RNA–Protein interactions for RNA: ENST00000471250.5

U2AF1-208, Transcript of U2 small nuclear RNA auxiliary factor 1, human

TSL 2

Gene U2AF1, Length 1,676 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1-208	ENST00000471250	KRT79	Q5XKE5	535 aa		29.22	■■■□□ 2.27
U2AF1-208	ENST00000471250	PROCA1	Q8NCQ7	364 aa	Predicted RBP	29.22	■■■□□ 2.27
U2AF1-208	ENST00000471250	LRRC15	Q8TF66	581 aa		29.22	■■■□□ 2.27
U2AF1-208	ENST00000471250	STAM	Q92783	540 aa		29.22	■■■□□ 2.27
U2AF1-208	ENST00000471250	PLIN2	Q99541	437 aa		29.22	■■■□□ 2.27
U2AF1-208	ENST00000471250	HOMER2	Q9NSB8	354 aa		29.22	■■■□□ 2.27
U2AF1-208	ENST00000471250	ZNF214	Q9UL59	606 aa	Predicted RBP	29.22	■■■□□ 2.27
U2AF1-208	ENST00000471250	KCNH4	Q9UQ05	1017 aa		29.22	■■■□□ 2.27
U2AF1-208	ENST00000471250	IGLV3-22	A0A075B6J6	115 aa		29.21	■■■□□ 2.27
U2AF1-208	ENST00000471250	GRB10	Q13322	594 aa		29.21	■■■□□ 2.27
U2AF1-208	ENST00000471250	TMEM132B	Q14DG7	1078 aa		29.21	■■■□□ 2.27
U2AF1-208	ENST00000471250	TREML2	Q5T2D2	321 aa		29.21	■■■□□ 2.27
U2AF1-208	ENST00000471250	LDLRAD1	Q5T700	205 aa		29.21	■■■□□ 2.27
U2AF1-208	ENST00000471250	KBTBD4	Q9NVX7	518 aa		29.21	■■■□□ 2.27
U2AF1-208	ENST00000471250	COL20A1	Q9P218	1284 aa		29.21	■■■□□ 2.27
U2AF1-208	ENST00000471250	CASP1	P29466	404 aa		29.21	■■■□□ 2.27
U2AF1-208	ENST00000471250	SYTL5	Q8TDW5	730 aa	Predicted RBP	29.21	■■■□□ 2.27
U2AF1-208	ENST00000471250	PNMA5	Q96PV4	448 aa		29.21	■■■□□ 2.27
U2AF1-208	ENST00000471250	RNF146	Q9NTX7	359 aa		29.21	■■■□□ 2.27
U2AF1-208	ENST00000471250	RIPK3	Q9Y572	518 aa		29.21	■■■□□ 2.27
U2AF1-208	ENST00000471250	BECN2	A8MW95	431 aa		29.2	■■■□□ 2.26
U2AF1-208	ENST00000471250	GOLGA6L19	H0YKK7	550 aa		29.2	■■■□□ 2.26
U2AF1-208	ENST00000471250	MSH4	O15457	936 aa		29.2	■■■□□ 2.26
U2AF1-208	ENST00000471250	SLC26A4	O43511	780 aa		29.2	■■■□□ 2.26
U2AF1-208	ENST00000471250	HOXA7	P31268	230 aa	Predicted RBP	29.2	■■■□□ 2.26
U2AF1-208	ENST00000471250	TKFC	Q3LXA3	575 aa		29.2	■■■□□ 2.26
U2AF1-208	ENST00000471250	MAP1S	Q66K74	1059 aa	Predicted RBP	29.2	■■■□□ 2.26
U2AF1-208	ENST00000471250	SNRNP48	Q6IEG0	339 aa	Known RBP	29.2	■■■□□ 2.26
U2AF1-208	ENST00000471250	GADL1	Q6ZQY3	521 aa		29.2	■■■□□ 2.26
U2AF1-208	ENST00000471250	AOPEP	Q8N6M6	819 aa		29.2	■■■□□ 2.26
U2AF1-208	ENST00000471250	CYP2W1	Q8TAV3	490 aa		29.2	■■■□□ 2.26
U2AF1-208	ENST00000471250	SNX29	Q8TEQ0	813 aa		29.2	■■■□□ 2.26
U2AF1-208	ENST00000471250	AP5Z1	O43299	807 aa		29.19	■■■□□ 2.26
U2AF1-208	ENST00000471250	MYL1	P05976	194 aa		29.19	■■■□□ 2.26
U2AF1-208	ENST00000471250	CUL4B	Q13620	913 aa		29.19	■■■□□ 2.26
U2AF1-208	ENST00000471250	MLKL	Q8NB16	471 aa		29.19	■■■□□ 2.26
U2AF1-208	ENST00000471250	UNCX	A6NJT0	531 aa		29.18	■■■□□ 2.26
U2AF1-208	ENST00000471250	UBXN2A	P68543	259 aa		29.18	■■■□□ 2.26
U2AF1-208	ENST00000471250	NUDT12	Q9BQG2	462 aa		29.18	■■■□□ 2.26
U2AF1-208	ENST00000471250	TEX13B	Q9BXU2	312 aa		29.18	■■■□□ 2.26
U2AF1-208	ENST00000471250	BLZF1	Q9H2G9	400 aa		29.18	■■■□□ 2.26
U2AF1-208	ENST00000471250	RRAGC	Q9HB90	399 aa		29.18	■■■□□ 2.26
U2AF1-208	ENST00000471250	STK17A	Q9UEE5	414 aa		29.18	■■■□□ 2.26
U2AF1-208	ENST00000471250	FRMPD4	Q14CM0	1322 aa		29.18	■■■□□ 2.26
U2AF1-208	ENST00000471250	RPS6	P62753	249 aa	Known RBP	29.18	■■■□□ 2.26
U2AF1-208	ENST00000471250	TMEM119	Q4V9L6	283 aa		29.18	■■■□□ 2.26
U2AF1-208	ENST00000471250	CEP55	Q53EZ4	464 aa		29.18	■■■□□ 2.26
U2AF1-208	ENST00000471250	HYI	Q5T013	277 aa		29.18	■■■□□ 2.26
U2AF1-208	ENST00000471250	RNF207	Q6ZRF8	634 aa		29.18	■■■□□ 2.26
U2AF1-208	ENST00000471250	PLA2G4D	Q86XP0	818 aa		29.18	■■■□□ 2.26
U2AF1-208	ENST00000471250	OPTN	Q96CV9	577 aa		29.18	■■■□□ 2.26
U2AF1-208	ENST00000471250	CDK5RAP3	Q96JB5	506 aa		29.18	■■■□□ 2.26
U2AF1-208	ENST00000471250	UIMC1	Q96RL1	719 aa		29.18	■■■□□ 2.26
U2AF1-208	ENST00000471250	SPIRE1	Q08AE8	756 aa		29.17	■■■□□ 2.26
U2AF1-208	ENST00000471250	SLC30A10	Q6XR72	485 aa		29.17	■■■□□ 2.26
U2AF1-208	ENST00000471250	MAF1	Q9H063	256 aa		29.17	■■■□□ 2.26
U2AF1-208	ENST00000471250	DACH1	Q9UI36	760 aa		29.17	■■■□□ 2.26
U2AF1-208	ENST00000471250		A0A0G2JMZ2	1700 aa		29.17	■■■□□ 2.26
U2AF1-208	ENST00000471250	SMTNL1	A8MU46	457 aa		29.16	■■■□□ 2.26
U2AF1-208	ENST00000471250	TRAF5	O00463	557 aa		29.16	■■■□□ 2.26
U2AF1-208	ENST00000471250	MEIS1	O00470	390 aa		29.16	■■■□□ 2.26
U2AF1-208	ENST00000471250	ADCY5	O95622	1261 aa		29.16	■■■□□ 2.26
U2AF1-208	ENST00000471250	IKBKB	O14920	756 aa		29.15	■■■□□ 2.26
U2AF1-208	ENST00000471250	STAT3	P40763	770 aa		29.15	■■■□□ 2.26
U2AF1-208	ENST00000471250	SET	Q01105	290 aa	Predicted RBP	29.15	■■■□□ 2.26
U2AF1-208	ENST00000471250	NSMF	Q6X4W1	530 aa		29.15	■■■□□ 2.26
U2AF1-208	ENST00000471250	TAAR1	Q96RJ0	339 aa		29.15	■■■□□ 2.26
U2AF1-208	ENST00000471250	MXRA8	Q9BRK3	442 aa		29.15	■■■□□ 2.26
U2AF1-208	ENST00000471250	BLOC1S4	Q9NUP1	217 aa		29.15	■■■□□ 2.26
U2AF1-208	ENST00000471250	STK24	Q9Y6E0	443 aa		29.15	■■■□□ 2.26
U2AF1-208	ENST00000471250	KDM3A	Q9Y4C1	1321 aa		29.15	■■■□□ 2.26
U2AF1-208	ENST00000471250	RPN1	P04843	607 aa	Known RBP	29.15	■■■□□ 2.26
U2AF1-208	ENST00000471250	PLCB2	Q00722	1185 aa		29.15	■■■□□ 2.26
U2AF1-208	ENST00000471250	LBX2	Q6XYB7	198 aa		29.15	■■■□□ 2.26
U2AF1-208	ENST00000471250	RMND1	Q9NWS8	449 aa		29.15	■■■□□ 2.26
U2AF1-208	ENST00000471250	VAV3	Q9UKW4	847 aa		29.15	■■■□□ 2.26
U2AF1-208	ENST00000471250	SRCAP	Q6ZRS2	3230 aa		29.15	■■■□□ 2.26
U2AF1-208	ENST00000471250	CCT6A	P40227	531 aa	Known RBP	29.14	■■■□□ 2.26
U2AF1-208	ENST00000471250	FMR1	Q06787	632 aa	Known RBP eCLIP	29.14	■■■□□ 2.26
U2AF1-208	ENST00000471250	NCAPH	Q15003	741 aa		29.14	■■■□□ 2.26
U2AF1-208	ENST00000471250	CT47A1	Q5JQC4	288 aa	Predicted RBP	29.14	■■■□□ 2.26
U2AF1-208	ENST00000471250	PCNX4	Q63HM2	1172 aa		29.14	■■■□□ 2.26
U2AF1-208	ENST00000471250	NIPA1	Q7RTP0	329 aa		29.14	■■■□□ 2.26
U2AF1-208	ENST00000471250	MB21D1	Q8N884	522 aa		29.14	■■■□□ 2.26
U2AF1-208	ENST00000471250	SLC5A5	Q92911	643 aa		29.14	■■■□□ 2.26
U2AF1-208	ENST00000471250	C7orf25	Q9BPX7	421 aa		29.14	■■■□□ 2.26
U2AF1-208	ENST00000471250	NT5C3A	Q9H0P0	336 aa		29.14	■■■□□ 2.26
U2AF1-208	ENST00000471250	AGTPBP1	Q9UPW5	1226 aa		29.14	■■■□□ 2.26
U2AF1-208	ENST00000471250	AMPD3	Q01432	767 aa		29.13	■■■□□ 2.25
U2AF1-208	ENST00000471250	MOGS	Q13724	837 aa		29.13	■■■□□ 2.25
U2AF1-208	ENST00000471250	BAAT	Q14032	418 aa	Predicted RBP	29.13	■■■□□ 2.25
U2AF1-208	ENST00000471250	ECM1	Q16610	540 aa		29.13	■■■□□ 2.25
U2AF1-208	ENST00000471250	RAD54L	Q92698	747 aa		29.13	■■■□□ 2.25
U2AF1-208	ENST00000471250	ACAD9	Q9H845	621 aa		29.13	■■■□□ 2.25
U2AF1-208	ENST00000471250	ZNF408	Q9H9D4	720 aa		29.13	■■■□□ 2.25
U2AF1-208	ENST00000471250	BCR	P11274	1271 aa		29.12	■■■□□ 2.25
U2AF1-208	ENST00000471250	SEMA3F	Q13275	785 aa		29.12	■■■□□ 2.25
U2AF1-208	ENST00000471250	POTEE	Q6S8J3	1075 aa		29.12	■■■□□ 2.25
U2AF1-208	ENST00000471250	SV2B	Q7L1I2	683 aa		29.12	■■■□□ 2.25
U2AF1-208	ENST00000471250	FASTKD5	Q7L8L6	764 aa	Known RBP	29.12	■■■□□ 2.25

Retrieved 100 of 20,778 RNA–protein pairs in 139.3 ms