RNA–Protein interactions for RNA: ENST00000470710.1

HDLBP-233, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-233ENST00000470710 HPSEQ9Y251 543 aa9.86□□□□□ -0.83
HDLBP-233ENST00000470710 IGLV3-22A0A075B6J6 115 aa9.85□□□□□ -0.83
HDLBP-233ENST00000470710 VWA3AA6NCI4 1184 aa9.85□□□□□ -0.83
HDLBP-233ENST00000470710 MEIS1O00470 390 aa9.85□□□□□ -0.83
HDLBP-233ENST00000470710 NR1I2O75469 434 aa9.85□□□□□ -0.83
HDLBP-233ENST00000470710 BCRP11274 1271 aa9.85□□□□□ -0.83
HDLBP-233ENST00000470710 PFKFB1P16118 471 aa9.85□□□□□ -0.83
HDLBP-233ENST00000470710 ZNF76P36508 570 aa9.85□□□□□ -0.83
HDLBP-233ENST00000470710 TM4SF4P48230 202 aa9.85□□□□□ -0.83
HDLBP-233ENST00000470710 FXR2P51116 673 aaKnown RBP eCLIP9.85□□□□□ -0.839e-11■□□□□ 9.9
HDLBP-233ENST00000470710 NDUFA8P51970 172 aa9.85□□□□□ -0.83
HDLBP-233ENST00000470710 NOGQ13253 232 aa9.85□□□□□ -0.83
HDLBP-233ENST00000470710 SNW1Q13573 536 aaKnown RBP9.85□□□□□ -0.83
HDLBP-233ENST00000470710 PGM5Q15124 567 aa9.85□□□□□ -0.83
HDLBP-233ENST00000470710 PRR16Q569H4 304 aa9.85□□□□□ -0.83
HDLBP-233ENST00000470710 CCDC183Q5T5S1 534 aa9.85□□□□□ -0.83
HDLBP-233ENST00000470710 ARHGEF16Q5VV41 709 aa9.85□□□□□ -0.83
HDLBP-233ENST00000470710 CAVIN1Q6NZI2 390 aaKnown RBP9.85□□□□□ -0.83
HDLBP-233ENST00000470710 SLFN12Q8IYM2 578 aa9.85□□□□□ -0.83
HDLBP-233ENST00000470710 FMR1NBQ8N0W7 255 aaPredicted RBP9.85□□□□□ -0.83
HDLBP-233ENST00000470710 ABRAQ8N0Z2 381 aa9.85□□□□□ -0.83
HDLBP-233ENST00000470710 ANKRD35Q8N283 1001 aa9.85□□□□□ -0.83
HDLBP-233ENST00000470710 ANKRD13CQ8N6S4 541 aa9.85□□□□□ -0.83
HDLBP-233ENST00000470710 IL31RAQ8NI17 732 aa9.85□□□□□ -0.83
HDLBP-233ENST00000470710 HAS1Q92839 578 aa9.85□□□□□ -0.83
HDLBP-233ENST00000470710 IWS1Q96ST2 819 aa9.85□□□□□ -0.83
HDLBP-233ENST00000470710 MXRA8Q9BRK3 442 aa9.85□□□□□ -0.83
HDLBP-233ENST00000470710 DACT1Q9NYF0 836 aa9.85□□□□□ -0.83
HDLBP-233ENST00000470710 TMEM63CQ9P1W3 806 aa9.85□□□□□ -0.83
HDLBP-233ENST00000470710 UBIAD1Q9Y5Z9 338 aa9.85□□□□□ -0.83
HDLBP-233ENST00000470710 DNAJC25-GNG10A0A024R161 153 aa9.84□□□□□ -0.83
HDLBP-233ENST00000470710 LOC102724159A0A0B4J2E5 919 aa9.84□□□□□ -0.83
HDLBP-233ENST00000470710 A0A1B0GVL5 298 aa9.84□□□□□ -0.83
HDLBP-233ENST00000470710 POTEB2H3BUK9 544 aa9.84□□□□□ -0.83
HDLBP-233ENST00000470710 STAM2O75886 525 aa9.84□□□□□ -0.83
HDLBP-233ENST00000470710 NR3C2P08235 984 aa9.84□□□□□ -0.83
HDLBP-233ENST00000470710 FCER1AP12319 257 aa9.84□□□□□ -0.83
HDLBP-233ENST00000470710 EIF2AK2P19525 551 aaKnown RBP9.84□□□□□ -0.83
HDLBP-233ENST00000470710 CCND2P30279 289 aa9.84□□□□□ -0.83
HDLBP-233ENST00000470710 SYKP43405 635 aa9.84□□□□□ -0.83
HDLBP-233ENST00000470710 PDIA5Q14554 519 aa9.84□□□□□ -0.83
HDLBP-233ENST00000470710 PWP2Q15269 919 aaKnown RBP9.84□□□□□ -0.83
HDLBP-233ENST00000470710 TAF1CQ15572 869 aaPredicted RBP9.84□□□□□ -0.83
HDLBP-233ENST00000470710 TMEM266Q2M3C6 531 aa9.84□□□□□ -0.83
HDLBP-233ENST00000470710 TPRNQ4KMQ1 711 aa9.84□□□□□ -0.83
HDLBP-233ENST00000470710 VSIG10LQ86VR7 867 aa9.84□□□□□ -0.83
HDLBP-233ENST00000470710 PLA2G4DQ86XP0 818 aa9.84□□□□□ -0.83
HDLBP-233ENST00000470710 REM2Q8IYK8 340 aaPredicted RBP9.84□□□□□ -0.83
HDLBP-233ENST00000470710 IGSF22Q8N9C0 903 aa9.84□□□□□ -0.83
HDLBP-233ENST00000470710 FAM133AQ8N9E0 248 aa9.84□□□□□ -0.83
HDLBP-233ENST00000470710 SYMPKQ92797 1274 aaKnown RBP9.84□□□□□ -0.83
HDLBP-233ENST00000470710 TIGD1Q96MW7 591 aa9.84□□□□□ -0.83
HDLBP-233ENST00000470710 MMP19Q99542 508 aa9.84□□□□□ -0.83
HDLBP-233ENST00000470710 PYM1Q9BRP8 204 aaKnown RBP9.84□□□□□ -0.83
HDLBP-233ENST00000470710 RAB34Q9BZG1 259 aa9.84□□□□□ -0.83
HDLBP-233ENST00000470710 PORCNQ9H237 461 aa9.84□□□□□ -0.83
HDLBP-233ENST00000470710 CLSTN2Q9H4D0 955 aa9.84□□□□□ -0.83
HDLBP-233ENST00000470710 ADD3Q9UEY8 706 aaKnown RBP9.84□□□□□ -0.83
HDLBP-233ENST00000470710 KCNH3Q9ULD8 1083 aa9.84□□□□□ -0.83
HDLBP-233ENST00000470710 MSH4O15457 936 aa9.83□□□□□ -0.84
HDLBP-233ENST00000470710 SLC26A4O43511 780 aa9.83□□□□□ -0.84
HDLBP-233ENST00000470710 STRNO43815 780 aa9.83□□□□□ -0.84
HDLBP-233ENST00000470710 MARCH6O60337 910 aa9.83□□□□□ -0.84
HDLBP-233ENST00000470710 TLR2O60603 784 aa9.83□□□□□ -0.84
HDLBP-233ENST00000470710 KINO60870 393 aaKnown RBP9.83□□□□□ -0.84
HDLBP-233ENST00000470710 ZNF202O95125 648 aa9.83□□□□□ -0.84
HDLBP-233ENST00000470710 ALDH1A1P00352 501 aa9.83□□□□□ -0.84
HDLBP-233ENST00000470710 ITGB5P18084 799 aa9.83□□□□□ -0.84
HDLBP-233ENST00000470710 EDNRBP24530 442 aa9.83□□□□□ -0.84
HDLBP-233ENST00000470710 MAPK4P31152 587 aa9.83□□□□□ -0.84
HDLBP-233ENST00000470710 TXLNAP40222 546 aa9.83□□□□□ -0.84
HDLBP-233ENST00000470710 TXKP42681 527 aa9.83□□□□□ -0.84
HDLBP-233ENST00000470710 UBXN2AP68543 259 aa9.83□□□□□ -0.84
HDLBP-233ENST00000470710 MRPS9P82933 396 aaKnown RBP9.83□□□□□ -0.84
HDLBP-233ENST00000470710 KCTD2Q14681 263 aa9.83□□□□□ -0.84
HDLBP-233ENST00000470710 DEFB115Q30KQ5 88 aa9.83□□□□□ -0.84
HDLBP-233ENST00000470710 SPECC1Q5M775 1068 aa9.83□□□□□ -0.84
HDLBP-233ENST00000470710 CYP4F22Q6NT55 531 aa9.83□□□□□ -0.84
HDLBP-233ENST00000470710 USP49Q70CQ1 688 aa9.83□□□□□ -0.84
HDLBP-233ENST00000470710 ELOA2Q8IYF1 753 aaPredicted RBP9.83□□□□□ -0.84
HDLBP-233ENST00000470710 CYP2W1Q8TAV3 490 aa9.83□□□□□ -0.84
HDLBP-233ENST00000470710 SLC5A5Q92911 643 aa9.83□□□□□ -0.84
HDLBP-233ENST00000470710 GPRASP2Q96D09 838 aa9.83□□□□□ -0.84
HDLBP-233ENST00000470710 EPSTI1Q96J88 318 aa9.83□□□□□ -0.84
HDLBP-233ENST00000470710 CAPNS2Q96L46 248 aa9.83□□□□□ -0.84
HDLBP-233ENST00000470710 CCSER1Q9C0I3 900 aa9.83□□□□□ -0.84
HDLBP-233ENST00000470710 NUP62CLQ9H1M0 184 aa9.83□□□□□ -0.84
HDLBP-233ENST00000470710 R3HDMLQ9H3Y0 253 aa9.83□□□□□ -0.84
HDLBP-233ENST00000470710 TTC12Q9H892 705 aaPredicted RBP9.83□□□□□ -0.84
HDLBP-233ENST00000470710 EFCC1Q9HA90 598 aa9.83□□□□□ -0.84
HDLBP-233ENST00000470710 ZFYVE28Q9HCC9 887 aa9.83□□□□□ -0.84
HDLBP-233ENST00000470710 JADE2Q9NQC1 790 aa9.83□□□□□ -0.84
HDLBP-233ENST00000470710 USP25Q9UHP3 1055 aa9.83□□□□□ -0.84
HDLBP-233ENST00000470710 COL11A1P12107 1806 aaPredicted RBP9.83□□□□□ -0.84
HDLBP-233ENST00000470710 SOWAHBA6NEL2 793 aa9.82□□□□□ -0.84
HDLBP-233ENST00000470710 B4DLN1 442 aa9.82□□□□□ -0.84
HDLBP-233ENST00000470710 CTAGE5O15320 804 aa9.82□□□□□ -0.84
HDLBP-233ENST00000470710 MAFGO15525 162 aa9.82□□□□□ -0.84
HDLBP-233ENST00000470710 CA12O43570 354 aa9.82□□□□□ -0.84
HDLBP-233ENST00000470710 LETM1O95202 739 aaPredicted RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms