RNA–Protein interactions for RNA: ENST00000467789.5

SSR3-205, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2 BASIC

Gene SSR3, Length 1,039 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-205ENST00000467789 EIF3JO75822 258 aaKnown RBP12.02□□□□□ -0.49
SSR3-205ENST00000467789 DDAH1O94760 285 aa12.02□□□□□ -0.49
SSR3-205ENST00000467789 CFBP00751 764 aa12.02□□□□□ -0.49
SSR3-205ENST00000467789 SUPT20HL2P0C7V6 817 aa12.02□□□□□ -0.49
SSR3-205ENST00000467789 ITGB8P26012 769 aa12.02□□□□□ -0.49
SSR3-205ENST00000467789 MCM5P33992 734 aa12.02□□□□□ -0.49
SSR3-205ENST00000467789 SMAD3P84022 425 aaKnown RBP12.02□□□□□ -0.49
SSR3-205ENST00000467789 PPIGQ13427 754 aaKnown RBP eCLIP12.02□□□□□ -0.49
SSR3-205ENST00000467789 RNF20Q5VTR2 975 aa12.02□□□□□ -0.49
SSR3-205ENST00000467789 STOX1Q6ZVD7 989 aa12.02□□□□□ -0.49
SSR3-205ENST00000467789 OR6J1Q8NGC5 347 aa12.02□□□□□ -0.49
SSR3-205ENST00000467789 LARP6Q9BRS8 491 aaKnown RBP12.02□□□□□ -0.49
SSR3-205ENST00000467789 LSG1Q9H089 658 aaKnown RBP12.02□□□□□ -0.49
SSR3-205ENST00000467789 DDX49Q9Y6V7 483 aaKnown RBP12.02□□□□□ -0.49
SSR3-205ENST00000467789 CALM1P0DP23 149 aa12.01□□□□□ -0.49
SSR3-205ENST00000467789 CALM2P0DP24 149 aa12.01□□□□□ -0.49
SSR3-205ENST00000467789 CALM3P0DP25 149 aa12.01□□□□□ -0.49
SSR3-205ENST00000467789 LIFRP42702 1097 aa12.01□□□□□ -0.49
SSR3-205ENST00000467789 GNAQP50148 359 aa12.01□□□□□ -0.49
SSR3-205ENST00000467789 ANTXR2P58335 489 aa12.01□□□□□ -0.49
SSR3-205ENST00000467789 PURAQ00577 322 aaKnown RBP12.01□□□□□ -0.49
SSR3-205ENST00000467789 PTPN11Q06124 597 aaPredicted RBP12.01□□□□□ -0.49
SSR3-205ENST00000467789 C9orf50Q5SZB4 431 aa12.01□□□□□ -0.49
SSR3-205ENST00000467789 ARHGEF16Q5VV41 709 aa12.01□□□□□ -0.49
SSR3-205ENST00000467789 CCDC62Q6P9F0 684 aa12.01□□□□□ -0.49
SSR3-205ENST00000467789 KCNV1Q6PIU1 500 aa12.01□□□□□ -0.49
SSR3-205ENST00000467789 TMEM92Q6UXU6 159 aa12.01□□□□□ -0.49
SSR3-205ENST00000467789 CTCFLQ8NI51 663 aaPredicted RBP12.01□□□□□ -0.49
SSR3-205ENST00000467789 TBC1D5Q92609 795 aa12.01□□□□□ -0.49
SSR3-205ENST00000467789 TAAR1Q96RJ0 339 aa12.01□□□□□ -0.49
SSR3-205ENST00000467789 LZTS2Q9BRK4 669 aa12.01□□□□□ -0.49
SSR3-205ENST00000467789 MTG1Q9BT17 334 aaPredicted RBP12.01□□□□□ -0.49
SSR3-205ENST00000467789 SPZ1Q9BXG8 430 aa12.01□□□□□ -0.49
SSR3-205ENST00000467789 ANO2Q9NQ90 1003 aa12.01□□□□□ -0.49
SSR3-205ENST00000467789 PXMP2Q9NR77 195 aa12.01□□□□□ -0.49
SSR3-205ENST00000467789 MTMR10Q9NXD2 777 aa12.01□□□□□ -0.49
SSR3-205ENST00000467789 SCN10AQ9Y5Y9 1956 aa12.01□□□□□ -0.49
SSR3-205ENST00000467789 TMEM265A0A087WTH1 108 aa12□□□□□ -0.49
SSR3-205ENST00000467789 OPLAHO14841 1288 aa12□□□□□ -0.49
SSR3-205ENST00000467789 SNPHO15079 494 aa12□□□□□ -0.49
SSR3-205ENST00000467789 PRC1O43663 620 aa12□□□□□ -0.49
SSR3-205ENST00000467789 GH1P01241 217 aa12□□□□□ -0.49
SSR3-205ENST00000467789 NR3C2P08235 984 aa12□□□□□ -0.49
SSR3-205ENST00000467789 NECTIN1Q15223 517 aa12□□□□□ -0.49
SSR3-205ENST00000467789 TMEM63BQ5T3F8 832 aa12□□□□□ -0.49
SSR3-205ENST00000467789 NFRKBQ6P4R8 1299 aa12□□□□□ -0.49
SSR3-205ENST00000467789 PSRC1Q6PGN9 363 aaPredicted RBP12□□□□□ -0.49
SSR3-205ENST00000467789 HOMER1Q86YM7 354 aa12□□□□□ -0.49
SSR3-205ENST00000467789 RNPC3Q96LT9 517 aaKnown RBP12□□□□□ -0.49
SSR3-205ENST00000467789 PIGSQ96S52 555 aa12□□□□□ -0.49
SSR3-205ENST00000467789 HIPK3Q9H422 1215 aa12□□□□□ -0.49
SSR3-205ENST00000467789 LY9Q9HBG7 655 aa12□□□□□ -0.49
SSR3-205ENST00000467789 COL20A1Q9P218 1284 aa12□□□□□ -0.49
SSR3-205ENST00000467789 STXBP5LQ9Y2K9 1186 aa12□□□□□ -0.49
SSR3-205ENST00000467789 TAF6LQ9Y6J9 622 aa12□□□□□ -0.49
SSR3-205ENST00000467789 GRIN2DO15399 1336 aa12□□□□□ -0.49
SSR3-205ENST00000467789 BAZ2BQ9UIF8 2168 aaKnown RBP11.99□□□□□ -0.49
SSR3-205ENST00000467789 CCDC69A6NI79 296 aa11.99□□□□□ -0.49
SSR3-205ENST00000467789 GCOM1H8Y6P7 765 aaPredicted RBP11.99□□□□□ -0.49
SSR3-205ENST00000467789 SLC27A2O14975 620 aa11.99□□□□□ -0.49
SSR3-205ENST00000467789 CYTH3O43739 400 aa11.99□□□□□ -0.49
SSR3-205ENST00000467789 PPP1R11O60927 126 aaPredicted RBP11.99□□□□□ -0.49
SSR3-205ENST00000467789 MYL3P08590 195 aa11.99□□□□□ -0.49
SSR3-205ENST00000467789 POLR2MP0CAP2 368 aa11.99□□□□□ -0.49
SSR3-205ENST00000467789 TGFB3P10600 412 aa11.99□□□□□ -0.49
SSR3-205ENST00000467789 EIF2AK2P19525 551 aaKnown RBP11.99□□□□□ -0.49
SSR3-205ENST00000467789 ZNF697Q5TEC3 545 aa11.99□□□□□ -0.49
SSR3-205ENST00000467789 CREB3L3Q68CJ9 461 aa11.99□□□□□ -0.49
SSR3-205ENST00000467789 CHST3Q7LGC8 479 aa11.99□□□□□ -0.49
SSR3-205ENST00000467789 ZNF654Q8IZM8 581 aa11.99□□□□□ -0.49
SSR3-205ENST00000467789 EMID1Q96A84 441 aaPredicted RBP11.99□□□□□ -0.49
SSR3-205ENST00000467789 PDCD2LQ9BRP1 358 aa11.99□□□□□ -0.49
SSR3-205ENST00000467789 ALDH8A1Q9H2A2 487 aaPredicted RBP11.99□□□□□ -0.49
SSR3-205ENST00000467789 MTIF3Q9H2K0 278 aaKnown RBP11.99□□□□□ -0.49
SSR3-205ENST00000467789 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.98□□□□□ -0.49
SSR3-205ENST00000467789 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.98□□□□□ -0.49
SSR3-205ENST00000467789 SH2B2O14492 632 aaPredicted RBP11.98□□□□□ -0.49
SSR3-205ENST00000467789 B4GALT4O60513 344 aa11.98□□□□□ -0.49
SSR3-205ENST00000467789 CDC45O75419 566 aa11.98□□□□□ -0.49
SSR3-205ENST00000467789 STAM2O75886 525 aa11.98□□□□□ -0.49
SSR3-205ENST00000467789 CASTP20810 708 aaKnown RBP11.98□□□□□ -0.49
SSR3-205ENST00000467789 EPHB4P54760 987 aa11.98□□□□□ -0.49
SSR3-205ENST00000467789 TSGA10IPQ3SY00 556 aa11.98□□□□□ -0.49
SSR3-205ENST00000467789 PPP1R15BQ5SWA1 713 aa11.98□□□□□ -0.49
SSR3-205ENST00000467789 NFXL1Q6ZNB6 911 aa11.98□□□□□ -0.49
SSR3-205ENST00000467789 SEPT14Q6ZU15 432 aa11.98□□□□□ -0.49
SSR3-205ENST00000467789 Q7L0L9 218 aa11.98□□□□□ -0.49
SSR3-205ENST00000467789 VSIG10LQ86VR7 867 aa11.98□□□□□ -0.49
SSR3-205ENST00000467789 RPUSD2Q8IZ73 545 aaKnown RBP11.98□□□□□ -0.49
SSR3-205ENST00000467789 RRP36Q96EU6 259 aaKnown RBP11.98□□□□□ -0.49
SSR3-205ENST00000467789 NOC4LQ9BVI4 516 aaKnown RBP11.98□□□□□ -0.49
SSR3-205ENST00000467789 PPP1R12CQ9BZL4 782 aa11.98□□□□□ -0.49
SSR3-205ENST00000467789 SENP2Q9HC62 589 aa11.98□□□□□ -0.49
SSR3-205ENST00000467789 IL23AQ9NPF7 189 aa11.98□□□□□ -0.49
SSR3-205ENST00000467789 SEC63Q9UGP8 760 aaKnown RBP11.98□□□□□ -0.49
SSR3-205ENST00000467789 MRVI1Q9Y6F6 885 aa11.98□□□□□ -0.49
SSR3-205ENST00000467789 COL6A3P12111 3177 aa11.98□□□□□ -0.49
SSR3-205ENST00000467789 ARIH2O95376 493 aa11.97□□□□□ -0.49
SSR3-205ENST00000467789 PFKMP08237 780 aa11.97□□□□□ -0.49
SSR3-205ENST00000467789 MMP3P08254 477 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms