RNA–Protein interactions for RNA: ENST00000469356.3

SREBF1-208, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-208ENST00000469356 TSHZ2Q9NRE2 1034 aa26.15■■□□□ 1.78
SREBF1-208ENST00000469356 RBM19Q9Y4C8 960 aaKnown RBP26.15■■□□□ 1.78
SREBF1-208ENST00000469356 SYT1P21579 422 aa26.14■■□□□ 1.78
SREBF1-208ENST00000469356 NR5A1Q13285 461 aa26.14■■□□□ 1.78
SREBF1-208ENST00000469356 PIK3AP1Q6ZUJ8 805 aa26.14■■□□□ 1.78
SREBF1-208ENST00000469356 OXER1Q8TDS5 423 aa26.14■■□□□ 1.78
SREBF1-208ENST00000469356 TBCKQ8TEA7 893 aa26.14■■□□□ 1.78
SREBF1-208ENST00000469356 FAM184BQ9ULE4 1060 aa26.14■■□□□ 1.78
SREBF1-208ENST00000469356 MAFGO15525 162 aa26.14■■□□□ 1.77
SREBF1-208ENST00000469356 MSCO60682 206 aa26.14■■□□□ 1.77
SREBF1-208ENST00000469356 CNGA1P29973 690 aa26.14■■□□□ 1.77
SREBF1-208ENST00000469356 MAP3K21Q5TCX8 1036 aa26.14■■□□□ 1.77
SREBF1-208ENST00000469356 IQSEC1Q6DN90 963 aa26.14■■□□□ 1.77
SREBF1-208ENST00000469356 EEPD1Q7L9B9 569 aa26.14■■□□□ 1.77
SREBF1-208ENST00000469356 SCFD2Q8WU76 684 aa26.14■■□□□ 1.77
SREBF1-208ENST00000469356 ARMC5Q96C12 935 aa26.14■■□□□ 1.77
SREBF1-208ENST00000469356 NOL7Q9UMY1 257 aaKnown RBP26.14■■□□□ 1.77
SREBF1-208ENST00000469356 MYH7BA7E2Y1 1941 aa26.13■■□□□ 1.77
SREBF1-208ENST00000469356 STX6O43752 255 aa26.13■■□□□ 1.77
SREBF1-208ENST00000469356 CYBAP13498 195 aa26.13■■□□□ 1.77
SREBF1-208ENST00000469356 U2AF2P26368 475 aaKnown RBP eCLIP26.13■■□□□ 1.77
SREBF1-208ENST00000469356 TTLL4Q14679 1199 aa26.13■■□□□ 1.77
SREBF1-208ENST00000469356 NEK8Q86SG6 692 aa26.13■■□□□ 1.77
SREBF1-208ENST00000469356 NOSTRINQ8IVI9 506 aa26.13■■□□□ 1.77
SREBF1-208ENST00000469356 KIAA1217Q5T5P2 1943 aa26.12■■□□□ 1.77
SREBF1-208ENST00000469356 TGFB3P10600 412 aa26.12■■□□□ 1.77
SREBF1-208ENST00000469356 AKR1A1P14550 325 aa26.12■■□□□ 1.77
SREBF1-208ENST00000469356 INF2Q27J81 1249 aa26.12■■□□□ 1.77
SREBF1-208ENST00000469356 PRAMEF19Q5SWL8 479 aa26.12■■□□□ 1.77
SREBF1-208ENST00000469356 MOXD1Q6UVY6 613 aa26.12■■□□□ 1.77
SREBF1-208ENST00000469356 SEPT14Q6ZU15 432 aa26.12■■□□□ 1.77
SREBF1-208ENST00000469356 FBXO16Q8IX29 292 aaPredicted RBP26.12■■□□□ 1.77
SREBF1-208ENST00000469356 IL31RAQ8NI17 732 aa26.12■■□□□ 1.77
SREBF1-208ENST00000469356 GPRASP2Q96D09 838 aa26.12■■□□□ 1.77
SREBF1-208ENST00000469356 ADAMTS3O15072 1205 aa26.11■■□□□ 1.77
SREBF1-208ENST00000469356 SEPT4O43236 478 aa26.11■■□□□ 1.77
SREBF1-208ENST00000469356 ZNF865P0CJ78 1059 aaPredicted RBP26.11■■□□□ 1.77
SREBF1-208ENST00000469356 GCFC2P16383 781 aaKnown RBP26.11■■□□□ 1.77
SREBF1-208ENST00000469356 MRPS9P82933 396 aaKnown RBP26.11■■□□□ 1.77
SREBF1-208ENST00000469356 TRIM32Q13049 653 aa26.11■■□□□ 1.77
SREBF1-208ENST00000469356 CEP55Q53EZ4 464 aa26.11■■□□□ 1.77
SREBF1-208ENST00000469356 NIPA1Q7RTP0 329 aa26.11■■□□□ 1.77
SREBF1-208ENST00000469356 BRAPQ7Z569 592 aa26.11■■□□□ 1.77
SREBF1-208ENST00000469356 TNFRSF25Q93038 417 aa26.11■■□□□ 1.77
SREBF1-208ENST00000469356 INPP4AQ96PE3 977 aaPredicted RBP26.11■■□□□ 1.77
SREBF1-208ENST00000469356 MXRA8Q9BRK3 442 aa26.11■■□□□ 1.77
SREBF1-208ENST00000469356 RTEL1Q9NZ71 1219 aa26.11■■□□□ 1.77
SREBF1-208ENST00000469356 RBM47A0AV96 593 aaKnown RBP26.1■■□□□ 1.77
SREBF1-208ENST00000469356 NKRFO15226 690 aaKnown RBP eCLIP26.1■■□□□ 1.77
SREBF1-208ENST00000469356 FIBPO43427 364 aa26.1■■□□□ 1.77
SREBF1-208ENST00000469356 CIITAP33076 1130 aa26.1■■□□□ 1.77
SREBF1-208ENST00000469356 TRAPPC10P48553 1259 aa26.1■■□□□ 1.77
SREBF1-208ENST00000469356 SETQ01105 290 aaPredicted RBP26.1■■□□□ 1.77
SREBF1-208ENST00000469356 CRYGNQ8WXF5 182 aa26.1■■□□□ 1.77
SREBF1-208ENST00000469356 ZNF333Q96JL9 665 aa26.1■■□□□ 1.77
SREBF1-208ENST00000469356 KATNBL1Q9H079 304 aa26.1■■□□□ 1.77
SREBF1-208ENST00000469356 ZSCAN16Q9H4T2 348 aaPredicted RBP26.1■■□□□ 1.77
SREBF1-208ENST00000469356 JADE2Q9NQC1 790 aa26.1■■□□□ 1.77
SREBF1-208ENST00000469356 UBIAD1Q9Y5Z9 338 aa26.1■■□□□ 1.77
SREBF1-208ENST00000469356 MRVI1Q9Y6F6 885 aa26.1■■□□□ 1.77
SREBF1-208ENST00000469356 CAPN2P17655 700 aa26.09■■□□□ 1.77
SREBF1-208ENST00000469356 ICAM3P32942 547 aa26.09■■□□□ 1.77
SREBF1-208ENST00000469356 LETM2Q2VYF4 491 aa26.09■■□□□ 1.77
SREBF1-208ENST00000469356 CCDC144BQ3MJ40 725 aa26.09■■□□□ 1.77
SREBF1-208ENST00000469356 TAPT1Q6NXT6 567 aa26.09■■□□□ 1.77
SREBF1-208ENST00000469356 GIMAP8Q8ND71 665 aaPredicted RBP26.09■■□□□ 1.77
SREBF1-208ENST00000469356 WDR11Q9BZH6 1224 aa26.09■■□□□ 1.77
SREBF1-208ENST00000469356 TNFAIP2Q03169 654 aa26.08■■□□□ 1.77
SREBF1-208ENST00000469356 MTMR1Q13613 665 aa26.08■■□□□ 1.77
SREBF1-208ENST00000469356 TMEM106CQ9BVX2 250 aa26.08■■□□□ 1.77
SREBF1-208ENST00000469356 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.08■■□□□ 1.773e-6■□□□□ 10.4
SREBF1-208ENST00000469356 RNF208Q9H0X6 261 aa26.08■■□□□ 1.77
SREBF1-208ENST00000469356 SPC25Q9HBM1 224 aa26.08■■□□□ 1.77
SREBF1-208ENST00000469356 LRRC37A2A6NM11 1700 aa26.07■■□□□ 1.76
SREBF1-208ENST00000469356 TXNP10599 105 aaKnown RBP26.07■■□□□ 1.76
SREBF1-208ENST00000469356 RARBP10826 455 aa26.07■■□□□ 1.76
SREBF1-208ENST00000469356 CCL5P13501 91 aa26.07■■□□□ 1.76
SREBF1-208ENST00000469356 CCND3P30281 292 aaPredicted RBP26.07■■□□□ 1.76
SREBF1-208ENST00000469356 ORC2Q13416 577 aaPredicted RBP26.07■■□□□ 1.76
SREBF1-208ENST00000469356 PPP4R3AQ6IN85 833 aa26.07■■□□□ 1.76
SREBF1-208ENST00000469356 PLA2G4DQ86XP0 818 aa26.07■■□□□ 1.76
SREBF1-208ENST00000469356 MTMR6Q9Y217 621 aa26.07■■□□□ 1.76
SREBF1-208ENST00000469356 DDX49Q9Y6V7 483 aaKnown RBP26.07■■□□□ 1.76
SREBF1-208ENST00000469356 CYP3A7-CYP3A51PA0A087WV96 503 aa26.06■■□□□ 1.76
SREBF1-208ENST00000469356 MEIS1O00470 390 aa26.06■■□□□ 1.76
SREBF1-208ENST00000469356 CCNT1O60563 726 aaKnown RBP26.06■■□□□ 1.76
SREBF1-208ENST00000469356 CYP3A7P24462 503 aa26.06■■□□□ 1.76
SREBF1-208ENST00000469356 ADCYAP1R1P41586 468 aa26.06■■□□□ 1.76
SREBF1-208ENST00000469356 NEDD9Q14511 834 aa26.06■■□□□ 1.76
SREBF1-208ENST00000469356 RILPL1Q5EBL4 403 aa26.06■■□□□ 1.76
SREBF1-208ENST00000469356 TRPV1Q8NER1 839 aa26.06■■□□□ 1.76
SREBF1-208ENST00000469356 DDX20Q9UHI6 824 aaKnown RBP26.06■■□□□ 1.76
SREBF1-208ENST00000469356 Q9Y3F1 56 aa26.06■■□□□ 1.76
SREBF1-208ENST00000469356 SPATA31C2B4DYI2 1134 aa26.05■■□□□ 1.76
SREBF1-208ENST00000469356 DUSP11O75319 330 aaKnown RBP26.05■■□□□ 1.76
SREBF1-208ENST00000469356 ITGB5P18084 799 aa26.05■■□□□ 1.76
SREBF1-208ENST00000469356 Q4G0T1 1027 aa26.05■■□□□ 1.76
SREBF1-208ENST00000469356 DUSP28Q4G0W2 176 aa26.05■■□□□ 1.76
SREBF1-208ENST00000469356 PRR16Q569H4 304 aa26.05■■□□□ 1.76
SREBF1-208ENST00000469356 COL13A1Q5TAT6 717 aaPredicted RBP26.05■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms