RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 GRB14Q14449 540 aa9.24□□□□□ -0.93
HDAC6-216ENST00000468949 INF2Q27J81 1249 aa9.24□□□□□ -0.93
HDAC6-216ENST00000468949 LETM2Q2VYF4 491 aa9.24□□□□□ -0.93
HDAC6-216ENST00000468949 POTEEQ6S8J3 1075 aa9.24□□□□□ -0.93
HDAC6-216ENST00000468949 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.24□□□□□ -0.93
HDAC6-216ENST00000468949 RAET1EQ8TD07 263 aa9.24□□□□□ -0.93
HDAC6-216ENST00000468949 TBCKQ8TEA7 893 aa9.24□□□□□ -0.93
HDAC6-216ENST00000468949 SHISA4Q96DD7 197 aa9.24□□□□□ -0.93
HDAC6-216ENST00000468949 APBA2Q99767 749 aa9.24□□□□□ -0.93
HDAC6-216ENST00000468949 PXMP2Q9NR77 195 aa9.24□□□□□ -0.93
HDAC6-216ENST00000468949 ASB14A6NK59 587 aa9.23□□□□□ -0.93
HDAC6-216ENST00000468949 CCNT1O60563 726 aaKnown RBP9.23□□□□□ -0.93
HDAC6-216ENST00000468949 BMP15O95972 392 aa9.23□□□□□ -0.93
HDAC6-216ENST00000468949 MYCLP12524 364 aaPredicted RBP9.23□□□□□ -0.93
HDAC6-216ENST00000468949 GCFC2P16383 781 aaKnown RBP9.23□□□□□ -0.93
HDAC6-216ENST00000468949 SREBF1P36956 1147 aa9.23□□□□□ -0.93
HDAC6-216ENST00000468949 RGS19P49795 217 aa9.23□□□□□ -0.93
HDAC6-216ENST00000468949 ALDH5A1P51649 535 aaPredicted RBP9.23□□□□□ -0.93
HDAC6-216ENST00000468949 UBXN2AP68543 259 aa9.23□□□□□ -0.93
HDAC6-216ENST00000468949 KRT85P78386 507 aa9.23□□□□□ -0.93
HDAC6-216ENST00000468949 SETQ01105 290 aaPredicted RBP9.23□□□□□ -0.93
HDAC6-216ENST00000468949 GHRHRQ02643 423 aa9.23□□□□□ -0.93
HDAC6-216ENST00000468949 MLLT1Q03111 559 aaPredicted RBP9.23□□□□□ -0.93
HDAC6-216ENST00000468949 PRKCZQ05513 592 aa9.23□□□□□ -0.93
HDAC6-216ENST00000468949 MAP2K5Q13163 448 aa9.23□□□□□ -0.93
HDAC6-216ENST00000468949 NPY5RQ15761 445 aa9.23□□□□□ -0.93
HDAC6-216ENST00000468949 CSPP1Q1MSJ5 1256 aa9.23□□□□□ -0.93
HDAC6-216ENST00000468949 GNPTABQ3T906 1256 aa9.23□□□□□ -0.93
HDAC6-216ENST00000468949 TTC38Q5R3I4 469 aa9.23□□□□□ -0.93
HDAC6-216ENST00000468949 MYSM1Q5VVJ2 828 aa9.23□□□□□ -0.93
HDAC6-216ENST00000468949 XRRA1Q6P2D8 792 aa9.23□□□□□ -0.93
HDAC6-216ENST00000468949 SLAIN1Q8ND83 568 aa9.23□□□□□ -0.93
HDAC6-216ENST00000468949 TBC1D5Q92609 795 aa9.23□□□□□ -0.93
HDAC6-216ENST00000468949 ZNF333Q96JL9 665 aa9.23□□□□□ -0.93
HDAC6-216ENST00000468949 GBP4Q96PP9 640 aa9.23□□□□□ -0.93
HDAC6-216ENST00000468949 CFAP45Q9UL16 551 aa9.23□□□□□ -0.93
HDAC6-216ENST00000468949 LOC102724159A0A0B4J2E5 919 aa9.22□□□□□ -0.93
HDAC6-216ENST00000468949 GOLGA6L22H0YM25 854 aa9.22□□□□□ -0.93
HDAC6-216ENST00000468949 M0R2N6 131 aa9.22□□□□□ -0.93
HDAC6-216ENST00000468949 NEMFO60524 1076 aa9.22□□□□□ -0.93
HDAC6-216ENST00000468949 STAM2O75886 525 aa9.22□□□□□ -0.93
HDAC6-216ENST00000468949 GRK4P32298 578 aa9.22□□□□□ -0.93
HDAC6-216ENST00000468949 MCM7P33993 719 aa9.22□□□□□ -0.93
HDAC6-216ENST00000468949 DDIT3P35638 169 aa9.22□□□□□ -0.93
HDAC6-216ENST00000468949 CNTN2Q02246 1040 aa9.22□□□□□ -0.93
HDAC6-216ENST00000468949 ORC2Q13416 577 aaPredicted RBP9.22□□□□□ -0.93
HDAC6-216ENST00000468949 PGM5Q15124 567 aa9.22□□□□□ -0.93
HDAC6-216ENST00000468949 PWP2Q15269 919 aaKnown RBP9.22□□□□□ -0.93
HDAC6-216ENST00000468949 SF3A1Q15459 793 aaKnown RBP9.22□□□□□ -0.93
HDAC6-216ENST00000468949 STXBP2Q15833 593 aa9.22□□□□□ -0.93
HDAC6-216ENST00000468949 PCNX4Q63HM2 1172 aa9.22□□□□□ -0.93
HDAC6-216ENST00000468949 ATL3Q6DD88 541 aa9.22□□□□□ -0.93
HDAC6-216ENST00000468949 NLRX1Q86UT6 975 aa9.22□□□□□ -0.93
HDAC6-216ENST00000468949 TRMT44Q8IYL2 757 aaKnown RBP9.22□□□□□ -0.93
HDAC6-216ENST00000468949 SH3TC2Q8TF17 1288 aa9.22□□□□□ -0.93
HDAC6-216ENST00000468949 TNFRSF25Q93038 417 aa9.22□□□□□ -0.93
HDAC6-216ENST00000468949 TAAR1Q96RJ0 339 aa9.22□□□□□ -0.93
HDAC6-216ENST00000468949 IWS1Q96ST2 819 aa9.22□□□□□ -0.93
HDAC6-216ENST00000468949 COL20A1Q9P218 1284 aa9.22□□□□□ -0.93
HDAC6-216ENST00000468949 DDX25Q9UHL0 483 aaKnown RBP9.22□□□□□ -0.93
HDAC6-216ENST00000468949 CNPY2Q9Y2B0 182 aa9.22□□□□□ -0.93
HDAC6-216ENST00000468949 PLXNB2O15031 1838 aa9.21□□□□□ -0.93
HDAC6-216ENST00000468949 FAM205CA6NFA0 338 aa9.21□□□□□ -0.94
HDAC6-216ENST00000468949 FIBPO43427 364 aa9.21□□□□□ -0.94
HDAC6-216ENST00000468949 BAG4O95429 457 aaKnown RBP9.21□□□□□ -0.94
HDAC6-216ENST00000468949 NR3C2P08235 984 aa9.21□□□□□ -0.94
HDAC6-216ENST00000468949 CYP2B6P20813 491 aa9.21□□□□□ -0.94
HDAC6-216ENST00000468949 FLT3LGP49771 235 aa9.21□□□□□ -0.94
HDAC6-216ENST00000468949 USP11P51784 963 aa9.21□□□□□ -0.94
HDAC6-216ENST00000468949 CEBPZQ03701 1054 aaKnown RBP9.21□□□□□ -0.94
HDAC6-216ENST00000468949 IRF5Q13568 498 aa9.21□□□□□ -0.94
HDAC6-216ENST00000468949 STK38Q15208 465 aa9.21□□□□□ -0.94
HDAC6-216ENST00000468949 TMEM266Q2M3C6 531 aa9.21□□□□□ -0.94
HDAC6-216ENST00000468949 PRR16Q569H4 304 aa9.21□□□□□ -0.94
HDAC6-216ENST00000468949 MORN1Q5T089 497 aa9.21□□□□□ -0.94
HDAC6-216ENST00000468949 MFSD14CQ5VZR4 134 aa9.21□□□□□ -0.94
HDAC6-216ENST00000468949 FAM133AQ8N9E0 248 aa9.21□□□□□ -0.94
HDAC6-216ENST00000468949 MS4A3Q96HJ5 214 aa9.21□□□□□ -0.94
HDAC6-216ENST00000468949 CDHR1Q96JP9 859 aa9.21□□□□□ -0.94
HDAC6-216ENST00000468949 PDCD2LQ9BRP1 358 aa9.21□□□□□ -0.94
HDAC6-216ENST00000468949 TMEM106CQ9BVX2 250 aa9.21□□□□□ -0.94
HDAC6-216ENST00000468949 DIS3Q9Y2L1 958 aaKnown RBP9.21□□□□□ -0.94
HDAC6-216ENST00000468949 FRMPD4Q14CM0 1322 aa9.21□□□□□ -0.94
HDAC6-216ENST00000468949 RPTORQ8N122 1335 aa9.21□□□□□ -0.94
HDAC6-216ENST00000468949 DNAJC25-GNG10A0A024R161 153 aa9.2□□□□□ -0.94
HDAC6-216ENST00000468949 GOLGA6L4A6NEF3 574 aa9.2□□□□□ -0.94
HDAC6-216ENST00000468949 HAX1O00165 279 aa9.2□□□□□ -0.94
HDAC6-216ENST00000468949 COBLO75128 1261 aa9.2□□□□□ -0.94
HDAC6-216ENST00000468949 DNM1Q05193 864 aaKnown RBP9.2□□□□□ -0.94
HDAC6-216ENST00000468949 MTMR1Q13613 665 aa9.2□□□□□ -0.94
HDAC6-216ENST00000468949 ZNF174Q15697 407 aa9.2□□□□□ -0.94
HDAC6-216ENST00000468949 CALCRLQ16602 461 aa9.2□□□□□ -0.94
HDAC6-216ENST00000468949 ZNF792Q3KQV3 632 aa9.2□□□□□ -0.94
HDAC6-216ENST00000468949 CEP55Q53EZ4 464 aa9.2□□□□□ -0.94
HDAC6-216ENST00000468949 EARS2Q5JPH6 523 aaKnown RBP9.2□□□□□ -0.94
HDAC6-216ENST00000468949 ANO1Q5XXA6 986 aa9.2□□□□□ -0.94
HDAC6-216ENST00000468949 FAM173BQ6P4H8 233 aa9.2□□□□□ -0.94
HDAC6-216ENST00000468949 MOXD1Q6UVY6 613 aa9.2□□□□□ -0.94
HDAC6-216ENST00000468949 ARMCX2Q7L311 632 aa9.2□□□□□ -0.94
HDAC6-216ENST00000468949 PLA2G4DQ86XP0 818 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms