□ -1.04
CCDC171-205ENST00000472806 NOM1Q5C9Z4 860 aaKnown RBP8.56□□□□□ -1.04
CCDC171-205ENST00000472806 E4F1Q66K89 784 aaPredicted RBP8.56□□□□□ -1.04
CCDC171-205ENST00000472806 CDC42EP5Q6NZY7 148 aa8.56□□□□□ -1.04
CCDC171-205ENST00000472806 CNNM4Q6P4Q7 775 aa8.56□□□□□ -1.04
CCDC171-205ENST00000472806 RASGRP4Q8TDF6 673 aa8.56□□□□□ -1.04
CCDC171-205ENST00000472806 TBCKQ8TEA7 893 aa8.56□□□□□ -1.04
CCDC171-205ENST00000472806 ERO1AQ96HE7 468 aa8.56□□□□□ -1.04
CCDC171-205ENST00000472806 C7orf25Q9BPX7 421 aa8.56□□□□□ -1.04
CCDC171-205ENST00000472806 IDI2Q9BXS1 227 aa8.56□□□□□ -1.04
CCDC171-205ENST00000472806 THAP9Q9H5L6 903 aa8.56□□□□□ -1.04
CCDC171-205ENST00000472806 KANSL2Q9H9L4 492 aa8.56□□□□□ -1.04
CCDC171-205ENST00000472806 VAT1LQ9HCJ6 419 aa8.56□□□□□ -1.04
CCDC171-205ENST00000472806 RIC8AQ9NPQ8 531 aa8.56□□□□□ -1.04
CCDC171-205ENST00000472806 SAMSN1Q9NSI8 373 aaKnown RBP8.56□□□□□ -1.04
CCDC171-205ENST00000472806 EXOC1Q9NV70 894 aa8.56□□□□□ -1.04
CCDC171-205ENST00000472806 KBTBD4Q9NVX7 518 aa8.56□□□□□ -1.04
CCDC171-205ENST00000472806 TRMT1Q9NXH9 659 aaKnown RBP8.56□□□□□ -1.04
CCDC171-205ENST00000472806 NYAP2Q9P242 653 aa8.56□□□□□ -1.04
CCDC171-205ENST00000472806 CGNQ9P2M7 1197 aaKnown RBP8.56□□□□□ -1.04
CCDC171-205ENST00000472806 PI4KBQ9UBF8 816 aa8.56□□□□□ -1.04
CCDC171-205ENST00000472806 WASF2Q9Y6W5 498 aa8.56□□□□□ -1.04
CCDC171-205ENST00000472806 MYH8P13535 1937 aa8.56□□□□□ -1.04
CCDC171-205ENST00000472806 LRRC10BA6NIK2 292 aa8.55□□□□□ -1.04
CCDC171-205ENST00000472806 TMEM232C9JQI7 657 aa8.55□□□□□ -1.04
CCDC171-205ENST00000472806 N4BP3O15049 544 aa8.55□□□□□ -1.04
CCDC171-205ENST00000472806 ZBTB5O15062 677 aa8.55□□□□□ -1.04
CCDC171-205ENST00000472806 MARCH6O60337 910 aa8.55□□□□□ -1.04
CCDC171-205ENST00000472806 ENTPD3O75355 529 aa8.55□□□□□ -1.04
CCDC171-205ENST00000472806 CCDC175P0C221 793 aa8.55□□□□□ -1.04
CCDC171-205ENST00000472806 SHMT1P34896 483 aa8.55□□□□□ -1.04
CCDC171-205ENST00000472806 STX17P56962 302 aa8.55□□□□□ -1.04
CCDC171-205ENST00000472806 ETF1P62495 437 aaKnown RBP8.55□□□□□ -1.04
CCDC171-205ENST00000472806 RBM10P98175 930 aaKnown RBP8.55□□□□□ -1.04
CCDC171-205ENST00000472806 TTLL12Q14166 644 aaPredicted RBP8.55□□□□□ -1.04
CCDC171-205ENST00000472806 SEPT2Q15019 361 aa8.55□□□□□ -1.04
CCDC171-205ENST00000472806 SLC35G1Q2M3R5 365 aa8.55□□□□□ -1.04
CCDC171-205ENST00000472806 COBLL1Q53SF7 1204 aa8.55□□□□□ -1.04
CCDC171-205ENST00000472806 KRT79Q5XKE5 535 aa8.55□□□□□ -1.04
CCDC171-205ENST00000472806 PPP4R3AQ6IN85 833 aa8.55□□□□□ -1.04
CCDC171-205ENST00000472806 APOBEC3HQ6NTF7 200 aaKnown RBP8.55□□□□□ -1.04
CCDC171-205ENST00000472806 SV2BQ7L1I2 683 aa8.55□□□□□ -1.04
CCDC171-205ENST00000472806 ADSSL1Q8N142 457 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms