RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 PLEKHF1Q96S99 279 aa5.42□□□□□ -1.54
SF3B1-207ENST00000468925 RUFY1Q96T51 708 aa5.42□□□□□ -1.54
SF3B1-207ENST00000468925 MPHOSPH6Q99547 160 aaKnown RBP5.42□□□□□ -1.54
SF3B1-207ENST00000468925 SH3GL2Q99962 352 aa5.42□□□□□ -1.54
SF3B1-207ENST00000468925 LLPHQ9BRT6 129 aaKnown RBP5.42□□□□□ -1.54
SF3B1-207ENST00000468925 TRIM7Q9C029 511 aa5.42□□□□□ -1.54
SF3B1-207ENST00000468925 PIF1Q9H611 641 aa5.42□□□□□ -1.54
SF3B1-207ENST00000468925 EBF2Q9HAK2 575 aa5.42□□□□□ -1.54
SF3B1-207ENST00000468925 ABCB6Q9NP58 842 aa5.42□□□□□ -1.54
SF3B1-207ENST00000468925 CWC25Q9NXE8 425 aaPredicted RBP5.42□□□□□ -1.54
SF3B1-207ENST00000468925 RCOR1Q9UKL0 485 aa5.42□□□□□ -1.54
SF3B1-207ENST00000468925 RTCBQ9Y3I0 505 aaKnown RBP5.42□□□□□ -1.54
SF3B1-207ENST00000468925 GMEB1Q9Y692 573 aa5.42□□□□□ -1.54
SF3B1-207ENST00000468925 CDK12Q9NYV4 1490 aaPredicted RBP5.42□□□□□ -1.54
SF3B1-207ENST00000468925 LMTK2Q8IWU2 1503 aa5.42□□□□□ -1.54
SF3B1-207ENST00000468925 UBN2Q6ZU65 1347 aa5.42□□□□□ -1.54
SF3B1-207ENST00000468925 CDC42BPGQ6DT37 1551 aa5.42□□□□□ -1.54
SF3B1-207ENST00000468925 SETBP1Q9Y6X0 1596 aa5.42□□□□□ -1.54
SF3B1-207ENST00000468925 PTPRTO14522 1441 aa5.41□□□□□ -1.54
SF3B1-207ENST00000468925 ZFYVE9O95405 1425 aa5.41□□□□□ -1.54
SF3B1-207ENST00000468925 TSPOAP1O95153 1857 aa5.41□□□□□ -1.54
SF3B1-207ENST00000468925 ERVK-7P63135 1459 aa5.41□□□□□ -1.54
SF3B1-207ENST00000468925 VWA3AA6NCI4 1184 aa5.41□□□□□ -1.54
SF3B1-207ENST00000468925 GOLGA6BA6NDN3 693 aa5.41□□□□□ -1.54
SF3B1-207ENST00000468925 STXBP3O00186 592 aa5.41□□□□□ -1.54
SF3B1-207ENST00000468925 MGRN1O60291 552 aa5.41□□□□□ -1.54
SF3B1-207ENST00000468925 DNAJC8O75937 253 aaPredicted RBP5.41□□□□□ -1.54
SF3B1-207ENST00000468925 PARNO95453 639 aaKnown RBP5.41□□□□□ -1.54
SF3B1-207ENST00000468925 ATP2B4P23634 1241 aa5.41□□□□□ -1.54
SF3B1-207ENST00000468925 MAPK1P28482 360 aa5.41□□□□□ -1.54
SF3B1-207ENST00000468925 KIF5BP33176 963 aa5.41□□□□□ -1.54
SF3B1-207ENST00000468925 SCNN1AP37088 669 aa5.41□□□□□ -1.54
SF3B1-207ENST00000468925 IREB2P48200 963 aaKnown RBP5.41□□□□□ -1.54
SF3B1-207ENST00000468925 MTHFSP49914 203 aa5.41□□□□□ -1.54
SF3B1-207ENST00000468925 CCT4P50991 539 aaKnown RBP5.41□□□□□ -1.54
SF3B1-207ENST00000468925 AK2P54819 239 aa5.41□□□□□ -1.54
SF3B1-207ENST00000468925 MRPS25P82663 173 aaKnown RBP5.41□□□□□ -1.54
SF3B1-207ENST00000468925 XRCC4Q13426 336 aa5.41□□□□□ -1.54
SF3B1-207ENST00000468925 CUL3Q13618 768 aa5.41□□□□□ -1.54
SF3B1-207ENST00000468925 LAMB3Q13751 1172 aa5.41□□□□□ -1.54
SF3B1-207ENST00000468925 KRT32Q14532 448 aa5.41□□□□□ -1.54
SF3B1-207ENST00000468925 SLC4A8Q2Y0W8 1093 aa5.41□□□□□ -1.54
SF3B1-207ENST00000468925 TBC1D25Q3MII6 688 aa5.41□□□□□ -1.54
SF3B1-207ENST00000468925 LACTB2Q53H82 288 aaPredicted RBP5.41□□□□□ -1.54
SF3B1-207ENST00000468925 HHATQ5VTY9 493 aa5.41□□□□□ -1.54
SF3B1-207ENST00000468925 TTC19Q6DKK2 380 aaPredicted RBP5.41□□□□□ -1.54
SF3B1-207ENST00000468925 PPP4R3AQ6IN85 833 aa5.41□□□□□ -1.54
SF3B1-207ENST00000468925 KLHL10Q6JEL2 608 aa5.41□□□□□ -1.54
SF3B1-207ENST00000468925 GDF6Q6KF10 455 aaPredicted RBP5.41□□□□□ -1.54
SF3B1-207ENST00000468925 NAA16Q6N069 864 aaPredicted RBP5.41□□□□□ -1.54
SF3B1-207ENST00000468925 ARMCX5Q6P1M9 558 aa5.41□□□□□ -1.54
SF3B1-207ENST00000468925 CEP85Q6P2H3 762 aa5.41□□□□□ -1.54
SF3B1-207ENST00000468925 CYB5D1Q6P9G0 228 aa5.41□□□□□ -1.54
SF3B1-207ENST00000468925 WFDC8Q8IUA0 241 aa5.41□□□□□ -1.54
SF3B1-207ENST00000468925 VSTM4Q8IW00 320 aa5.41□□□□□ -1.54
SF3B1-207ENST00000468925 RNF168Q8IYW5 571 aaPredicted RBP5.41□□□□□ -1.54
SF3B1-207ENST00000468925 ARHGAP18Q8N392 663 aa5.41□□□□□ -1.54
SF3B1-207ENST00000468925 GALNT15Q8N3T1 639 aa5.41□□□□□ -1.54
SF3B1-207ENST00000468925 IGSF22Q8N9C0 903 aa5.41□□□□□ -1.54
SF3B1-207ENST00000468925 LSM14AQ8ND56 463 aaKnown RBP5.41□□□□□ -1.54
SF3B1-207ENST00000468925 CCDC12Q8WUD4 166 aaPredicted RBP5.41□□□□□ -1.54
SF3B1-207ENST00000468925 LMBR1Q8WVP7 490 aa5.41□□□□□ -1.54
SF3B1-207ENST00000468925 JAKMIP2Q96AA8 810 aa5.41□□□□□ -1.54
SF3B1-207ENST00000468925 TBC1D31Q96DN5 1066 aa5.41□□□□□ -1.54
SF3B1-207ENST00000468925 CCDC114Q96M63 670 aa5.41□□□□□ -1.54
SF3B1-207ENST00000468925 ASB16Q96NS5 453 aa5.41□□□□□ -1.54
SF3B1-207ENST00000468925 NAP1L3Q99457 506 aaPredicted RBP5.41□□□□□ -1.54
SF3B1-207ENST00000468925 CCDC28BQ9BUN5 200 aa5.41□□□□□ -1.54
SF3B1-207ENST00000468925 EPN3Q9H201 632 aa5.41□□□□□ -1.54
SF3B1-207ENST00000468925 RANBP17Q9H2T7 1088 aaKnown RBP5.41□□□□□ -1.54
SF3B1-207ENST00000468925 ANKZF1Q9H8Y5 726 aa5.41□□□□□ -1.54
SF3B1-207ENST00000468925 HYPKQ9NX55 129 aa5.41□□□□□ -1.54
SF3B1-207ENST00000468925 HMG20BQ9P0W2 317 aa5.41□□□□□ -1.54
SF3B1-207ENST00000468925 CIDEBQ9UHD4 219 aa5.41□□□□□ -1.54
SF3B1-207ENST00000468925 HPCAL4Q9UM19 191 aa5.41□□□□□ -1.54
SF3B1-207ENST00000468925 INO80Q9ULG1 1556 aaPredicted RBP5.41□□□□□ -1.54
SF3B1-207ENST00000468925 ARHGEF10O15013 1369 aa5.41□□□□□ -1.54
SF3B1-207ENST00000468925 NSD3Q9BZ95 1437 aa5.4□□□□□ -1.54
SF3B1-207ENST00000468925 NUP153P49790 1475 aaKnown RBP5.4□□□□□ -1.54
SF3B1-207ENST00000468925 TRPM2O94759 1503 aa5.4□□□□□ -1.54
SF3B1-207ENST00000468925 LRRD1A4D1F6 860 aa5.4□□□□□ -1.54
SF3B1-207ENST00000468925 VPS37CA5D8V6 355 aaPredicted RBP5.4□□□□□ -1.54
SF3B1-207ENST00000468925 RASSF10A6NK89 507 aa5.4□□□□□ -1.54
SF3B1-207ENST00000468925 H3BRB1 525 aa5.4□□□□□ -1.54
SF3B1-207ENST00000468925 OPLAHO14841 1288 aa5.4□□□□□ -1.54
SF3B1-207ENST00000468925 FOXO3O43524 673 aa5.4□□□□□ -1.54
SF3B1-207ENST00000468925 CREB3O43889 395 aa5.4□□□□□ -1.54
SF3B1-207ENST00000468925 CEP104O60308 925 aa5.4□□□□□ -1.54
SF3B1-207ENST00000468925 PFKFB2O60825 505 aa5.4□□□□□ -1.54
SF3B1-207ENST00000468925 XYLBO75191 536 aa5.4□□□□□ -1.54
SF3B1-207ENST00000468925 PEX14O75381 377 aa5.4□□□□□ -1.54
SF3B1-207ENST00000468925 FLOT1O75955 427 aa5.4□□□□□ -1.54
SF3B1-207ENST00000468925 MAP4K4O95819 1239 aaPredicted RBP5.4□□□□□ -1.54
SF3B1-207ENST00000468925 SYF2O95926 243 aaKnown RBP5.4□□□□□ -1.54
SF3B1-207ENST00000468925 FAM107AO95990 144 aa5.4□□□□□ -1.54
SF3B1-207ENST00000468925 PENKP01210 267 aaPredicted RBP5.4□□□□□ -1.54
SF3B1-207ENST00000468925 GSTA2P09210 222 aa5.4□□□□□ -1.54
SF3B1-207ENST00000468925 CCNG1P51959 295 aa5.4□□□□□ -1.54
SF3B1-207ENST00000468925 UBASH3AP57075 661 aa5.4□□□□□ -1.54
SF3B1-207ENST00000468925 NLRP12P59046 1061 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms