RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 PCDHA5Q9Y5H7 936 aa5.77□□□□□ -1.49
VPS50-209ENST00000467326 ARNTLO00327 626 aa5.76□□□□□ -1.49
VPS50-209ENST00000467326 IRS4O14654 1257 aaPredicted RBP5.76□□□□□ -1.49
VPS50-209ENST00000467326 PRODHO43272 600 aa5.76□□□□□ -1.49
VPS50-209ENST00000467326 PABPC1P11940 636 aaKnown RBP5.76□□□□□ -1.49
VPS50-209ENST00000467326 LCP1P13796 627 aa5.76□□□□□ -1.49
VPS50-209ENST00000467326 PFKLP17858 780 aa5.76□□□□□ -1.49
VPS50-209ENST00000467326 FBLN1P23142 703 aa5.76□□□□□ -1.49
VPS50-209ENST00000467326 BCL6P41182 706 aa5.76□□□□□ -1.49
VPS50-209ENST00000467326 NCKAP1LP55160 1127 aa5.76□□□□□ -1.49
VPS50-209ENST00000467326 RBL2Q08999 1139 aa5.76□□□□□ -1.49
VPS50-209ENST00000467326 IFRD2Q12894 506 aaPredicted RBP5.76□□□□□ -1.49
VPS50-209ENST00000467326 YOD1Q5VVQ6 348 aaPredicted RBP5.76□□□□□ -1.49
VPS50-209ENST00000467326 PMFBP1Q8TBY8 1022 aa5.76□□□□□ -1.49
VPS50-209ENST00000467326 ALG3Q92685 438 aa5.76□□□□□ -1.49
VPS50-209ENST00000467326 OSBP2Q969R2 916 aa5.76□□□□□ -1.49
VPS50-209ENST00000467326 TMEM169Q96HH4 297 aa5.76□□□□□ -1.49
VPS50-209ENST00000467326 AP5M1Q9H0R1 490 aa5.76□□□□□ -1.49
VPS50-209ENST00000467326 SNTG2Q9NY99 539 aa5.76□□□□□ -1.49
VPS50-209ENST00000467326 PLA2G2DQ9UNK4 145 aa5.76□□□□□ -1.49
VPS50-209ENST00000467326 PCDHA2Q9Y5H9 948 aa5.76□□□□□ -1.49
VPS50-209ENST00000467326 NPFFR2Q9Y5X5 522 aa5.76□□□□□ -1.49
VPS50-209ENST00000467326 BUB1BO60566 1050 aaPredicted RBP5.75□□□□□ -1.49
VPS50-209ENST00000467326 SLC9A5Q14940 896 aa5.75□□□□□ -1.49
VPS50-209ENST00000467326 TARBP2Q15633 366 aaKnown RBP5.75□□□□□ -1.49
VPS50-209ENST00000467326 SOGA3Q5TF21 947 aa5.75□□□□□ -1.49
VPS50-209ENST00000467326 MROH9Q5TGP6 573 aa5.75□□□□□ -1.49
VPS50-209ENST00000467326 NSMFQ6X4W1 530 aa5.75□□□□□ -1.49
VPS50-209ENST00000467326 CEP68Q76N32 757 aa5.75□□□□□ -1.49
VPS50-209ENST00000467326 RIOX2Q8IUF8 465 aa5.75□□□□□ -1.49
VPS50-209ENST00000467326 TRMT2BQ96GJ1 504 aaKnown RBP5.75□□□□□ -1.49
VPS50-209ENST00000467326 BORCS6Q96GS4 357 aa5.75□□□□□ -1.49
VPS50-209ENST00000467326 CHAMP1Q96JM3 812 aa5.75□□□□□ -1.49
VPS50-209ENST00000467326 DNAJC2Q99543 621 aaKnown RBP5.75□□□□□ -1.49
VPS50-209ENST00000467326 PHF20Q9BVI0 1012 aa5.75□□□□□ -1.49
VPS50-209ENST00000467326 RNF38Q9H0F5 515 aa5.75□□□□□ -1.49
VPS50-209ENST00000467326 COA3Q9Y2R0 106 aaPredicted RBP5.75□□□□□ -1.49
VPS50-209ENST00000467326 SIT1Q9Y3P8 196 aa5.75□□□□□ -1.49
VPS50-209ENST00000467326 ADCY3O60266 1144 aa5.74□□□□□ -1.49
VPS50-209ENST00000467326 DIAPH1O60610 1272 aaKnown RBP5.74□□□□□ -1.49
VPS50-209ENST00000467326 ZBTB7AO95365 584 aa5.74□□□□□ -1.49
VPS50-209ENST00000467326 IGFBP6P24592 240 aaPredicted RBP5.74□□□□□ -1.49
VPS50-209ENST00000467326 PMLP29590 882 aa5.74□□□□□ -1.49
VPS50-209ENST00000467326 SLC6A11P48066 632 aa5.74□□□□□ -1.49
VPS50-209ENST00000467326 LSAMPQ13449 338 aa5.74□□□□□ -1.49
VPS50-209ENST00000467326 ZNF385BQ569K4 471 aa5.74□□□□□ -1.49
VPS50-209ENST00000467326 LRP10Q7Z4F1 713 aa5.74□□□□□ -1.49
VPS50-209ENST00000467326 SEC14L1Q92503 715 aa5.74□□□□□ -1.49
VPS50-209ENST00000467326 SRPK1Q96SB4 655 aaKnown RBP5.74□□□□□ -1.49
VPS50-209ENST00000467326 IRF2BPLQ9H1B7 796 aa5.74□□□□□ -1.49
VPS50-209ENST00000467326 BCAS3Q9H6U6 928 aa5.74□□□□□ -1.49
VPS50-209ENST00000467326 GPR27Q9NS67 375 aa5.74□□□□□ -1.49
VPS50-209ENST00000467326 CLDND1Q9NY35 253 aa5.74□□□□□ -1.49
VPS50-209ENST00000467326 JAG2Q9Y219 1238 aa5.74□□□□□ -1.49
VPS50-209ENST00000467326 FAN1Q9Y2M0 1017 aa5.74□□□□□ -1.49
VPS50-209ENST00000467326 X6R8D5 127 aa5.74□□□□□ -1.49
VPS50-209ENST00000467326 IRS2Q9Y4H2 1338 aa5.74□□□□□ -1.49
VPS50-209ENST00000467326 FAM221BA6H8Z2 402 aa5.73□□□□□ -1.49
VPS50-209ENST00000467326 H7BY64 318 aa5.73□□□□□ -1.49
VPS50-209ENST00000467326 ASGR2P07307 311 aa5.73□□□□□ -1.49
VPS50-209ENST00000467326 LIMS1P48059 325 aa5.73□□□□□ -1.49
VPS50-209ENST00000467326 DCAF4Q8WV16 495 aa5.73□□□□□ -1.49
VPS50-209ENST00000467326 CDC6Q99741 560 aa5.73□□□□□ -1.49
VPS50-209ENST00000467326 NCAM1P13591 858 aa5.72□□□□□ -1.49
VPS50-209ENST00000467326 MC3RP41968 323 aa5.72□□□□□ -1.49
VPS50-209ENST00000467326 NTRK3Q16288 839 aa5.72□□□□□ -1.49
VPS50-209ENST00000467326 TCERG1LQ5VWI1 586 aa5.72□□□□□ -1.49
VPS50-209ENST00000467326 CNKSR3Q6P9H4 555 aa5.72□□□□□ -1.49
VPS50-209ENST00000467326 RSPO2Q6UXX9 243 aaPredicted RBP5.72□□□□□ -1.49
VPS50-209ENST00000467326 FAM129CQ86XR2 697 aa5.72□□□□□ -1.49
VPS50-209ENST00000467326 TMEM151BQ8IW70 566 aa5.72□□□□□ -1.49
VPS50-209ENST00000467326 TMEFF1Q8IYR6 380 aa5.72□□□□□ -1.49
VPS50-209ENST00000467326 ZBTB38Q8NAP3 1195 aaPredicted RBP5.72□□□□□ -1.49
VPS50-209ENST00000467326 OSBPL2Q9H1P3 480 aa5.72□□□□□ -1.49
VPS50-209ENST00000467326 EPB41L1Q9H4G0 881 aa5.72□□□□□ -1.49
VPS50-209ENST00000467326 EPB41L4AQ9HCS5 686 aaPredicted RBP5.72□□□□□ -1.49
VPS50-209ENST00000467326 KDM2BQ8NHM5 1336 aa5.72□□□□□ -1.49
VPS50-209ENST00000467326 TRBV23-1A0A0A0MS06 115 aa5.71□□□□□ -1.5
VPS50-209ENST00000467326 BLACEA4D250 179 aa5.71□□□□□ -1.5
VPS50-209ENST00000467326 SGSM2O43147 1006 aa5.71□□□□□ -1.5
VPS50-209ENST00000467326 MSCO60682 206 aa5.71□□□□□ -1.5
VPS50-209ENST00000467326 HOXA5P20719 270 aa5.71□□□□□ -1.5
VPS50-209ENST00000467326 GRK2P25098 689 aa5.71□□□□□ -1.5
VPS50-209ENST00000467326 GRK3P35626 688 aa5.71□□□□□ -1.5
VPS50-209ENST00000467326 SUMO1P63165 101 aaKnown RBP5.71□□□□□ -1.5
VPS50-209ENST00000467326 CHRNA2Q15822 529 aa5.71□□□□□ -1.5
VPS50-209ENST00000467326 ERICH6BQ5W0A0 696 aa5.71□□□□□ -1.5
VPS50-209ENST00000467326 STYK1Q6J9G0 422 aa5.71□□□□□ -1.5
VPS50-209ENST00000467326 KCNT2Q6UVM3 1135 aa5.71□□□□□ -1.5
VPS50-209ENST00000467326 DPH6Q7L8W6 267 aa5.71□□□□□ -1.5
VPS50-209ENST00000467326 B3GNT8Q7Z7M8 397 aa5.71□□□□□ -1.5
VPS50-209ENST00000467326 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.71□□□□□ -1.5
VPS50-209ENST00000467326 PANK1Q8TE04 598 aa5.71□□□□□ -1.5
VPS50-209ENST00000467326 CPA5Q8WXQ8 436 aa5.71□□□□□ -1.5
VPS50-209ENST00000467326 MKL1Q969V6 931 aa5.71□□□□□ -1.5
VPS50-209ENST00000467326 IPO9Q96P70 1041 aaKnown RBP5.71□□□□□ -1.5
VPS50-209ENST00000467326 ZFYVE21Q9BQ24 234 aa5.71□□□□□ -1.5
VPS50-209ENST00000467326 PALD1Q9ULE6 856 aa5.71□□□□□ -1.5
VPS50-209ENST00000467326 ZNF652Q9Y2D9 606 aa5.71□□□□□ -1.5
VPS50-209ENST00000467326 DGKIO75912 1065 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms