RNA–Protein interactions for RNA: ENST00000470188.5

CDHR3-207, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 2,199 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-207ENST00000470188 EPN1Q9Y6I3 576 aaPredicted RBP22.39■■□□□ 1.17
CDHR3-207ENST00000470188 GREB1LQ9C091 1923 aaPredicted RBP22.38■■□□□ 1.17
CDHR3-207ENST00000470188 CTAGE9A4FU28 777 aa22.38■■□□□ 1.17
CDHR3-207ENST00000470188 RPS6KA5O75582 802 aa22.38■■□□□ 1.17
CDHR3-207ENST00000470188 NDUFA10O95299 355 aa22.38■■□□□ 1.17
CDHR3-207ENST00000470188 ARHGAP25P42331 645 aa22.38■■□□□ 1.17
CDHR3-207ENST00000470188 TBC1D8BQ0IIM8 1120 aa22.38■■□□□ 1.17
CDHR3-207ENST00000470188 SRLQ86TD4 932 aa22.38■■□□□ 1.17
CDHR3-207ENST00000470188 SLC35F6Q8N357 371 aa22.38■■□□□ 1.17
CDHR3-207ENST00000470188 GBP3Q9H0R5 595 aa22.38■■□□□ 1.17
CDHR3-207ENST00000470188 CACNB3P54284 484 aa22.38■■□□□ 1.17
CDHR3-207ENST00000470188 TCP10Q12799 353 aa22.38■■□□□ 1.17
CDHR3-207ENST00000470188 DYMQ7RTS9 669 aa22.38■■□□□ 1.17
CDHR3-207ENST00000470188 KIAA0825Q8IV33 1275 aa22.38■■□□□ 1.17
CDHR3-207ENST00000470188 NUDT12Q9BQG2 462 aa22.38■■□□□ 1.17
CDHR3-207ENST00000470188 NOC4LQ9BVI4 516 aaKnown RBP22.38■■□□□ 1.17
CDHR3-207ENST00000470188 NUP58Q9BVL2 599 aa22.38■■□□□ 1.17
CDHR3-207ENST00000470188 SEMA6BQ9H3T3 888 aa22.38■■□□□ 1.17
CDHR3-207ENST00000470188 EFCC1Q9HA90 598 aa22.38■■□□□ 1.17
CDHR3-207ENST00000470188 MYO1AQ9UBC5 1043 aa22.38■■□□□ 1.17
CDHR3-207ENST00000470188 RAD21O60216 631 aa22.37■■□□□ 1.17
CDHR3-207ENST00000470188 ABL1P00519 1130 aa22.37■■□□□ 1.17
CDHR3-207ENST00000470188 TRIM21P19474 475 aaKnown RBP22.37■■□□□ 1.17
CDHR3-207ENST00000470188 KIF4BQ2VIQ3 1234 aa22.37■■□□□ 1.17
CDHR3-207ENST00000470188 TMEM119Q4V9L6 283 aa22.37■■□□□ 1.17
CDHR3-207ENST00000470188 CENPPQ6IPU0 288 aa22.37■■□□□ 1.17
CDHR3-207ENST00000470188 RETREG2Q8NC44 543 aa22.37■■□□□ 1.17
CDHR3-207ENST00000470188 DHX36Q9H2U1 1008 aaKnown RBP22.37■■□□□ 1.17
CDHR3-207ENST00000470188 PDE11AQ9HCR9 933 aa22.37■■□□□ 1.17
CDHR3-207ENST00000470188 GCFC2P16383 781 aaKnown RBP22.36■■□□□ 1.17
CDHR3-207ENST00000470188 GYS2P54840 703 aa22.36■■□□□ 1.17
CDHR3-207ENST00000470188 TTYH3Q9C0H2 523 aa22.36■■□□□ 1.17
CDHR3-207ENST00000470188 LRRC27Q9C0I9 530 aa22.36■■□□□ 1.17
CDHR3-207ENST00000470188 L1RE1Q9UN81 338 aa22.36■■□□□ 1.17
CDHR3-207ENST00000470188 PCDHAC2Q9Y5I4 1007 aa22.36■■□□□ 1.17
CDHR3-207ENST00000470188 MYH4Q9Y623 1939 aa22.36■■□□□ 1.17
CDHR3-207ENST00000470188 FAM196BA6NMK8 535 aa22.36■■□□□ 1.17
CDHR3-207ENST00000470188 MARCH6O60337 910 aa22.36■■□□□ 1.17
CDHR3-207ENST00000470188 MIIPQ5JXC2 388 aa22.36■■□□□ 1.17
CDHR3-207ENST00000470188 HAS1Q92839 578 aa22.36■■□□□ 1.17
CDHR3-207ENST00000470188 VPS18Q9P253 973 aa22.36■■□□□ 1.17
CDHR3-207ENST00000470188 REXO2Q9Y3B8 237 aaKnown RBP22.36■■□□□ 1.17
CDHR3-207ENST00000470188 EEF2P13639 858 aaKnown RBP22.35■■□□□ 1.17
CDHR3-207ENST00000470188 RBM5P52756 815 aaKnown RBP eCLIP22.35■■□□□ 1.17
CDHR3-207ENST00000470188 CERKLQ49MI3 558 aaPredicted RBP22.35■■□□□ 1.17
CDHR3-207ENST00000470188 WDR59Q6PJI9 974 aa22.35■■□□□ 1.17
CDHR3-207ENST00000470188 KCNK18Q7Z418 384 aa22.35■■□□□ 1.17
CDHR3-207ENST00000470188 ZSCAN29Q8IWY8 852 aaPredicted RBP22.35■■□□□ 1.17
CDHR3-207ENST00000470188 FLAD1Q8NFF5 587 aa22.35■■□□□ 1.17
CDHR3-207ENST00000470188 PCMTD1Q96MG8 357 aaPredicted RBP22.35■■□□□ 1.17
CDHR3-207ENST00000470188 MRIQ9BWK5 157 aa22.35■■□□□ 1.17
CDHR3-207ENST00000470188 IDEP14735 1019 aa22.35■■□□□ 1.17
CDHR3-207ENST00000470188 SLC1A4P43007 532 aa22.35■■□□□ 1.17
CDHR3-207ENST00000470188 KLK7P49862 253 aa22.35■■□□□ 1.17
CDHR3-207ENST00000470188 MEA1Q16626 185 aa22.35■■□□□ 1.17
CDHR3-207ENST00000470188 FKBP15Q5T1M5 1219 aa22.35■■□□□ 1.17
CDHR3-207ENST00000470188 STRIP1Q5VSL9 837 aa22.35■■□□□ 1.17
CDHR3-207ENST00000470188 DCAF4Q8WV16 495 aa22.35■■□□□ 1.17
CDHR3-207ENST00000470188 DDX12PQ92771 950 aa22.35■■□□□ 1.17
CDHR3-207ENST00000470188 NAP1L4Q99733 375 aaKnown RBP22.35■■□□□ 1.17
CDHR3-207ENST00000470188 NAPGQ99747 312 aaPredicted RBP22.35■■□□□ 1.17
CDHR3-207ENST00000470188 GLT8D2Q9H1C3 349 aa22.35■■□□□ 1.17
CDHR3-207ENST00000470188 AGPAT5Q9NUQ2 364 aa22.35■■□□□ 1.17
CDHR3-207ENST00000470188 PI4KBQ9UBF8 816 aa22.35■■□□□ 1.17
CDHR3-207ENST00000470188 ATF5Q9Y2D1 282 aaPredicted RBP22.35■■□□□ 1.17
CDHR3-207ENST00000470188 RRP15Q9Y3B9 282 aaKnown RBP22.35■■□□□ 1.17
CDHR3-207ENST00000470188 DDTLA6NHG4 134 aaPredicted RBP22.34■■□□□ 1.17
CDHR3-207ENST00000470188 PLSCR1O15162 318 aa22.34■■□□□ 1.17
CDHR3-207ENST00000470188 TNNT3P45378 269 aaPredicted RBP22.34■■□□□ 1.17
CDHR3-207ENST00000470188 QRICH1Q2TAL8 776 aa22.34■■□□□ 1.17
CDHR3-207ENST00000470188 GUF1Q8N442 669 aaKnown RBP22.34■■□□□ 1.17
CDHR3-207ENST00000470188 MKL1Q969V6 931 aa22.34■■□□□ 1.17
CDHR3-207ENST00000470188 ZSWIM4Q9H7M6 989 aa22.34■■□□□ 1.17
CDHR3-207ENST00000470188 KANSL2Q9H9L4 492 aa22.34■■□□□ 1.17
CDHR3-207ENST00000470188 NYAP2Q9P242 653 aa22.34■■□□□ 1.17
CDHR3-207ENST00000470188 FAM198AQ9UFP1 575 aa22.34■■□□□ 1.17
CDHR3-207ENST00000470188 PUF60Q9UHX1 559 aaKnown RBP22.34■■□□□ 1.17
CDHR3-207ENST00000470188 RASSF10A6NK89 507 aa22.33■■□□□ 1.17
CDHR3-207ENST00000470188 APBA3O96018 575 aa22.33■■□□□ 1.17
CDHR3-207ENST00000470188 FKBP1AP62942 108 aaKnown RBP22.33■■□□□ 1.17
CDHR3-207ENST00000470188 WHAMMP3Q1A5X7 153 aa22.33■■□□□ 1.17
CDHR3-207ENST00000470188 SHROOM1Q2M3G4 852 aaPredicted RBP22.33■■□□□ 1.17
CDHR3-207ENST00000470188 DACT2Q5SW24 774 aa22.33■■□□□ 1.17
CDHR3-207ENST00000470188 SLFN13Q68D06 897 aa22.33■■□□□ 1.17
CDHR3-207ENST00000470188 MSL1Q68DK7 614 aa22.33■■□□□ 1.17
CDHR3-207ENST00000470188 C2CD5Q86YS7 1000 aa22.33■■□□□ 1.17
CDHR3-207ENST00000470188 ERGIC2Q96RQ1 377 aa22.33■■□□□ 1.17
CDHR3-207ENST00000470188 PNKPQ96T60 521 aa22.33■■□□□ 1.17
CDHR3-207ENST00000470188 IDI2Q9BXS1 227 aa22.33■■□□□ 1.17
CDHR3-207ENST00000470188 ACBD3Q9H3P7 528 aa22.33■■□□□ 1.17
CDHR3-207ENST00000470188 ZNHIT6Q9NWK9 470 aaKnown RBP22.33■■□□□ 1.17
CDHR3-207ENST00000470188 PCDHA12Q9UN75 941 aa22.33■■□□□ 1.17
CDHR3-207ENST00000470188 ZBED6P86452 979 aa22.33■■□□□ 1.16
CDHR3-207ENST00000470188 FAM71BQ8TC56 605 aa22.33■■□□□ 1.16
CDHR3-207ENST00000470188 GJA10Q969M2 543 aa22.33■■□□□ 1.16
CDHR3-207ENST00000470188 PCDHA1Q9Y5I3 950 aa22.33■■□□□ 1.16
CDHR3-207ENST00000470188 USP17L15C9J2P7 530 aa22.32■■□□□ 1.16
CDHR3-207ENST00000470188 USP17L13C9JLJ4 530 aa22.32■■□□□ 1.16
CDHR3-207ENST00000470188 USP17L11C9JVI0 530 aa22.32■■□□□ 1.16
CDHR3-207ENST00000470188 USP17L18D6R9N7 530 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms