RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 PDE4DQ08499 809 aa17.31■□□□□ 0.36
NPHP4-205ENST00000466897 EARS2Q5JPH6 523 aaKnown RBP17.31■□□□□ 0.36
NPHP4-205ENST00000466897 MFSD14CQ5VZR4 134 aa17.31■□□□□ 0.36
NPHP4-205ENST00000466897 FBXO46Q6PJ61 603 aaPredicted RBP17.31■□□□□ 0.36
NPHP4-205ENST00000466897 NIPA1Q7RTP0 329 aa17.31■□□□□ 0.36
NPHP4-205ENST00000466897 NEK8Q86SG6 692 aa17.31■□□□□ 0.36
NPHP4-205ENST00000466897 IL31RAQ8NI17 732 aa17.31■□□□□ 0.36
NPHP4-205ENST00000466897 PGBD1Q96JS3 809 aa17.31■□□□□ 0.36
NPHP4-205ENST00000466897 INPP4AQ96PE3 977 aaPredicted RBP17.31■□□□□ 0.36
NPHP4-205ENST00000466897 KATNBL1Q9H079 304 aa17.31■□□□□ 0.36
NPHP4-205ENST00000466897 ABHD16BQ9H3Z7 469 aa17.31■□□□□ 0.36
NPHP4-205ENST00000466897 VTA1Q9NP79 307 aa17.31■□□□□ 0.36
NPHP4-205ENST00000466897 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.31■□□□□ 0.36
NPHP4-205ENST00000466897 CIZ1Q9ULV3 898 aaPredicted RBP17.31■□□□□ 0.36
NPHP4-205ENST00000466897 PTCH2Q9Y6C5 1203 aa17.31■□□□□ 0.36
NPHP4-205ENST00000466897 CYP3A7-CYP3A51PA0A087WV96 503 aa17.3■□□□□ 0.36
NPHP4-205ENST00000466897 BRD1O95696 1058 aa17.3■□□□□ 0.36
NPHP4-205ENST00000466897 SNAI1O95863 264 aaPredicted RBP17.3■□□□□ 0.36
NPHP4-205ENST00000466897 ZSCAN22P10073 491 aaPredicted RBP17.3■□□□□ 0.36
NPHP4-205ENST00000466897 GCFC2P16383 781 aaKnown RBP17.3■□□□□ 0.36
NPHP4-205ENST00000466897 CYP3A7P24462 503 aa17.3■□□□□ 0.36
NPHP4-205ENST00000466897 GRK4P32298 578 aa17.3■□□□□ 0.36
NPHP4-205ENST00000466897 MRPS9P82933 396 aaKnown RBP17.3■□□□□ 0.36
NPHP4-205ENST00000466897 RESTQ13127 1097 aa17.3■□□□□ 0.36
NPHP4-205ENST00000466897 ORC2Q13416 577 aaPredicted RBP17.3■□□□□ 0.36
NPHP4-205ENST00000466897 MAP3K21Q5TCX8 1036 aa17.3■□□□□ 0.36
NPHP4-205ENST00000466897 MCTP1Q6DN14 999 aa17.3■□□□□ 0.36
NPHP4-205ENST00000466897 MBOAT7Q96N66 472 aa17.3■□□□□ 0.36
NPHP4-205ENST00000466897 UBIAD1Q9Y5Z9 338 aa17.3■□□□□ 0.36
NPHP4-205ENST00000466897 EDIL3O43854 480 aa17.29■□□□□ 0.36
NPHP4-205ENST00000466897 NUCB2P80303 420 aa17.29■□□□□ 0.36
NPHP4-205ENST00000466897 INF2Q27J81 1249 aa17.29■□□□□ 0.36
NPHP4-205ENST00000466897 GNPTABQ3T906 1256 aa17.29■□□□□ 0.36
NPHP4-205ENST00000466897 RILPL1Q5EBL4 403 aa17.29■□□□□ 0.36
NPHP4-205ENST00000466897 PPP4R3AQ6IN85 833 aa17.29■□□□□ 0.36
NPHP4-205ENST00000466897 GPRASP2Q96D09 838 aa17.29■□□□□ 0.36
NPHP4-205ENST00000466897 NOL7Q9UMY1 257 aaKnown RBP17.29■□□□□ 0.36
NPHP4-205ENST00000466897 CNPY2Q9Y2B0 182 aa17.29■□□□□ 0.36
NPHP4-205ENST00000466897 RBM47A0AV96 593 aaKnown RBP17.28■□□□□ 0.36
NPHP4-205ENST00000466897 FAM205CA6NFA0 338 aa17.28■□□□□ 0.36
NPHP4-205ENST00000466897 MAFGO15525 162 aa17.28■□□□□ 0.36
NPHP4-205ENST00000466897 MYCLP12524 364 aaPredicted RBP17.28■□□□□ 0.36
NPHP4-205ENST00000466897 CYBAP13498 195 aa17.28■□□□□ 0.36
NPHP4-205ENST00000466897 ICAM3P32942 547 aa17.28■□□□□ 0.36
NPHP4-205ENST00000466897 UBXN2AP68543 259 aa17.28■□□□□ 0.36
NPHP4-205ENST00000466897 SETQ01105 290 aaPredicted RBP17.28■□□□□ 0.36
NPHP4-205ENST00000466897 PKP1Q13835 747 aa17.28■□□□□ 0.36
NPHP4-205ENST00000466897 CEP55Q53EZ4 464 aa17.28■□□□□ 0.36
NPHP4-205ENST00000466897 KCNV1Q6PIU1 500 aa17.28■□□□□ 0.36
NPHP4-205ENST00000466897 CDHR1Q96JP9 859 aa17.28■□□□□ 0.36
NPHP4-205ENST00000466897 MXRA8Q9BRK3 442 aa17.28■□□□□ 0.36
NPHP4-205ENST00000466897 JADE2Q9NQC1 790 aa17.28■□□□□ 0.36
NPHP4-205ENST00000466897 DOCK5Q9H7D0 1870 aa17.28■□□□□ 0.36
NPHP4-205ENST00000466897 IGLV3-22A0A075B6J6 115 aa17.27■□□□□ 0.36
NPHP4-205ENST00000466897 MEIS1O00470 390 aa17.27■□□□□ 0.36
NPHP4-205ENST00000466897 RGS20O76081 388 aa17.27■□□□□ 0.36
NPHP4-205ENST00000466897 F13A1P00488 732 aa17.27■□□□□ 0.36
NPHP4-205ENST00000466897 ZNF865P0CJ78 1059 aaPredicted RBP17.27■□□□□ 0.36
NPHP4-205ENST00000466897 TGFB3P10600 412 aa17.27■□□□□ 0.36
NPHP4-205ENST00000466897 ELNP15502 786 aa17.27■□□□□ 0.36
NPHP4-205ENST00000466897 ITGB5P18084 799 aa17.27■□□□□ 0.36
NPHP4-205ENST00000466897 CYP2C19P33261 490 aa17.27■□□□□ 0.36
NPHP4-205ENST00000466897 ACVR2BQ13705 512 aa17.27■□□□□ 0.36
NPHP4-205ENST00000466897 Q4G0T1 1027 aa17.27■□□□□ 0.36
NPHP4-205ENST00000466897 MYSM1Q5VVJ2 828 aa17.27■□□□□ 0.36
NPHP4-205ENST00000466897 NLRX1Q86UT6 975 aa17.27■□□□□ 0.36
NPHP4-205ENST00000466897 TCHHQ07283 1943 aa17.27■□□□□ 0.35
NPHP4-205ENST00000466897 FAM86B1E9PN63 330 aa17.26■□□□□ 0.35
NPHP4-205ENST00000466897 FIBPO43427 364 aa17.26■□□□□ 0.35
NPHP4-205ENST00000466897 INHAP05111 366 aa17.26■□□□□ 0.35
NPHP4-205ENST00000466897 FAM86B2P0C5J1 330 aa17.26■□□□□ 0.35
NPHP4-205ENST00000466897 CACNB2Q08289 660 aaPredicted RBP17.26■□□□□ 0.35
NPHP4-205ENST00000466897 LETM2Q2VYF4 491 aa17.26■□□□□ 0.35
NPHP4-205ENST00000466897 TAPT1Q6NXT6 567 aa17.26■□□□□ 0.35
NPHP4-205ENST00000466897 FERMT3Q86UX7 667 aa17.26■□□□□ 0.35
NPHP4-205ENST00000466897 FBXO16Q8IX29 292 aaPredicted RBP17.26■□□□□ 0.35
NPHP4-205ENST00000466897 SCFD2Q8WU76 684 aa17.26■□□□□ 0.35
NPHP4-205ENST00000466897 LENG9Q96B70 501 aa17.26■□□□□ 0.35
NPHP4-205ENST00000466897 ZDHHC9Q9Y397 364 aa17.26■□□□□ 0.35
NPHP4-205ENST00000466897 WDR81Q562E7 1941 aa17.25■□□□□ 0.35
NPHP4-205ENST00000466897 CENPFP49454 3210 aa17.25■□□□□ 0.35
NPHP4-205ENST00000466897 SPATA31C2B4DYI2 1134 aa17.25■□□□□ 0.35
NPHP4-205ENST00000466897 PRKAR2AP13861 404 aaKnown RBP17.25■□□□□ 0.35
NPHP4-205ENST00000466897 ZNF76P36508 570 aa17.25■□□□□ 0.35
NPHP4-205ENST00000466897 TOB1P50616 345 aaPredicted RBP17.25■□□□□ 0.35
NPHP4-205ENST00000466897 MTMR1Q13613 665 aa17.25■□□□□ 0.35
NPHP4-205ENST00000466897 SLC9C1Q4G0N8 1177 aa17.25■□□□□ 0.35
NPHP4-205ENST00000466897 TTC38Q5R3I4 469 aa17.25■□□□□ 0.35
NPHP4-205ENST00000466897 IQSEC1Q6DN90 963 aa17.25■□□□□ 0.35
NPHP4-205ENST00000466897 ARMC5Q96C12 935 aa17.25■□□□□ 0.35
NPHP4-205ENST00000466897 DDX49Q9Y6V7 483 aaKnown RBP17.25■□□□□ 0.35
NPHP4-205ENST00000466897 TBX3O15119 743 aa17.24■□□□□ 0.35
NPHP4-205ENST00000466897 NKRFO15226 690 aaKnown RBP eCLIP17.24■□□□□ 0.35
NPHP4-205ENST00000466897 CCNT1O60563 726 aaKnown RBP17.24■□□□□ 0.35
NPHP4-205ENST00000466897 TDP2O95551 362 aa17.24■□□□□ 0.35
NPHP4-205ENST00000466897 TTLL4Q14679 1199 aa17.24■□□□□ 0.35
NPHP4-205ENST00000466897 ATL3Q6DD88 541 aa17.24■□□□□ 0.35
NPHP4-205ENST00000466897 CCDC62Q6P9F0 684 aa17.24■□□□□ 0.35
NPHP4-205ENST00000466897 SENP7Q9BQF6 1050 aa17.24■□□□□ 0.35
NPHP4-205ENST00000466897 RTEL1Q9NZ71 1219 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms