RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 DDX41Q9UJV9 622 aaKnown RBP15.62■□□□□ 0.09
HMGN1-211ENST00000471260 SCN10AQ9Y5Y9 1956 aa15.62■□□□□ 0.09
HMGN1-211ENST00000471260 CCDC69A6NI79 296 aa15.61■□□□□ 0.09
HMGN1-211ENST00000471260 SH2B2O14492 632 aaPredicted RBP15.61■□□□□ 0.09
HMGN1-211ENST00000471260 CASTP20810 708 aaKnown RBP15.61■□□□□ 0.09
HMGN1-211ENST00000471260 CYP2C18P33260 490 aa15.61■□□□□ 0.09
HMGN1-211ENST00000471260 LAMC2Q13753 1193 aa15.61■□□□□ 0.09
HMGN1-211ENST00000471260 LY6KQ17RY6 165 aa15.61■□□□□ 0.09
HMGN1-211ENST00000471260 NBPF20Q3BBV1 942 aa15.61■□□□□ 0.09
HMGN1-211ENST00000471260 RASIP1Q5U651 963 aa15.61■□□□□ 0.09
HMGN1-211ENST00000471260 C16orf59Q7L2K0 433 aa15.61■□□□□ 0.09
HMGN1-211ENST00000471260 VSIG10LQ86VR7 867 aa15.61■□□□□ 0.09
HMGN1-211ENST00000471260 RPUSD2Q8IZ73 545 aaKnown RBP15.61■□□□□ 0.09
HMGN1-211ENST00000471260 RRP36Q96EU6 259 aaKnown RBP15.61■□□□□ 0.09
HMGN1-211ENST00000471260 NOC4LQ9BVI4 516 aaKnown RBP15.61■□□□□ 0.09
HMGN1-211ENST00000471260 TRPV6Q9H1D0 765 aa15.61■□□□□ 0.09
HMGN1-211ENST00000471260 MTIF3Q9H2K0 278 aaKnown RBP15.61■□□□□ 0.09
HMGN1-211ENST00000471260 MRVI1Q9Y6F6 885 aa15.61■□□□□ 0.09
HMGN1-211ENST00000471260 BAZ2BQ9UIF8 2168 aaKnown RBP15.6■□□□□ 0.09
HMGN1-211ENST00000471260 KIAA1217Q5T5P2 1943 aa15.6■□□□□ 0.09
HMGN1-211ENST00000471260 STAM2O75886 525 aa15.6■□□□□ 0.09
HMGN1-211ENST00000471260 PFKMP08237 780 aa15.6■□□□□ 0.09
HMGN1-211ENST00000471260 MMP3P08254 477 aa15.6■□□□□ 0.09
HMGN1-211ENST00000471260 ARHGAP1Q07960 439 aa15.6■□□□□ 0.09
HMGN1-211ENST00000471260 PGM5Q15124 567 aa15.6■□□□□ 0.09
HMGN1-211ENST00000471260 DGKDQ16760 1214 aa15.6■□□□□ 0.09
HMGN1-211ENST00000471260 TSGA10IPQ3SY00 556 aa15.6■□□□□ 0.09
HMGN1-211ENST00000471260 NFXL1Q6ZNB6 911 aa15.6■□□□□ 0.09
HMGN1-211ENST00000471260 ZNF365Q70YC5 407 aa15.6■□□□□ 0.09
HMGN1-211ENST00000471260 AFG1LQ8WV93 481 aa15.6■□□□□ 0.09
HMGN1-211ENST00000471260 HERVK_113Q902F9 699 aa15.6■□□□□ 0.09
HMGN1-211ENST00000471260 SEMA6BQ9H3T3 888 aa15.6■□□□□ 0.09
HMGN1-211ENST00000471260 SEC63Q9UGP8 760 aaKnown RBP15.6■□□□□ 0.09
HMGN1-211ENST00000471260 FGBP02675 491 aa15.59■□□□□ 0.09
HMGN1-211ENST00000471260 CCND2P30279 289 aa15.59■□□□□ 0.09
HMGN1-211ENST00000471260 HOXA13P31271 388 aaPredicted RBP15.59■□□□□ 0.09
HMGN1-211ENST00000471260 SESTD1Q86VW0 696 aa15.59■□□□□ 0.09
HMGN1-211ENST00000471260 PPTC7Q8NI37 304 aa15.59■□□□□ 0.09
HMGN1-211ENST00000471260 GUCD1Q96NT3 240 aa15.59■□□□□ 0.09
HMGN1-211ENST00000471260 KATNAL1Q9BW62 490 aa15.59■□□□□ 0.09
HMGN1-211ENST00000471260 TRMT13Q9NUP7 481 aaKnown RBP15.59■□□□□ 0.09
HMGN1-211ENST00000471260 SLC12A7Q9Y666 1083 aa15.59■□□□□ 0.09
HMGN1-211ENST00000471260 PITPNM1O00562 1244 aa15.58■□□□□ 0.08
HMGN1-211ENST00000471260 CDC45O75419 566 aa15.58■□□□□ 0.08
HMGN1-211ENST00000471260 MYCLP12524 364 aaPredicted RBP15.58■□□□□ 0.08
HMGN1-211ENST00000471260 GNPTABQ3T906 1256 aa15.58■□□□□ 0.08
HMGN1-211ENST00000471260 FAM47CQ5HY64 1035 aa15.58■□□□□ 0.08
HMGN1-211ENST00000471260 SGMS1Q86VZ5 419 aa15.58■□□□□ 0.08
HMGN1-211ENST00000471260 DHX37Q8IY37 1157 aaKnown RBP15.58■□□□□ 0.08
HMGN1-211ENST00000471260 FRMPD4Q14CM0 1322 aa15.58■□□□□ 0.08
HMGN1-211ENST00000471260 PIK3CDO00329 1044 aa15.57■□□□□ 0.08
HMGN1-211ENST00000471260 PPFIA4O75335 1185 aa15.57■□□□□ 0.08
HMGN1-211ENST00000471260 RGS20O76081 388 aa15.57■□□□□ 0.08
HMGN1-211ENST00000471260 ACRP10323 421 aa15.57■□□□□ 0.08
HMGN1-211ENST00000471260 RFC2P35250 354 aa15.57■□□□□ 0.08
HMGN1-211ENST00000471260 CCL23P55773 120 aa15.57■□□□□ 0.08
HMGN1-211ENST00000471260 BFSP2Q13515 415 aa15.57■□□□□ 0.08
HMGN1-211ENST00000471260 KRT32Q14532 448 aa15.57■□□□□ 0.08
HMGN1-211ENST00000471260 MYSM1Q5VVJ2 828 aa15.57■□□□□ 0.08
HMGN1-211ENST00000471260 XRRA1Q6P2D8 792 aa15.57■□□□□ 0.08
HMGN1-211ENST00000471260 SYNE3Q6ZMZ3 975 aa15.57■□□□□ 0.08
HMGN1-211ENST00000471260 FCHSD1Q86WN1 690 aa15.57■□□□□ 0.08
HMGN1-211ENST00000471260 SLC17A8Q8NDX2 589 aa15.57■□□□□ 0.08
HMGN1-211ENST00000471260 CUL5Q93034 780 aa15.57■□□□□ 0.08
HMGN1-211ENST00000471260 NEK1Q96PY6 1258 aa15.57■□□□□ 0.08
HMGN1-211ENST00000471260 MYL10Q9BUA6 226 aa15.57■□□□□ 0.08
HMGN1-211ENST00000471260 WNT8AQ9H1J5 351 aa15.57■□□□□ 0.08
HMGN1-211ENST00000471260 UMODL1Q5DID0 1318 aa15.57■□□□□ 0.08
HMGN1-211ENST00000471260 LAMA2P24043 3122 aaKnown RBP15.56■□□□□ 0.08
HMGN1-211ENST00000471260 CYP2C9P11712 490 aa15.56■□□□□ 0.08
HMGN1-211ENST00000471260 HOXD8P13378 290 aaPredicted RBP15.56■□□□□ 0.08
HMGN1-211ENST00000471260 DNAJB2P25686 324 aa15.56■□□□□ 0.08
HMGN1-211ENST00000471260 ICAM3P32942 547 aa15.56■□□□□ 0.08
HMGN1-211ENST00000471260 CELF3Q5SZQ8 465 aaKnown RBP15.56■□□□□ 0.08
HMGN1-211ENST00000471260 SRBD1Q8N5C6 995 aaKnown RBP15.56■□□□□ 0.08
HMGN1-211ENST00000471260 FANCBQ8NB91 859 aa15.56■□□□□ 0.08
HMGN1-211ENST00000471260 RETREG2Q8NC44 543 aa15.56■□□□□ 0.08
HMGN1-211ENST00000471260 KAT2BQ92831 832 aa15.56■□□□□ 0.08
HMGN1-211ENST00000471260 FAM161BQ96MY7 647 aa15.56■□□□□ 0.08
HMGN1-211ENST00000471260 TTYH1Q9H313 450 aaPredicted RBP15.56■□□□□ 0.08
HMGN1-211ENST00000471260 NOD1Q9Y239 953 aa15.56■□□□□ 0.08
HMGN1-211ENST00000471260 COL6A3P12111 3177 aa15.55■□□□□ 0.08
HMGN1-211ENST00000471260 PLEKHA8P1O95397 391 aa15.55■□□□□ 0.08
HMGN1-211ENST00000471260 PARNO95453 639 aaKnown RBP15.55■□□□□ 0.08
HMGN1-211ENST00000471260 F2P00734 622 aa15.55■□□□□ 0.08
HMGN1-211ENST00000471260 HMGB1P09429 215 aaKnown RBP15.55■□□□□ 0.08
HMGN1-211ENST00000471260 PTGISQ16647 500 aa15.55■□□□□ 0.08
HMGN1-211ENST00000471260 DHX32Q7L7V1 743 aaKnown RBP15.55■□□□□ 0.08
HMGN1-211ENST00000471260 TEX2Q8IWB9 1127 aa15.55■□□□□ 0.08
HMGN1-211ENST00000471260 CCDC155Q8N6L0 562 aa15.55■□□□□ 0.08
HMGN1-211ENST00000471260 SMARCC2Q8TAQ2 1214 aa15.55■□□□□ 0.08
HMGN1-211ENST00000471260 CAGE1Q8TC20 777 aa15.55■□□□□ 0.08
HMGN1-211ENST00000471260 PIBF1Q8WXW3 757 aa15.55■□□□□ 0.08
HMGN1-211ENST00000471260 TIFAQ96CG3 184 aa15.55■□□□□ 0.08
HMGN1-211ENST00000471260 INPP4AQ96PE3 977 aaPredicted RBP15.55■□□□□ 0.08
HMGN1-211ENST00000471260 CDX2Q99626 313 aaPredicted RBP15.55■□□□□ 0.08
HMGN1-211ENST00000471260 RBM28Q9NW13 759 aaKnown RBP15.55■□□□□ 0.08
HMGN1-211ENST00000471260 GTF2IRD1Q9UHL9 959 aa15.55■□□□□ 0.08
HMGN1-211ENST00000471260 HAS3O00219 553 aa15.54■□□□□ 0.08
HMGN1-211ENST00000471260 MEIS2O14770 477 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms