RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 DAGLAQ9Y4D2 1042 aa10.97□□□□□ -0.65
NUP50-214ENST00000469163 MYBPC3Q14896 1274 aa10.97□□□□□ -0.65
NUP50-214ENST00000469163 NANOGNBQ7Z5D8 188 aa10.97□□□□□ -0.65
NUP50-214ENST00000469163 STAMBPL1Q96FJ0 436 aa10.97□□□□□ -0.65
NUP50-214ENST00000469163 VCPKMTQ9H867 229 aa10.97□□□□□ -0.65
NUP50-214ENST00000469163 SH2B1Q9NRF2 756 aaPredicted RBP10.97□□□□□ -0.65
NUP50-214ENST00000469163 SCN11AQ9UI33 1791 aa10.97□□□□□ -0.65
NUP50-214ENST00000469163 CEP104O60308 925 aa10.96□□□□□ -0.65
NUP50-214ENST00000469163 RASSF9O75901 435 aa10.96□□□□□ -0.65
NUP50-214ENST00000469163 CDC27P30260 824 aa10.96□□□□□ -0.65
NUP50-214ENST00000469163 GUCY1A2P33402 732 aa10.96□□□□□ -0.65
NUP50-214ENST00000469163 UBXN2AP68543 259 aa10.96□□□□□ -0.65
NUP50-214ENST00000469163 KRT85P78386 507 aa10.96□□□□□ -0.65
NUP50-214ENST00000469163 SP4Q02446 784 aa10.96□□□□□ -0.65
NUP50-214ENST00000469163 NR5A1Q13285 461 aa10.96□□□□□ -0.65
NUP50-214ENST00000469163 WHAMMP3Q1A5X7 153 aa10.96□□□□□ -0.65
NUP50-214ENST00000469163 RSRC2Q7L4I2 434 aaKnown RBP10.96□□□□□ -0.65
NUP50-214ENST00000469163 ZNF654Q8IZM8 581 aa10.96□□□□□ -0.65
NUP50-214ENST00000469163 CABP5Q9NP86 173 aa10.96□□□□□ -0.65
NUP50-214ENST00000469163 TMEM98Q9Y2Y6 226 aa10.96□□□□□ -0.65
NUP50-214ENST00000469163 PARP4Q9UKK3 1724 aaKnown RBP10.96□□□□□ -0.65
NUP50-214ENST00000469163 LRRIQ3A6PVS8 624 aaPredicted RBP10.96□□□□□ -0.65
NUP50-214ENST00000469163 PDCP20941 246 aa10.96□□□□□ -0.65
NUP50-214ENST00000469163 CDC25AP30304 524 aa10.96□□□□□ -0.65
NUP50-214ENST00000469163 MXRA7P84157 204 aa10.96□□□□□ -0.65
NUP50-214ENST00000469163 SLF2Q8IX21 1173 aa10.96□□□□□ -0.65
NUP50-214ENST00000469163 ATP11CQ8NB49 1132 aa10.96□□□□□ -0.65
NUP50-214ENST00000469163 GALNT8Q9NY28 637 aa10.96□□□□□ -0.65
NUP50-214ENST00000469163 HDAC9Q9UKV0 1011 aa10.96□□□□□ -0.65
NUP50-214ENST00000469163 BZW2Q9Y6E2 419 aaKnown RBP10.96□□□□□ -0.65
NUP50-214ENST00000469163 FAM228AQ86W67 206 aa10.96□□□□□ -0.66
NUP50-214ENST00000469163 FCHSD1Q86WN1 690 aa10.96□□□□□ -0.66
NUP50-214ENST00000469163 ZNF384Q8TF68 577 aa10.96□□□□□ -0.66
NUP50-214ENST00000469163 NOC3LQ8WTT2 800 aaKnown RBP10.96□□□□□ -0.66
NUP50-214ENST00000469163 PNKPQ96T60 521 aa10.96□□□□□ -0.66
NUP50-214ENST00000469163 HAUS2Q9NVX0 235 aa10.96□□□□□ -0.66
NUP50-214ENST00000469163 CORO1CQ9ULV4 474 aaPredicted RBP10.96□□□□□ -0.66
NUP50-214ENST00000469163 GLI3P10071 1580 aa10.95□□□□□ -0.66
NUP50-214ENST00000469163 BTBD18B2RXH4 712 aa10.95□□□□□ -0.66
NUP50-214ENST00000469163 LSM1O15116 133 aaKnown RBP10.95□□□□□ -0.66
NUP50-214ENST00000469163 KIF5CO60282 957 aa10.95□□□□□ -0.66
NUP50-214ENST00000469163 F13A1P00488 732 aa10.95□□□□□ -0.66
NUP50-214ENST00000469163 VIL1P09327 827 aaKnown RBP10.95□□□□□ -0.66
NUP50-214ENST00000469163 CLCN2P51788 898 aa10.95□□□□□ -0.66
NUP50-214ENST00000469163 CUL4BQ13620 913 aa10.95□□□□□ -0.66
NUP50-214ENST00000469163 PPP1R15BQ5SWA1 713 aa10.95□□□□□ -0.66
NUP50-214ENST00000469163 APOA5Q6Q788 366 aa10.95□□□□□ -0.66
NUP50-214ENST00000469163 CCDC65Q8IXS2 484 aa10.95□□□□□ -0.66
NUP50-214ENST00000469163 PNMA1Q8ND90 353 aa10.95□□□□□ -0.66
NUP50-214ENST00000469163 SMARCC2Q8TAQ2 1214 aa10.95□□□□□ -0.66
NUP50-214ENST00000469163 CCDC12Q8WUD4 166 aaPredicted RBP10.95□□□□□ -0.66
NUP50-214ENST00000469163 DHX58Q96C10 678 aa10.95□□□□□ -0.66
NUP50-214ENST00000469163 ZHX3Q9H4I2 956 aa10.95□□□□□ -0.66
NUP50-214ENST00000469163 SPON1Q9HCB6 807 aa10.95□□□□□ -0.66
NUP50-214ENST00000469163 SIPA1L3O60292 1781 aaPredicted RBP10.95□□□□□ -0.66
NUP50-214ENST00000469163 ASTN2O75129 1339 aaPredicted RBP10.95□□□□□ -0.66
NUP50-214ENST00000469163 ADAMTS7Q9UKP4 1686 aa10.95□□□□□ -0.66
NUP50-214ENST00000469163 PFDN1O60925 122 aa10.95□□□□□ -0.66
NUP50-214ENST00000469163 GNAT2P19087 354 aa10.95□□□□□ -0.66
NUP50-214ENST00000469163 FUT4P22083 530 aa10.95□□□□□ -0.66
NUP50-214ENST00000469163 ANTXR2P58335 489 aa10.95□□□□□ -0.66
NUP50-214ENST00000469163 CCDC174Q6PII3 467 aa10.95□□□□□ -0.66
NUP50-214ENST00000469163 NEK9Q8TD19 979 aa10.95□□□□□ -0.66
NUP50-214ENST00000469163 INTS4Q96HW7 963 aaKnown RBP10.95□□□□□ -0.66
NUP50-214ENST00000469163 ZSCAN10Q96SZ4 725 aaPredicted RBP10.95□□□□□ -0.66
NUP50-214ENST00000469163 A0A1B0GVL5 298 aa10.95□□□□□ -0.66
NUP50-214ENST00000469163 GOLGA6L9A6NEM1 432 aa10.95□□□□□ -0.66
NUP50-214ENST00000469163 POTEB2H3BUK9 544 aa10.95□□□□□ -0.66
NUP50-214ENST00000469163 DDNO94850 711 aaPredicted RBP10.95□□□□□ -0.66
NUP50-214ENST00000469163 EGFRP00533 1210 aa10.95□□□□□ -0.66
NUP50-214ENST00000469163 DGKZQ13574 1117 aa10.95□□□□□ -0.66
NUP50-214ENST00000469163 ZNF174Q15697 407 aa10.95□□□□□ -0.66
NUP50-214ENST00000469163 MTHFD1LQ6UB35 978 aa10.95□□□□□ -0.66
NUP50-214ENST00000469163 CCDC121Q6ZUS5 278 aa10.95□□□□□ -0.66
NUP50-214ENST00000469163 STAG2Q8N3U4 1231 aa10.95□□□□□ -0.66
NUP50-214ENST00000469163 CCDC150Q8NCX0 1101 aa10.95□□□□□ -0.66
NUP50-214ENST00000469163 UBE2OQ9C0C9 1292 aaKnown RBP10.95□□□□□ -0.66
NUP50-214ENST00000469163 COA1Q9GZY4 146 aa10.95□□□□□ -0.66
NUP50-214ENST00000469163 ANO10Q9NW15 660 aa10.95□□□□□ -0.66
NUP50-214ENST00000469163 F8VZ95 297 aa10.94□□□□□ -0.66
NUP50-214ENST00000469163 EIF3HO15372 352 aaKnown RBP eCLIP10.94□□□□□ -0.66
NUP50-214ENST00000469163 MAP7D1Q3KQU3 841 aa10.94□□□□□ -0.66
NUP50-214ENST00000469163 PUS10Q3MIT2 529 aaKnown RBP10.94□□□□□ -0.66
NUP50-214ENST00000469163 SEPT14Q6ZU15 432 aa10.94□□□□□ -0.66
NUP50-214ENST00000469163 HNRNPLLQ8WVV9 542 aaKnown RBP10.94□□□□□ -0.66
NUP50-214ENST00000469163 AGAP3Q96P47 875 aa10.94□□□□□ -0.66
NUP50-214ENST00000469163 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.94□□□□□ -0.66
NUP50-214ENST00000469163 DDX4Q9NQI0 724 aaKnown RBP10.94□□□□□ -0.66
NUP50-214ENST00000469163 SWAP70Q9UH65 585 aa10.94□□□□□ -0.66
NUP50-214ENST00000469163 MCM7P33993 719 aa10.94□□□□□ -0.66
NUP50-214ENST00000469163 VSNL1P62760 191 aa10.94□□□□□ -0.66
NUP50-214ENST00000469163 SOGA3Q5TF21 947 aa10.94□□□□□ -0.66
NUP50-214ENST00000469163 FUKQ8N0W3 1084 aa10.94□□□□□ -0.66
NUP50-214ENST00000469163 TEKT4Q8WW24 435 aa10.94□□□□□ -0.66
NUP50-214ENST00000469163 KIFC2Q96AC6 838 aa10.94□□□□□ -0.66
NUP50-214ENST00000469163 IL17RAQ96F46 866 aa10.94□□□□□ -0.66
NUP50-214ENST00000469163 RMDN2Q96LZ7 410 aa10.94□□□□□ -0.66
NUP50-214ENST00000469163 CRAMP1Q96RY5 1269 aa10.94□□□□□ -0.66
NUP50-214ENST00000469163 BRD8Q9H0E9 1235 aa10.94□□□□□ -0.66
NUP50-214ENST00000469163 SEC63Q9UGP8 760 aaKnown RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms