RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 C7orf31Q8N865 590 aa12.22□□□□□ -0.45
CDHR3-209ENST00000472116 KCNG4Q8TDN1 519 aa12.22□□□□□ -0.45
CDHR3-209ENST00000472116 MORC4Q8TE76 937 aa12.22□□□□□ -0.45
CDHR3-209ENST00000472116 SCFD2Q8WU76 684 aa12.22□□□□□ -0.45
CDHR3-209ENST00000472116 CHURC1Q8WUH1 139 aa12.22□□□□□ -0.45
CDHR3-209ENST00000472116 RMDN1Q96DB5 314 aa12.22□□□□□ -0.45
CDHR3-209ENST00000472116 PHF7Q9BWX1 381 aaPredicted RBP12.22□□□□□ -0.45
CDHR3-209ENST00000472116 MKNK2Q9HBH9 465 aa12.22□□□□□ -0.45
CDHR3-209ENST00000472116 TLR7Q9NYK1 1049 aaKnown RBP12.22□□□□□ -0.45
CDHR3-209ENST00000472116 CYP39A1Q9NYL5 469 aa12.22□□□□□ -0.45
CDHR3-209ENST00000472116 CLIP2Q9UDT6 1046 aa12.22□□□□□ -0.45
CDHR3-209ENST00000472116 VPS13AQ96RL7 3174 aa12.21□□□□□ -0.45
CDHR3-209ENST00000472116 CYP2D7A0A087X1C5 515 aa12.21□□□□□ -0.45
CDHR3-209ENST00000472116 CSPG5O95196 566 aa12.21□□□□□ -0.45
CDHR3-209ENST00000472116 BMP3P12645 472 aa12.21□□□□□ -0.45
CDHR3-209ENST00000472116 ALDH5A1P51649 535 aaPredicted RBP12.21□□□□□ -0.45
CDHR3-209ENST00000472116 RRP1P56182 461 aaKnown RBP12.21□□□□□ -0.45
CDHR3-209ENST00000472116 PDE4DQ08499 809 aa12.21□□□□□ -0.45
CDHR3-209ENST00000472116 TCTN1Q2MV58 587 aa12.21□□□□□ -0.45
CDHR3-209ENST00000472116 FAM160B2Q86V87 743 aa12.21□□□□□ -0.45
CDHR3-209ENST00000472116 FARP1Q9Y4F1 1045 aaPredicted RBP12.21□□□□□ -0.45
CDHR3-209ENST00000472116 TMEM232C9JQI7 657 aa12.2□□□□□ -0.46
CDHR3-209ENST00000472116 LINC01565O15544 149 aa12.2□□□□□ -0.46
CDHR3-209ENST00000472116 MBD4O95243 580 aa12.2□□□□□ -0.46
CDHR3-209ENST00000472116 PTK7Q13308 1070 aa12.2□□□□□ -0.46
CDHR3-209ENST00000472116 ADAM15Q13444 863 aa12.2□□□□□ -0.46
CDHR3-209ENST00000472116 SMRP1Q8NCR6 262 aa12.2□□□□□ -0.46
CDHR3-209ENST00000472116 DBF4BQ8NFT6 615 aa12.2□□□□□ -0.46
CDHR3-209ENST00000472116 DHX38Q92620 1227 aaKnown RBP12.2□□□□□ -0.46
CDHR3-209ENST00000472116 IFIH1Q9BYX4 1025 aaKnown RBP12.2□□□□□ -0.46
CDHR3-209ENST00000472116 KIAA1217Q5T5P2 1943 aa12.19□□□□□ -0.46
CDHR3-209ENST00000472116 RBM47A0AV96 593 aaKnown RBP12.19□□□□□ -0.46
CDHR3-209ENST00000472116 B4DLN1 442 aa12.19□□□□□ -0.46
CDHR3-209ENST00000472116 C5orf67F2Z3F1 127 aa12.19□□□□□ -0.46
CDHR3-209ENST00000472116 GRM6O15303 877 aa12.19□□□□□ -0.46
CDHR3-209ENST00000472116 PRKAB2O43741 272 aa12.19□□□□□ -0.46
CDHR3-209ENST00000472116 TXNP10599 105 aaKnown RBP12.19□□□□□ -0.46
CDHR3-209ENST00000472116 CASTP20810 708 aaKnown RBP12.19□□□□□ -0.46
CDHR3-209ENST00000472116 GTF2F1P35269 517 aaKnown RBP eCLIP12.19□□□□□ -0.46
CDHR3-209ENST00000472116 MRPL12P52815 198 aaKnown RBP12.19□□□□□ -0.46
CDHR3-209ENST00000472116 COASYQ13057 564 aa12.19□□□□□ -0.46
CDHR3-209ENST00000472116 ZNF618Q5T7W0 954 aa12.19□□□□□ -0.46
CDHR3-209ENST00000472116 SLFN13Q68D06 897 aa12.19□□□□□ -0.46
CDHR3-209ENST00000472116 SEPT8Q92599 483 aa12.19□□□□□ -0.46
CDHR3-209ENST00000472116 TOP1MTQ969P6 601 aa12.19□□□□□ -0.46
CDHR3-209ENST00000472116 IL17RAQ96F46 866 aa12.19□□□□□ -0.46
CDHR3-209ENST00000472116 MSLNLQ96KJ4 702 aa12.19□□□□□ -0.46
CDHR3-209ENST00000472116 HINFPQ9BQA5 517 aa12.19□□□□□ -0.46
CDHR3-209ENST00000472116 KATNAL1Q9BW62 490 aa12.19□□□□□ -0.46
CDHR3-209ENST00000472116 MFSD1Q9H3U5 465 aa12.19□□□□□ -0.46
CDHR3-209ENST00000472116 ARPP21Q9UBL0 812 aaPredicted RBP12.19□□□□□ -0.46
CDHR3-209ENST00000472116 GTF2IRD1Q9UHL9 959 aa12.19□□□□□ -0.46
CDHR3-209ENST00000472116 CCPG1Q9ULG6 757 aa12.19□□□□□ -0.46
CDHR3-209ENST00000472116 SYNPO2Q9UMS6 1093 aa12.19□□□□□ -0.46
CDHR3-209ENST00000472116 USP15Q9Y4E8 981 aaPredicted RBP12.19□□□□□ -0.46
CDHR3-209ENST00000472116 MAP1BP46821 2468 aaKnown RBP12.18□□□□□ -0.46
CDHR3-209ENST00000472116 KAT6AQ92794 2004 aa12.18□□□□□ -0.46
CDHR3-209ENST00000472116 PTPDC1A2A3K4 754 aa12.18□□□□□ -0.46
CDHR3-209ENST00000472116 PDGFBP01127 241 aaPredicted RBP12.18□□□□□ -0.46
CDHR3-209ENST00000472116 MMP1P03956 469 aa12.18□□□□□ -0.46
CDHR3-209ENST00000472116 MUM1L1Q5H9M0 696 aa12.18□□□□□ -0.46
CDHR3-209ENST00000472116 DHX37Q8IY37 1157 aaKnown RBP12.18□□□□□ -0.46
CDHR3-209ENST00000472116 GMCL1P1Q8NEA9 526 aa12.18□□□□□ -0.46
CDHR3-209ENST00000472116 EAF2Q96CJ1 260 aaPredicted RBP12.18□□□□□ -0.46
CDHR3-209ENST00000472116 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.18□□□□□ -0.46
CDHR3-209ENST00000472116 ZNF287Q9HBT7 754 aa12.18□□□□□ -0.46
CDHR3-209ENST00000472116 CEP250Q9BV73 2442 aa12.18□□□□□ -0.46
CDHR3-209ENST00000472116 RSPH10B2B2RC85 870 aa12.17□□□□□ -0.46
CDHR3-209ENST00000472116 TTLL1O95922 423 aa12.17□□□□□ -0.46
CDHR3-209ENST00000472116 RSPH10BP0C881 870 aa12.17□□□□□ -0.46
CDHR3-209ENST00000472116 ATF7P17544 494 aaPredicted RBP12.17□□□□□ -0.46
CDHR3-209ENST00000472116 BMPR1AP36894 532 aa12.17□□□□□ -0.46
CDHR3-209ENST00000472116 MTMR3Q13615 1198 aa12.17□□□□□ -0.46
CDHR3-209ENST00000472116 ST3GAL2Q16842 350 aa12.17□□□□□ -0.46
CDHR3-209ENST00000472116 UBALD2Q8IYN6 164 aa12.17□□□□□ -0.46
CDHR3-209ENST00000472116 KIAA2013Q8IYS2 634 aa12.17□□□□□ -0.46
CDHR3-209ENST00000472116 ZNF444Q8N0Y2 327 aaPredicted RBP12.17□□□□□ -0.46
CDHR3-209ENST00000472116 STK11IPQ8N1F8 1099 aa12.17□□□□□ -0.46
CDHR3-209ENST00000472116 EFHBQ8N7U6 833 aa12.17□□□□□ -0.46
CDHR3-209ENST00000472116 TMEM105Q8N8V8 129 aa12.17□□□□□ -0.46
CDHR3-209ENST00000472116 STAG1Q8WVM7 1258 aa12.17□□□□□ -0.46
CDHR3-209ENST00000472116 COPS5Q92905 334 aa12.17□□□□□ -0.46
CDHR3-209ENST00000472116 PURBQ96QR8 312 aaKnown RBP12.17□□□□□ -0.46
CDHR3-209ENST00000472116 CTAGE1Q96RT6 745 aa12.17□□□□□ -0.46
CDHR3-209ENST00000472116 DNAJC2Q99543 621 aaKnown RBP12.17□□□□□ -0.46
CDHR3-209ENST00000472116 ALG1Q9BT22 464 aa12.17□□□□□ -0.46
CDHR3-209ENST00000472116 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.17□□□□□ -0.46
CDHR3-209ENST00000472116 HDAC6Q9UBN7 1215 aa12.17□□□□□ -0.46
CDHR3-209ENST00000472116 SLC4A4Q9Y6R1 1079 aa12.17□□□□□ -0.46
CDHR3-209ENST00000472116 ZNF292O60281 2723 aa12.17□□□□□ -0.46
CDHR3-209ENST00000472116 DMXL1Q9Y485 3027 aa12.16□□□□□ -0.46
CDHR3-209ENST00000472116 TCRBV5S4A2TA0A5A2 114 aa12.16□□□□□ -0.46
CDHR3-209ENST00000472116 GOLIM4O00461 696 aa12.16□□□□□ -0.46
CDHR3-209ENST00000472116 MMP3P08254 477 aa12.16□□□□□ -0.46
CDHR3-209ENST00000472116 RASA1P20936 1047 aa12.16□□□□□ -0.46
CDHR3-209ENST00000472116 THPOP40225 353 aa12.16□□□□□ -0.46
CDHR3-209ENST00000472116 SLC1A4P43007 532 aa12.16□□□□□ -0.46
CDHR3-209ENST00000472116 BAATQ14032 418 aaPredicted RBP12.16□□□□□ -0.46
CDHR3-209ENST00000472116 PLEKHG4Q58EX7 1191 aa12.16□□□□□ -0.46
CDHR3-209ENST00000472116 ASTLQ6HA08 431 aaPredicted RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms