RNA–Protein interactions for RNA: ENST00000471887.1

HDAC9-221, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-221ENST00000471887 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.74□□□□□ -1.17
HDAC9-221ENST00000471887 AP5M1Q9H0R1 490 aa7.74□□□□□ -1.17
HDAC9-221ENST00000471887 RXFP1Q9HBX9 757 aa7.74□□□□□ -1.17
HDAC9-221ENST00000471887 HCFC2Q9Y5Z7 792 aa7.74□□□□□ -1.17
HDAC9-221ENST00000471887 BTBD11A6QL63 1104 aa7.73□□□□□ -1.17
HDAC9-221ENST00000471887 AQP7O14520 342 aa7.73□□□□□ -1.17
HDAC9-221ENST00000471887 ZBTB7AO95365 584 aa7.73□□□□□ -1.17
HDAC9-221ENST00000471887 TSPAN15O95858 294 aa7.73□□□□□ -1.17
HDAC9-221ENST00000471887 C8AP07357 584 aa7.73□□□□□ -1.17
HDAC9-221ENST00000471887 MED14OSP0DP75 135 aa7.73□□□□□ -1.17
HDAC9-221ENST00000471887 DLG4P78352 724 aa7.73□□□□□ -1.17
HDAC9-221ENST00000471887 SLC9A5Q14940 896 aa7.73□□□□□ -1.17
HDAC9-221ENST00000471887 SH3TC2Q8TF17 1288 aa7.73□□□□□ -1.17
HDAC9-221ENST00000471887 TSPAN17Q96FV3 270 aa7.73□□□□□ -1.17
HDAC9-221ENST00000471887 SGPP1Q9BX95 441 aa7.73□□□□□ -1.17
HDAC9-221ENST00000471887 CNTD2Q9H8S5 307 aa7.73□□□□□ -1.17
HDAC9-221ENST00000471887 TRAF6Q9Y4K3 522 aa7.73□□□□□ -1.17
HDAC9-221ENST00000471887 TCAF2A6NFQ2 919 aa7.72□□□□□ -1.17
HDAC9-221ENST00000471887 C6orf222P0C671 652 aaPredicted RBP7.72□□□□□ -1.17
HDAC9-221ENST00000471887 SLC6A11P48066 632 aa7.72□□□□□ -1.17
HDAC9-221ENST00000471887 ZNF200P98182 395 aaPredicted RBP7.72□□□□□ -1.17
HDAC9-221ENST00000471887 SEC14L1Q92503 715 aa7.72□□□□□ -1.17
HDAC9-221ENST00000471887 EPB41L1Q9H4G0 881 aa7.72□□□□□ -1.17
HDAC9-221ENST00000471887 GCM1Q9NP62 436 aa7.72□□□□□ -1.17
HDAC9-221ENST00000471887 ASXL2Q76L83 1435 aa7.71□□□□□ -1.17
HDAC9-221ENST00000471887 N4BP3O15049 544 aa7.71□□□□□ -1.18
HDAC9-221ENST00000471887 DGKIO75912 1065 aa7.71□□□□□ -1.18
HDAC9-221ENST00000471887 KRT1P04264 644 aa7.71□□□□□ -1.18
HDAC9-221ENST00000471887 C1QTNF9P0C862 333 aa7.71□□□□□ -1.18
HDAC9-221ENST00000471887 NAT1P18440 290 aa7.71□□□□□ -1.18
HDAC9-221ENST00000471887 GRK2P25098 689 aa7.71□□□□□ -1.18
HDAC9-221ENST00000471887 GRK3P35626 688 aa7.71□□□□□ -1.18
HDAC9-221ENST00000471887 RAP1GAPP47736 663 aa7.71□□□□□ -1.18
HDAC9-221ENST00000471887 CHRNA2Q15822 529 aa7.71□□□□□ -1.18
HDAC9-221ENST00000471887 ATG14Q6ZNE5 492 aa7.71□□□□□ -1.18
HDAC9-221ENST00000471887 LDHDQ86WU2 507 aa7.71□□□□□ -1.18
HDAC9-221ENST00000471887 MZB1Q8WU39 189 aa7.71□□□□□ -1.18
HDAC9-221ENST00000471887 ALG1Q9BT22 464 aa7.71□□□□□ -1.18
HDAC9-221ENST00000471887 CDIP1Q9H305 208 aa7.71□□□□□ -1.18
HDAC9-221ENST00000471887 SIT1Q9Y3P8 196 aa7.71□□□□□ -1.18
HDAC9-221ENST00000471887 CDR1P51861 262 aa7.7□□□□□ -1.18
HDAC9-221ENST00000471887 ZNF124Q15973 351 aa7.7□□□□□ -1.18
HDAC9-221ENST00000471887 MTDHQ86UE4 582 aaKnown RBP7.7□□□□□ -1.18
HDAC9-221ENST00000471887 ALG3Q92685 438 aa7.7□□□□□ -1.18
HDAC9-221ENST00000471887 PPARGC1AQ9UBK2 798 aaKnown RBP7.7□□□□□ -1.18
HDAC9-221ENST00000471887 SGSM2O43147 1006 aa7.69□□□□□ -1.18
HDAC9-221ENST00000471887 EFCAB14O75071 495 aa7.69□□□□□ -1.18
HDAC9-221ENST00000471887 SOD2P04179 222 aa7.69□□□□□ -1.18
HDAC9-221ENST00000471887 APPP05067 770 aa7.69□□□□□ -1.18
HDAC9-221ENST00000471887 EPHB3P54753 998 aa7.69□□□□□ -1.18
HDAC9-221ENST00000471887 TARBP2Q15633 366 aaKnown RBP7.69□□□□□ -1.18
HDAC9-221ENST00000471887 JAM3Q9BX67 310 aa7.69□□□□□ -1.18
HDAC9-221ENST00000471887 NDOR1Q9UHB4 597 aa7.69□□□□□ -1.18
HDAC9-221ENST00000471887 SFMBT1Q9UHJ3 866 aa7.69□□□□□ -1.18
HDAC9-221ENST00000471887 PCDHA5Q9Y5H7 936 aa7.69□□□□□ -1.18
HDAC9-221ENST00000471887 IRS2Q9Y4H2 1338 aa7.69□□□□□ -1.18
HDAC9-221ENST00000471887 FAM47E-STBD1D6RA91 191 aa7.68□□□□□ -1.18
HDAC9-221ENST00000471887 KRIT1O00522 736 aa7.68□□□□□ -1.18
HDAC9-221ENST00000471887 HGSO14964 777 aaPredicted RBP7.68□□□□□ -1.18
HDAC9-221ENST00000471887 MAFKO60675 156 aa7.68□□□□□ -1.18
HDAC9-221ENST00000471887 NCAM1P13591 858 aa7.68□□□□□ -1.18
HDAC9-221ENST00000471887 PFKLP17858 780 aa7.68□□□□□ -1.18
HDAC9-221ENST00000471887 SQSTM1Q13501 440 aa7.68□□□□□ -1.18
HDAC9-221ENST00000471887 STEAP3Q658P3 488 aa7.68□□□□□ -1.18
HDAC9-221ENST00000471887 MILR1Q7Z6M3 343 aa7.68□□□□□ -1.18
HDAC9-221ENST00000471887 NOP9Q86U38 636 aaKnown RBP7.68□□□□□ -1.18
HDAC9-221ENST00000471887 ANKLE2Q86XL3 938 aa7.68□□□□□ -1.18
HDAC9-221ENST00000471887 MRPL4Q9BYD3 311 aaKnown RBP7.68□□□□□ -1.18
HDAC9-221ENST00000471887 RNF38Q9H0F5 515 aa7.68□□□□□ -1.18
HDAC9-221ENST00000471887 KANSL2Q9H9L4 492 aa7.68□□□□□ -1.18
HDAC9-221ENST00000471887 CD320Q9NPF0 282 aa7.68□□□□□ -1.18
HDAC9-221ENST00000471887 TMEM260Q9NX78 707 aa7.68□□□□□ -1.18
HDAC9-221ENST00000471887 PALD1Q9ULE6 856 aa7.68□□□□□ -1.18
HDAC9-221ENST00000471887 SMG5Q9UPR3 1016 aaKnown RBP7.68□□□□□ -1.18
HDAC9-221ENST00000471887 ZNF652Q9Y2D9 606 aa7.68□□□□□ -1.18
HDAC9-221ENST00000471887 BUB1BO60566 1050 aaPredicted RBP7.67□□□□□ -1.18
HDAC9-221ENST00000471887 FBLN1P23142 703 aa7.67□□□□□ -1.18
HDAC9-221ENST00000471887 NCKAP1LP55160 1127 aa7.67□□□□□ -1.18
HDAC9-221ENST00000471887 GUCY1A3Q02108 690 aa7.67□□□□□ -1.18
HDAC9-221ENST00000471887 PAK1Q13153 545 aa7.67□□□□□ -1.18
HDAC9-221ENST00000471887 TRIM61Q5EBN2 209 aa7.67□□□□□ -1.18
HDAC9-221ENST00000471887 EMC4Q5J8M3 183 aa7.67□□□□□ -1.18
HDAC9-221ENST00000471887 IGDCC3Q8IVU1 814 aa7.67□□□□□ -1.18
HDAC9-221ENST00000471887 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.67□□□□□ -1.18
HDAC9-221ENST00000471887 SIGLEC10Q96LC7 697 aa7.67□□□□□ -1.18
HDAC9-221ENST00000471887 RNPC3Q96LT9 517 aaKnown RBP7.67□□□□□ -1.18
HDAC9-221ENST00000471887 BCAS3Q9H6U6 928 aa7.67□□□□□ -1.18
HDAC9-221ENST00000471887 SLC52A2Q9HAB3 445 aa7.67□□□□□ -1.18
HDAC9-221ENST00000471887 GOLGA2P5Q9HBQ8 144 aa7.67□□□□□ -1.18
HDAC9-221ENST00000471887 NCOA5Q9HCD5 579 aaKnown RBP7.67□□□□□ -1.18
HDAC9-221ENST00000471887 PCDHA8Q9Y5H6 950 aa7.67□□□□□ -1.18
HDAC9-221ENST00000471887 IRAK3Q9Y616 596 aa7.67□□□□□ -1.18
HDAC9-221ENST00000471887 ASGR2P07307 311 aa7.66□□□□□ -1.18
HDAC9-221ENST00000471887 GNAT1P11488 350 aa7.66□□□□□ -1.18
HDAC9-221ENST00000471887 PMLP29590 882 aa7.66□□□□□ -1.18
HDAC9-221ENST00000471887 SPIRE1Q08AE8 756 aa7.66□□□□□ -1.18
HDAC9-221ENST00000471887 KCNA10Q16322 511 aa7.66□□□□□ -1.18
HDAC9-221ENST00000471887 AMIGO3Q86WK7 504 aa7.66□□□□□ -1.18
HDAC9-221ENST00000471887 GSTCDQ8NEC7 633 aa7.66□□□□□ -1.18
HDAC9-221ENST00000471887 KCNJ15Q99712 375 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms