RNA–Protein interactions for RNA: ENST00000471297.1

SMNDC1-204, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 823 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-204ENST00000471297 PDGFAP04085 211 aa7.06□□□□□ -1.28
SMNDC1-204ENST00000471297 RPLP1P05386 114 aaKnown RBP7.06□□□□□ -1.28
SMNDC1-204ENST00000471297 ARAFP10398 606 aa7.06□□□□□ -1.28
SMNDC1-204ENST00000471297 PLCD1P51178 756 aa7.06□□□□□ -1.28
SMNDC1-204ENST00000471297 TFAP4Q01664 338 aa7.06□□□□□ -1.28
SMNDC1-204ENST00000471297 SSRP1Q08945 709 aaKnown RBP7.06□□□□□ -1.28
SMNDC1-204ENST00000471297 CFAP100Q494V2 611 aa7.06□□□□□ -1.28
SMNDC1-204ENST00000471297 ZNF468Q5VIY5 522 aaPredicted RBP7.06□□□□□ -1.28
SMNDC1-204ENST00000471297 CIAPIN1Q6FI81 312 aa7.06□□□□□ -1.28
SMNDC1-204ENST00000471297 KRT25Q7Z3Z0 450 aa7.06□□□□□ -1.28
SMNDC1-204ENST00000471297 RAB44Q7Z6P3 723 aaPredicted RBP7.06□□□□□ -1.28
SMNDC1-204ENST00000471297 CATIPQ7Z7H3 387 aa7.06□□□□□ -1.28
SMNDC1-204ENST00000471297 SYT9Q86SS6 491 aa7.06□□□□□ -1.28
SMNDC1-204ENST00000471297 FOXP4Q8IVH2 680 aaPredicted RBP7.06□□□□□ -1.28
SMNDC1-204ENST00000471297 ZNF654Q8IZM8 581 aa7.06□□□□□ -1.28
SMNDC1-204ENST00000471297 FANCBQ8NB91 859 aa7.06□□□□□ -1.28
SMNDC1-204ENST00000471297 TTC16Q8NEE8 873 aa7.06□□□□□ -1.28
SMNDC1-204ENST00000471297 NEDD1Q8NHV4 660 aa7.06□□□□□ -1.28
SMNDC1-204ENST00000471297 WASF1Q92558 559 aa7.06□□□□□ -1.28
SMNDC1-204ENST00000471297 ACDQ96AP0 544 aa7.06□□□□□ -1.28
SMNDC1-204ENST00000471297 DYNLL2Q96FJ2 89 aa7.06□□□□□ -1.28
SMNDC1-204ENST00000471297 CCDC17Q96LX7 622 aa7.06□□□□□ -1.28
SMNDC1-204ENST00000471297 GMLQ99445 158 aa7.06□□□□□ -1.28
SMNDC1-204ENST00000471297 MAP3K14Q99558 947 aa7.06□□□□□ -1.28
SMNDC1-204ENST00000471297 ZKSCAN3Q9BRR0 538 aa7.06□□□□□ -1.28
SMNDC1-204ENST00000471297 OXCT2Q9BYC2 517 aaPredicted RBP7.06□□□□□ -1.28
SMNDC1-204ENST00000471297 OSBPL5Q9H0X9 879 aaPredicted RBP7.06□□□□□ -1.28
SMNDC1-204ENST00000471297 EFCC1Q9HA90 598 aa7.06□□□□□ -1.28
SMNDC1-204ENST00000471297 NCOA5Q9HCD5 579 aaKnown RBP7.06□□□□□ -1.28
SMNDC1-204ENST00000471297 RBM28Q9NW13 759 aaKnown RBP7.06□□□□□ -1.28
SMNDC1-204ENST00000471297 ORC3Q9UBD5 711 aaPredicted RBP7.06□□□□□ -1.28
SMNDC1-204ENST00000471297 SAP30BPQ9UHR5 308 aaKnown RBP7.06□□□□□ -1.28
SMNDC1-204ENST00000471297 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.06□□□□□ -1.28
SMNDC1-204ENST00000471297 SMIM22K7EJ46 135 aa7.05□□□□□ -1.28
SMNDC1-204ENST00000471297 JAK2O60674 1132 aa7.05□□□□□ -1.28
SMNDC1-204ENST00000471297 PRDM1O75626 825 aa7.05□□□□□ -1.28
SMNDC1-204ENST00000471297 TSPY3P0CV98 308 aa7.05□□□□□ -1.28
SMNDC1-204ENST00000471297 TSPY8P0CW00 308 aa7.05□□□□□ -1.28
SMNDC1-204ENST00000471297 IFNAR1P17181 557 aa7.05□□□□□ -1.28
SMNDC1-204ENST00000471297 NCLP19338 710 aaKnown RBP7.05□□□□□ -1.28
SMNDC1-204ENST00000471297 RPS12P25398 132 aaKnown RBP7.05□□□□□ -1.28
SMNDC1-204ENST00000471297 GNAQP50148 359 aa7.05□□□□□ -1.28
SMNDC1-204ENST00000471297 EIF6P56537 245 aaKnown RBP7.05□□□□□ -1.28
SMNDC1-204ENST00000471297 GABPAQ06546 454 aa7.05□□□□□ -1.28
SMNDC1-204ENST00000471297 PICALMQ13492 652 aa7.05□□□□□ -1.28
SMNDC1-204ENST00000471297 DLGAP5Q15398 846 aa7.05□□□□□ -1.28
SMNDC1-204ENST00000471297 NTRK3Q16288 839 aa7.05□□□□□ -1.28
SMNDC1-204ENST00000471297 FAM47AQ5JRC9 791 aa7.05□□□□□ -1.28
SMNDC1-204ENST00000471297 ATL3Q6DD88 541 aa7.05□□□□□ -1.28
SMNDC1-204ENST00000471297 MCTP1Q6DN14 999 aa7.05□□□□□ -1.28
SMNDC1-204ENST00000471297 LYPD4Q6UWN0 246 aa7.05□□□□□ -1.28
SMNDC1-204ENST00000471297 MICU3Q86XE3 530 aa7.05□□□□□ -1.28
SMNDC1-204ENST00000471297 ENAHQ8N8S7 591 aaPredicted RBP7.05□□□□□ -1.28
SMNDC1-204ENST00000471297 FOXD4L4Q8WXT5 416 aaPredicted RBP7.05□□□□□ -1.28
SMNDC1-204ENST00000471297 DDX11Q96FC9 970 aa7.05□□□□□ -1.28
SMNDC1-204ENST00000471297 GZF1Q9H116 711 aaPredicted RBP7.05□□□□□ -1.28
SMNDC1-204ENST00000471297 EHD4Q9H223 541 aa7.05□□□□□ -1.28
SMNDC1-204ENST00000471297 DDX4Q9NQI0 724 aaKnown RBP7.05□□□□□ -1.28
SMNDC1-204ENST00000471297 AVENQ9NQS1 362 aaPredicted RBP7.05□□□□□ -1.28
SMNDC1-204ENST00000471297 TMOD2Q9NZR1 351 aa7.05□□□□□ -1.28
SMNDC1-204ENST00000471297 PI4KBQ9UBF8 816 aa7.05□□□□□ -1.28
SMNDC1-204ENST00000471297 SERPINB13Q9UIV8 391 aa7.05□□□□□ -1.28
SMNDC1-204ENST00000471297 CHD4Q14839 1912 aa7.05□□□□□ -1.28
SMNDC1-204ENST00000471297 STK36Q9NRP7 1315 aa7.04□□□□□ -1.28
SMNDC1-204ENST00000471297 NFKBIEO00221 500 aa7.04□□□□□ -1.28
SMNDC1-204ENST00000471297 FDPSP14324 419 aaKnown RBP7.04□□□□□ -1.28
SMNDC1-204ENST00000471297 CDC27P30260 824 aa7.04□□□□□ -1.28
SMNDC1-204ENST00000471297 KIF5BP33176 963 aa7.04□□□□□ -1.28
SMNDC1-204ENST00000471297 NOVP48745 357 aa7.04□□□□□ -1.28
SMNDC1-204ENST00000471297 AKAP17AQ02040 695 aaKnown RBP7.04□□□□□ -1.28
SMNDC1-204ENST00000471297 CXCL9Q07325 125 aa7.04□□□□□ -1.28
SMNDC1-204ENST00000471297 TRIP4Q15650 581 aaPredicted RBP7.04□□□□□ -1.28
SMNDC1-204ENST00000471297 GOLGA6L1Q8N7Z2 621 aa7.04□□□□□ -1.28
SMNDC1-204ENST00000471297 CTCFLQ8NI51 663 aaPredicted RBP7.04□□□□□ -1.28
SMNDC1-204ENST00000471297 WHAMMQ8TF30 809 aa7.04□□□□□ -1.28
SMNDC1-204ENST00000471297 NUP133Q8WUM0 1156 aa7.04□□□□□ -1.28
SMNDC1-204ENST00000471297 C8orf76Q96K31 380 aa7.04□□□□□ -1.28
SMNDC1-204ENST00000471297 MYL10Q9BUA6 226 aa7.04□□□□□ -1.28
SMNDC1-204ENST00000471297 IGFLR1Q9H665 355 aa7.04□□□□□ -1.28
SMNDC1-204ENST00000471297 KAT14Q9H8E8 782 aa7.04□□□□□ -1.28
SMNDC1-204ENST00000471297 IL17RBQ9NRM6 502 aa7.04□□□□□ -1.28
SMNDC1-204ENST00000471297 ZFATQ9P243 1243 aa7.04□□□□□ -1.28
SMNDC1-204ENST00000471297 GDF2Q9UK05 429 aaPredicted RBP7.04□□□□□ -1.28
SMNDC1-204ENST00000471297 FZD9O00144 591 aa7.03□□□□□ -1.28
SMNDC1-204ENST00000471297 PRPF3O43395 683 aaKnown RBP7.03□□□□□ -1.28
SMNDC1-204ENST00000471297 MYO1BO43795 1136 aa7.03□□□□□ -1.28
SMNDC1-204ENST00000471297 SIN3BO75182 1162 aa7.03□□□□□ -1.28
SMNDC1-204ENST00000471297 DEXIO95424 95 aa7.03□□□□□ -1.28
SMNDC1-204ENST00000471297 CELA2BP08218 269 aaPredicted RBP7.03□□□□□ -1.28
SMNDC1-204ENST00000471297 RARAP10276 462 aa7.03□□□□□ -1.28
SMNDC1-204ENST00000471297 TOP1P11387 765 aaKnown RBP7.03□□□□□ -1.28
SMNDC1-204ENST00000471297 XBP1P17861 261 aa7.03□□□□□ -1.28
SMNDC1-204ENST00000471297 RXRAP19793 462 aa7.03□□□□□ -1.28
SMNDC1-204ENST00000471297 NFKB1P19838 968 aa7.03□□□□□ -1.28
SMNDC1-204ENST00000471297 ADH6P28332 368 aa7.03□□□□□ -1.28
SMNDC1-204ENST00000471297 KRT85P78386 507 aa7.03□□□□□ -1.28
SMNDC1-204ENST00000471297 TROAPQ12815 778 aa7.03□□□□□ -1.28
SMNDC1-204ENST00000471297 RESTQ13127 1097 aa7.03□□□□□ -1.28
SMNDC1-204ENST00000471297 TRIM29Q14134 588 aa7.03□□□□□ -1.28
SMNDC1-204ENST00000471297 SLC4A8Q2Y0W8 1093 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms