RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 DDX11Q96FC9 970 aa8.59□□□□□ -1.03
COL11A1-208ENST00000470170 SPATA25Q9BR10 227 aa8.59□□□□□ -1.03
COL11A1-208ENST00000470170 R3HCC1Q9Y3T6 440 aaKnown RBP8.59□□□□□ -1.03
COL11A1-208ENST00000470170 CPP00450 1065 aa8.58□□□□□ -1.04
COL11A1-208ENST00000470170 C8BP07358 591 aa8.58□□□□□ -1.04
COL11A1-208ENST00000470170 LCP1P13796 627 aa8.58□□□□□ -1.04
COL11A1-208ENST00000470170 GRIA2P42262 883 aa8.58□□□□□ -1.04
COL11A1-208ENST00000470170 KCNC1P48547 511 aa8.58□□□□□ -1.04
COL11A1-208ENST00000470170 RBM10P98175 930 aaKnown RBP8.58□□□□□ -1.04
COL11A1-208ENST00000470170 ACBD5Q5T8D3 534 aaPredicted RBP8.58□□□□□ -1.04
COL11A1-208ENST00000470170 ANKS3Q6ZW76 656 aa8.58□□□□□ -1.04
COL11A1-208ENST00000470170 RCBTB1Q8NDN9 531 aa8.58□□□□□ -1.04
COL11A1-208ENST00000470170 TRMT2BQ96GJ1 504 aaKnown RBP8.58□□□□□ -1.04
COL11A1-208ENST00000470170 SYT3Q9BQG1 590 aa8.58□□□□□ -1.04
COL11A1-208ENST00000470170 SH3D21A4FU49 640 aa8.57□□□□□ -1.04
COL11A1-208ENST00000470170 MYO1BO43795 1136 aa8.57□□□□□ -1.04
COL11A1-208ENST00000470170 ETV3LQ6ZN32 361 aa8.57□□□□□ -1.04
COL11A1-208ENST00000470170 Q8N1Y9 231 aa8.57□□□□□ -1.04
COL11A1-208ENST00000470170 SEC14L1Q92503 715 aa8.57□□□□□ -1.04
COL11A1-208ENST00000470170 C1orf159Q96HA4 380 aa8.57□□□□□ -1.04
COL11A1-208ENST00000470170 CCDC140Q96MF4 163 aa8.57□□□□□ -1.04
COL11A1-208ENST00000470170 PALD1Q9ULE6 856 aa8.57□□□□□ -1.04
COL11A1-208ENST00000470170 CAPNS1P04632 268 aa8.56□□□□□ -1.04
COL11A1-208ENST00000470170 CYP2C8P10632 490 aa8.56□□□□□ -1.04
COL11A1-208ENST00000470170 PPP2R2AP63151 447 aa8.56□□□□□ -1.04
COL11A1-208ENST00000470170 SMAD4Q13485 552 aaKnown RBP8.56□□□□□ -1.04
COL11A1-208ENST00000470170 DDR2Q16832 855 aa8.56□□□□□ -1.04
COL11A1-208ENST00000470170 MROH9Q5TGP6 573 aa8.56□□□□□ -1.04
COL11A1-208ENST00000470170 MILR1Q7Z6M3 343 aa8.56□□□□□ -1.04
COL11A1-208ENST00000470170 RIOX2Q8IUF8 465 aa8.56□□□□□ -1.04
COL11A1-208ENST00000470170 FAM26EQ8N5C1 309 aa8.56□□□□□ -1.04
COL11A1-208ENST00000470170 SLC43A3Q8NBI5 491 aa8.56□□□□□ -1.04
COL11A1-208ENST00000470170 ZBTB8AQ96BR9 441 aa8.56□□□□□ -1.04
COL11A1-208ENST00000470170 TMEM169Q96HH4 297 aa8.56□□□□□ -1.04
COL11A1-208ENST00000470170 GMLQ99445 158 aa8.56□□□□□ -1.04
COL11A1-208ENST00000470170 EPN3Q9H201 632 aa8.56□□□□□ -1.04
COL11A1-208ENST00000470170 PCDHA2Q9Y5H9 948 aa8.56□□□□□ -1.04
COL11A1-208ENST00000470170 X6R8D5 127 aa8.56□□□□□ -1.04
COL11A1-208ENST00000470170 A0A1W2PQU0 124 aa8.55□□□□□ -1.04
COL11A1-208ENST00000470170 SYN1P17600 705 aa8.55□□□□□ -1.04
COL11A1-208ENST00000470170 LTBRP36941 435 aa8.55□□□□□ -1.04
COL11A1-208ENST00000470170 SLC6A11P48066 632 aa8.55□□□□□ -1.04
COL11A1-208ENST00000470170 GTF2A2P52657 109 aa8.55□□□□□ -1.04
COL11A1-208ENST00000470170 TESK1Q15569 626 aa8.55□□□□□ -1.04
COL11A1-208ENST00000470170 MIB1Q86YT6 1006 aa8.55□□□□□ -1.04
COL11A1-208ENST00000470170 GORASP1Q9BQQ3 440 aa8.55□□□□□ -1.04
COL11A1-208ENST00000470170 IGSF5Q9NSI5 407 aa8.55□□□□□ -1.04
COL11A1-208ENST00000470170 SPATA6Q9NWH7 488 aaPredicted RBP8.55□□□□□ -1.04
COL11A1-208ENST00000470170 AGRPO00253 132 aa8.54□□□□□ -1.04
COL11A1-208ENST00000470170 KLF4O43474 513 aa8.54□□□□□ -1.04
COL11A1-208ENST00000470170 SLC35F1Q5T1Q4 408 aa8.54□□□□□ -1.04
COL11A1-208ENST00000470170 NT5DC1Q5TFE4 455 aa8.54□□□□□ -1.04
COL11A1-208ENST00000470170 FRMD5Q7Z6J6 570 aa8.54□□□□□ -1.04
COL11A1-208ENST00000470170 CARFQ8N187 725 aa8.54□□□□□ -1.04
COL11A1-208ENST00000470170 CXorf38Q8TB03 319 aa8.54□□□□□ -1.04
COL11A1-208ENST00000470170 CHAMP1Q96JM3 812 aa8.54□□□□□ -1.04
COL11A1-208ENST00000470170 CD300LDQ6UXZ3 194 aa8.53□□□□□ -1.04
COL11A1-208ENST00000470170 TEPSINQ96N21 525 aa8.53□□□□□ -1.04
COL11A1-208ENST00000470170 IER2Q9BTL4 223 aa8.53□□□□□ -1.04
COL11A1-208ENST00000470170 COA3Q9Y2R0 106 aaPredicted RBP8.53□□□□□ -1.04
COL11A1-208ENST00000470170 STAT5AP42229 794 aa8.52□□□□□ -1.05
COL11A1-208ENST00000470170 LSAMPQ13449 338 aa8.52□□□□□ -1.05
COL11A1-208ENST00000470170 STK32CQ86UX6 486 aa8.52□□□□□ -1.05
COL11A1-208ENST00000470170 LINC00482Q8N8I6 264 aa8.52□□□□□ -1.05
COL11A1-208ENST00000470170 USP40Q9NVE5 1235 aa8.52□□□□□ -1.05
COL11A1-208ENST00000470170 CLDND1Q9NY35 253 aa8.52□□□□□ -1.05
COL11A1-208ENST00000470170 NTMQ9P121 344 aa8.52□□□□□ -1.05
COL11A1-208ENST00000470170 MAP4K2Q12851 820 aa8.51□□□□□ -1.05
COL11A1-208ENST00000470170 FAM126BQ8IXS8 530 aa8.51□□□□□ -1.05
COL11A1-208ENST00000470170 KCTD13Q8WZ19 329 aa8.51□□□□□ -1.05
COL11A1-208ENST00000470170 C11orf84Q9BUA3 381 aaPredicted RBP8.51□□□□□ -1.05
COL11A1-208ENST00000470170 H7BY64 318 aa8.5□□□□□ -1.05
COL11A1-208ENST00000470170 PRICKLE3O43900 615 aaPredicted RBP8.5□□□□□ -1.05
COL11A1-208ENST00000470170 SMARCA5O60264 1052 aaPredicted RBP8.5□□□□□ -1.05
COL11A1-208ENST00000470170 DLX3O60479 287 aa8.5□□□□□ -1.05
COL11A1-208ENST00000470170 SARSP49591 514 aaKnown RBP8.5□□□□□ -1.05
COL11A1-208ENST00000470170 SKOR2Q2VWA4 1001 aaPredicted RBP8.5□□□□□ -1.05
COL11A1-208ENST00000470170 ZC3H18Q86VM9 953 aaKnown RBP8.5□□□□□ -1.05
COL11A1-208ENST00000470170 ZNF652Q9Y2D9 606 aa8.5□□□□□ -1.05
COL11A1-208ENST00000470170 NPFFR2Q9Y5X5 522 aa8.5□□□□□ -1.05
COL11A1-208ENST00000470170 RTP5Q14D33 572 aa8.49□□□□□ -1.05
COL11A1-208ENST00000470170 TTLL7Q6ZT98 887 aa8.49□□□□□ -1.05
COL11A1-208ENST00000470170 YIPF4Q9BSR8 244 aa8.49□□□□□ -1.05
COL11A1-208ENST00000470170 HGSO14964 777 aaPredicted RBP8.48□□□□□ -1.05
COL11A1-208ENST00000470170 NOBOXO60393 691 aa8.48□□□□□ -1.05
COL11A1-208ENST00000470170 MSCO60682 206 aa8.48□□□□□ -1.05
COL11A1-208ENST00000470170 THBS2P35442 1172 aa8.48□□□□□ -1.05
COL11A1-208ENST00000470170 ITGA1P56199 1179 aa8.48□□□□□ -1.05
COL11A1-208ENST00000470170 RAB33AQ14088 237 aa8.48□□□□□ -1.05
COL11A1-208ENST00000470170 CR1LQ2VPA4 569 aa8.48□□□□□ -1.05
COL11A1-208ENST00000470170 STEAP3Q658P3 488 aa8.48□□□□□ -1.05
COL11A1-208ENST00000470170 USP53Q70EK8 1073 aa8.48□□□□□ -1.05
COL11A1-208ENST00000470170 FERMT3Q86UX7 667 aa8.48□□□□□ -1.05
COL11A1-208ENST00000470170 ZNF761Q86XN6 746 aaPredicted RBP8.48□□□□□ -1.05
COL11A1-208ENST00000470170 KYQ8NBH2 561 aa8.48□□□□□ -1.05
COL11A1-208ENST00000470170 ARRDC4Q8NCT1 418 aa8.48□□□□□ -1.05
COL11A1-208ENST00000470170 BDH2Q9BUT1 245 aa8.48□□□□□ -1.05
COL11A1-208ENST00000470170 E9PSI1 815 aa8.47□□□□□ -1.05
COL11A1-208ENST00000470170 CELA3BP08861 270 aa8.47□□□□□ -1.05
COL11A1-208ENST00000470170 GJA9P57773 515 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms