RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 SEC23AQ15436 765 aa10.66□□□□□ -0.7
SMC4-213ENST00000472282 IFIT1BQ5T764 474 aaKnown RBP10.66□□□□□ -0.7
SMC4-213ENST00000472282 ARMCX2Q7L311 632 aa10.66□□□□□ -0.7
SMC4-213ENST00000472282 FAM160B2Q86V87 743 aa10.66□□□□□ -0.7
SMC4-213ENST00000472282 DGKHQ86XP1 1220 aa10.66□□□□□ -0.7
SMC4-213ENST00000472282 FAM133AQ8N9E0 248 aa10.66□□□□□ -0.7
SMC4-213ENST00000472282 CHURC1Q8WUH1 139 aa10.66□□□□□ -0.7
SMC4-213ENST00000472282 NLRP7Q8WX94 980 aa10.66□□□□□ -0.7
SMC4-213ENST00000472282 JAKMIP1Q96N16 626 aaKnown RBP10.66□□□□□ -0.7
SMC4-213ENST00000472282 TTC14Q96N46 770 aa10.66□□□□□ -0.7
SMC4-213ENST00000472282 PURBQ96QR8 312 aaKnown RBP10.66□□□□□ -0.7
SMC4-213ENST00000472282 LRRC2Q9BYS8 371 aa10.66□□□□□ -0.7
SMC4-213ENST00000472282 ACAD9Q9H845 621 aa10.66□□□□□ -0.7
SMC4-213ENST00000472282 CNPY2Q9Y2B0 182 aa10.66□□□□□ -0.7
SMC4-213ENST00000472282 RANBP2P49792 3224 aaKnown RBP10.65□□□□□ -0.7
SMC4-213ENST00000472282 KIAA1217Q5T5P2 1943 aa10.65□□□□□ -0.7
SMC4-213ENST00000472282 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.65□□□□□ -0.7
SMC4-213ENST00000472282 A0A1W2PQ45 241 aaPredicted RBP10.65□□□□□ -0.7
SMC4-213ENST00000472282 A0A1W2PQY0 241 aa10.65□□□□□ -0.7
SMC4-213ENST00000472282 ERICH2A1L162 156 aa10.65□□□□□ -0.7
SMC4-213ENST00000472282 TRIM43BA6NCK2 446 aa10.65□□□□□ -0.7
SMC4-213ENST00000472282 ZBTB24O43167 697 aaPredicted RBP10.65□□□□□ -0.7
SMC4-213ENST00000472282 PLA2G6O60733 806 aa10.65□□□□□ -0.7
SMC4-213ENST00000472282 ITGB8P26012 769 aa10.65□□□□□ -0.7
SMC4-213ENST00000472282 ACVR2BQ13705 512 aa10.65□□□□□ -0.7
SMC4-213ENST00000472282 WTAPQ15007 396 aa10.65□□□□□ -0.7
SMC4-213ENST00000472282 CCDC96Q2M329 555 aa10.65□□□□□ -0.7
SMC4-213ENST00000472282 TMEM67Q5HYA8 995 aa10.65□□□□□ -0.7
SMC4-213ENST00000472282 TMEM63BQ5T3F8 832 aa10.65□□□□□ -0.7
SMC4-213ENST00000472282 CCSAPQ6IQ19 270 aaPredicted RBP10.65□□□□□ -0.7
SMC4-213ENST00000472282 TREML4Q6UXN2 200 aa10.65□□□□□ -0.7
SMC4-213ENST00000472282 Q7L0L9 218 aa10.65□□□□□ -0.7
SMC4-213ENST00000472282 CCDC144CPQ8IYA2 1237 aa10.65□□□□□ -0.7
SMC4-213ENST00000472282 MSL3Q8N5Y2 521 aaKnown RBP10.65□□□□□ -0.7
SMC4-213ENST00000472282 PNMA1Q8ND90 353 aa10.65□□□□□ -0.7
SMC4-213ENST00000472282 KLHDC9Q8NEP7 349 aa10.65□□□□□ -0.7
SMC4-213ENST00000472282 ANKS1AQ92625 1134 aa10.65□□□□□ -0.7
SMC4-213ENST00000472282 TRIM43Q96BQ3 446 aaPredicted RBP10.65□□□□□ -0.7
SMC4-213ENST00000472282 TCEANC2Q96MN5 208 aa10.65□□□□□ -0.7
SMC4-213ENST00000472282 TRERF1Q96PN7 1200 aa10.65□□□□□ -0.7
SMC4-213ENST00000472282 KAT14Q9H8E8 782 aa10.65□□□□□ -0.7
SMC4-213ENST00000472282 SENP2Q9HC62 589 aa10.65□□□□□ -0.7
SMC4-213ENST00000472282 GPCPD1Q9NPB8 672 aa10.65□□□□□ -0.7
SMC4-213ENST00000472282 PRDM5Q9NQX1 630 aaPredicted RBP10.65□□□□□ -0.7
SMC4-213ENST00000472282 PDLIM7Q9NR12 457 aa10.65□□□□□ -0.7
SMC4-213ENST00000472282 FBXO40Q9UH90 709 aa10.65□□□□□ -0.7
SMC4-213ENST00000472282 GBF1Q92538 1859 aa10.65□□□□□ -0.7
SMC4-213ENST00000472282 SH2B2O14492 632 aaPredicted RBP10.64□□□□□ -0.71
SMC4-213ENST00000472282 CTAGE5O15320 804 aa10.64□□□□□ -0.71
SMC4-213ENST00000472282 FDX1P10109 184 aa10.64□□□□□ -0.71
SMC4-213ENST00000472282 PDHBP11177 359 aa10.64□□□□□ -0.71
SMC4-213ENST00000472282 CPA1P15085 419 aa10.64□□□□□ -0.71
SMC4-213ENST00000472282 CASTP20810 708 aaKnown RBP10.64□□□□□ -0.71
SMC4-213ENST00000472282 TLE2Q04725 743 aa10.64□□□□□ -0.71
SMC4-213ENST00000472282 CCDC144BQ3MJ40 725 aa10.64□□□□□ -0.71
SMC4-213ENST00000472282 LRIT3Q3SXY7 679 aa10.64□□□□□ -0.71
SMC4-213ENST00000472282 C1orf53Q5VUE5 145 aa10.64□□□□□ -0.71
SMC4-213ENST00000472282 BLOC1S2Q6QNY1 142 aa10.64□□□□□ -0.71
SMC4-213ENST00000472282 BTNL9Q6UXG8 535 aa10.64□□□□□ -0.71
SMC4-213ENST00000472282 RNF180Q86T96 592 aa10.64□□□□□ -0.71
SMC4-213ENST00000472282 IGDCC4Q8TDY8 1250 aa10.64□□□□□ -0.71
SMC4-213ENST00000472282 DCAF4Q8WV16 495 aa10.64□□□□□ -0.71
SMC4-213ENST00000472282 BADQ92934 168 aa10.64□□□□□ -0.71
SMC4-213ENST00000472282 TMEM87BQ96K49 555 aa10.64□□□□□ -0.71
SMC4-213ENST00000472282 RANBP17Q9H2T7 1088 aaKnown RBP10.64□□□□□ -0.71
SMC4-213ENST00000472282 CPVLQ9H3G5 476 aa10.64□□□□□ -0.71
SMC4-213ENST00000472282 LY9Q9HBG7 655 aa10.64□□□□□ -0.71
SMC4-213ENST00000472282 FAM184BQ9ULE4 1060 aa10.64□□□□□ -0.71
SMC4-213ENST00000472282 WDR19Q8NEZ3 1342 aa10.63□□□□□ -0.71
SMC4-213ENST00000472282 MYH7BA7E2Y1 1941 aa10.63□□□□□ -0.71
SMC4-213ENST00000472282 NFIBO00712 420 aa10.63□□□□□ -0.71
SMC4-213ENST00000472282 DUSP11O75319 330 aaKnown RBP10.63□□□□□ -0.71
SMC4-213ENST00000472282 ICAM1P05362 532 aa10.63□□□□□ -0.71
SMC4-213ENST00000472282 HMGB1P09429 215 aaKnown RBP10.63□□□□□ -0.71
SMC4-213ENST00000472282 PSMA5P28066 241 aa10.63□□□□□ -0.71
SMC4-213ENST00000472282 ACLYP53396 1101 aa10.63□□□□□ -0.71
SMC4-213ENST00000472282 EXOSC10Q01780 885 aaKnown RBP10.63□□□□□ -0.71
SMC4-213ENST00000472282 KCNA10Q16322 511 aa10.63□□□□□ -0.71
SMC4-213ENST00000472282 MSS51Q4VC12 460 aa10.63□□□□□ -0.71
SMC4-213ENST00000472282 C9orf50Q5SZB4 431 aa10.63□□□□□ -0.71
SMC4-213ENST00000472282 SYDE2Q5VT97 1194 aa10.63□□□□□ -0.71
SMC4-213ENST00000472282 BRICD5Q6PL45 260 aa10.63□□□□□ -0.71
SMC4-213ENST00000472282 DHX32Q7L7V1 743 aaKnown RBP10.63□□□□□ -0.71
SMC4-213ENST00000472282 LBHD1Q9BQE6 289 aaPredicted RBP10.63□□□□□ -0.71
SMC4-213ENST00000472282 MTA3Q9BTC8 594 aa10.63□□□□□ -0.71
SMC4-213ENST00000472282 ABHD16BQ9H3Z7 469 aa10.63□□□□□ -0.71
SMC4-213ENST00000472282 PDGFCQ9NRA1 345 aa10.63□□□□□ -0.71
SMC4-213ENST00000472282 CYP39A1Q9NYL5 469 aa10.63□□□□□ -0.71
SMC4-213ENST00000472282 PKD2L1Q9P0L9 805 aa10.63□□□□□ -0.71
SMC4-213ENST00000472282 CCPG1Q9ULG6 757 aa10.63□□□□□ -0.71
SMC4-213ENST00000472282 DNAH12Q6ZR08 3092 aa10.62□□□□□ -0.71
SMC4-213ENST00000472282 CCDC69A6NI79 296 aa10.62□□□□□ -0.71
SMC4-213ENST00000472282 C6orf222P0C671 652 aaPredicted RBP10.62□□□□□ -0.71
SMC4-213ENST00000472282 GOLGA8HP0CJ92 632 aa10.62□□□□□ -0.71
SMC4-213ENST00000472282 SNHG28P0DPA3 235 aa10.62□□□□□ -0.71
SMC4-213ENST00000472282 RPS6KB1P23443 525 aa10.62□□□□□ -0.71
SMC4-213ENST00000472282 EPHB4P54760 987 aa10.62□□□□□ -0.71
SMC4-213ENST00000472282 ANAPC15P60006 121 aa10.62□□□□□ -0.71
SMC4-213ENST00000472282 BEX3Q00994 111 aa10.62□□□□□ -0.71
SMC4-213ENST00000472282 ZNF543Q08ER8 600 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms