RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 A0A1W2PQC6 194 aa6.05□□□□□ -1.44
CDC42BPA-211ENST00000466538 A0A1W2PQD8 194 aa6.05□□□□□ -1.44
CDC42BPA-211ENST00000466538 KIAA1324LA8MWY0 1029 aaPredicted RBP6.05□□□□□ -1.44
CDC42BPA-211ENST00000466538 CBX4O00257 560 aa6.05□□□□□ -1.44
CDC42BPA-211ENST00000466538 SPINK2P20155 84 aa6.05□□□□□ -1.44
CDC42BPA-211ENST00000466538 CD96P40200 585 aa6.05□□□□□ -1.44
CDC42BPA-211ENST00000466538 SART3Q15020 963 aaKnown RBP6.05□□□□□ -1.44
CDC42BPA-211ENST00000466538 CRY1Q16526 586 aa6.05□□□□□ -1.44
CDC42BPA-211ENST00000466538 MROH9Q5TGP6 573 aa6.05□□□□□ -1.44
CDC42BPA-211ENST00000466538 RNF219Q5W0B1 726 aaPredicted RBP6.05□□□□□ -1.44
CDC42BPA-211ENST00000466538 STRA8Q7Z7C7 330 aa6.05□□□□□ -1.44
CDC42BPA-211ENST00000466538 RIOX2Q8IUF8 465 aa6.05□□□□□ -1.44
CDC42BPA-211ENST00000466538 USP7Q93009 1102 aa6.05□□□□□ -1.44
CDC42BPA-211ENST00000466538 TRMT2BQ96GJ1 504 aaKnown RBP6.05□□□□□ -1.44
CDC42BPA-211ENST00000466538 JMJD8Q96S16 334 aa6.05□□□□□ -1.44
CDC42BPA-211ENST00000466538 TTC1Q99614 292 aa6.05□□□□□ -1.44
CDC42BPA-211ENST00000466538 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.05□□□□□ -1.44
CDC42BPA-211ENST00000466538 EBF1Q9UH73 591 aa6.05□□□□□ -1.44
CDC42BPA-211ENST00000466538 ACSL6Q9UKU0 697 aa6.05□□□□□ -1.44
CDC42BPA-211ENST00000466538 ZKSCAN5Q9Y2L8 839 aa6.05□□□□□ -1.44
CDC42BPA-211ENST00000466538 PHLDB1Q86UU1 1377 aa6.05□□□□□ -1.44
CDC42BPA-211ENST00000466538 CCDC66A2RUB6 948 aa6.04□□□□□ -1.44
CDC42BPA-211ENST00000466538 FITM1A5D6W6 292 aa6.04□□□□□ -1.44
CDC42BPA-211ENST00000466538 TRAF5O00463 557 aa6.04□□□□□ -1.44
CDC42BPA-211ENST00000466538 NRDCO43847 1150 aa6.04□□□□□ -1.44
CDC42BPA-211ENST00000466538 MED26O95402 600 aa6.04□□□□□ -1.44
CDC42BPA-211ENST00000466538 PDGFRBP09619 1106 aa6.04□□□□□ -1.44
CDC42BPA-211ENST00000466538 BPIP17213 487 aa6.04□□□□□ -1.44
CDC42BPA-211ENST00000466538 FUT4P22083 530 aa6.04□□□□□ -1.44
CDC42BPA-211ENST00000466538 SPIRE1Q08AE8 756 aa6.04□□□□□ -1.44
CDC42BPA-211ENST00000466538 STRN3Q13033 797 aa6.04□□□□□ -1.44
CDC42BPA-211ENST00000466538 SNX17Q15036 470 aa6.04□□□□□ -1.44
CDC42BPA-211ENST00000466538 SEPT7Q16181 437 aaKnown RBP6.04□□□□□ -1.44
CDC42BPA-211ENST00000466538 TMEM177Q53S58 311 aa6.04□□□□□ -1.44
CDC42BPA-211ENST00000466538 RALGPS1Q5JS13 557 aa6.04□□□□□ -1.44
CDC42BPA-211ENST00000466538 CEP128Q6ZU80 1094 aa6.04□□□□□ -1.44
CDC42BPA-211ENST00000466538 OVCH1Q7RTY7 1134 aa6.04□□□□□ -1.44
CDC42BPA-211ENST00000466538 FERMT3Q86UX7 667 aa6.04□□□□□ -1.44
CDC42BPA-211ENST00000466538 WFDC3Q8IUB2 231 aa6.04□□□□□ -1.44
CDC42BPA-211ENST00000466538 LZTR1Q8N653 840 aa6.04□□□□□ -1.44
CDC42BPA-211ENST00000466538 AGBL5Q8NDL9 886 aa6.04□□□□□ -1.44
CDC42BPA-211ENST00000466538 WDR66Q8TBY9 1149 aa6.04□□□□□ -1.44
CDC42BPA-211ENST00000466538 MTA3Q9BTC8 594 aa6.04□□□□□ -1.44
CDC42BPA-211ENST00000466538 FAM126AQ9BYI3 521 aaPredicted RBP6.04□□□□□ -1.44
CDC42BPA-211ENST00000466538 IFT22Q9H7X7 185 aa6.04□□□□□ -1.44
CDC42BPA-211ENST00000466538 PDLIM7Q9NR12 457 aa6.04□□□□□ -1.44
CDC42BPA-211ENST00000466538 CATSPERZQ9NTU4 200 aa6.04□□□□□ -1.44
CDC42BPA-211ENST00000466538 B4GALT6Q9UBX8 382 aa6.04□□□□□ -1.44
CDC42BPA-211ENST00000466538 ANGEL1Q9UNK9 670 aaKnown RBP6.04□□□□□ -1.44
CDC42BPA-211ENST00000466538 COA3Q9Y2R0 106 aaPredicted RBP6.04□□□□□ -1.44
CDC42BPA-211ENST00000466538 COQ6Q9Y2Z9 468 aa6.04□□□□□ -1.44
CDC42BPA-211ENST00000466538 C22orf46C9J442 243 aa6.03□□□□□ -1.44
CDC42BPA-211ENST00000466538 M0R2C6 588 aa6.03□□□□□ -1.44
CDC42BPA-211ENST00000466538 GAS7O60861 476 aa6.03□□□□□ -1.44
CDC42BPA-211ENST00000466538 PPP1R11O60927 126 aaPredicted RBP6.03□□□□□ -1.44
CDC42BPA-211ENST00000466538 DGKIO75912 1065 aa6.03□□□□□ -1.44
CDC42BPA-211ENST00000466538 GLRX3O76003 335 aaKnown RBP6.03□□□□□ -1.44
CDC42BPA-211ENST00000466538 GDNFP39905 211 aa6.03□□□□□ -1.44
CDC42BPA-211ENST00000466538 CDKN1CP49918 316 aaPredicted RBP6.03□□□□□ -1.44
CDC42BPA-211ENST00000466538 DNM2P50570 870 aa6.03□□□□□ -1.44
CDC42BPA-211ENST00000466538 MECP2P51608 486 aaKnown RBP6.03□□□□□ -1.44
CDC42BPA-211ENST00000466538 EXOSC10Q01780 885 aaKnown RBP6.03□□□□□ -1.44
CDC42BPA-211ENST00000466538 OCRLQ01968 901 aa6.03□□□□□ -1.44
CDC42BPA-211ENST00000466538 HSF5Q4G112 596 aaPredicted RBP6.03□□□□□ -1.44
CDC42BPA-211ENST00000466538 NECAB2Q7Z6G3 386 aa6.03□□□□□ -1.44
CDC42BPA-211ENST00000466538 NLRP10Q86W26 655 aa6.03□□□□□ -1.44
CDC42BPA-211ENST00000466538 LILRA2Q8N149 483 aa6.03□□□□□ -1.44
CDC42BPA-211ENST00000466538 C2orf69Q8N8R5 385 aa6.03□□□□□ -1.44
CDC42BPA-211ENST00000466538 CHST14Q8NCH0 376 aa6.03□□□□□ -1.44
CDC42BPA-211ENST00000466538 FLCNQ8NFG4 579 aa6.03□□□□□ -1.44
CDC42BPA-211ENST00000466538 PI4K2BQ8TCG2 481 aa6.03□□□□□ -1.44
CDC42BPA-211ENST00000466538 PLEKHO2Q8TD55 490 aa6.03□□□□□ -1.44
CDC42BPA-211ENST00000466538 STAG1Q8WVM7 1258 aa6.03□□□□□ -1.44
CDC42BPA-211ENST00000466538 SCYL1Q96KG9 808 aa6.03□□□□□ -1.44
CDC42BPA-211ENST00000466538 CEP89Q96ST8 783 aa6.03□□□□□ -1.44
CDC42BPA-211ENST00000466538 EPB41L1Q9H4G0 881 aa6.03□□□□□ -1.44
CDC42BPA-211ENST00000466538 MARCH2Q9P0N8 246 aa6.03□□□□□ -1.44
CDC42BPA-211ENST00000466538 GULP1Q9UBP9 304 aa6.03□□□□□ -1.44
CDC42BPA-211ENST00000466538 NUB1Q9Y5A7 615 aa6.03□□□□□ -1.44
CDC42BPA-211ENST00000466538 TAF6LQ9Y6J9 622 aa6.03□□□□□ -1.44
CDC42BPA-211ENST00000466538 WASHC2CQ9Y4E1 1318 aa6.02□□□□□ -1.45
CDC42BPA-211ENST00000466538 GPR39O43194 453 aa6.02□□□□□ -1.45
CDC42BPA-211ENST00000466538 WNT11O96014 354 aa6.02□□□□□ -1.45
CDC42BPA-211ENST00000466538 HPXP02790 462 aa6.02□□□□□ -1.45
CDC42BPA-211ENST00000466538 FUCA1P04066 466 aa6.02□□□□□ -1.45
CDC42BPA-211ENST00000466538 PYGMP11217 842 aa6.02□□□□□ -1.45
CDC42BPA-211ENST00000466538 SSTR4P31391 388 aa6.02□□□□□ -1.45
CDC42BPA-211ENST00000466538 DSG1Q02413 1049 aa6.02□□□□□ -1.45
CDC42BPA-211ENST00000466538 FAPQ12884 760 aa6.02□□□□□ -1.45
CDC42BPA-211ENST00000466538 GPR19Q15760 415 aa6.02□□□□□ -1.45
CDC42BPA-211ENST00000466538 HABP4Q5JVS0 413 aaKnown RBP6.02□□□□□ -1.45
CDC42BPA-211ENST00000466538 ZNF574Q6ZN55 896 aaPredicted RBP6.02□□□□□ -1.45
CDC42BPA-211ENST00000466538 OTOP1Q7RTM1 612 aa6.02□□□□□ -1.45
CDC42BPA-211ENST00000466538 OTOP3Q7RTS5 596 aa6.02□□□□□ -1.45
CDC42BPA-211ENST00000466538 TEX2Q8IWB9 1127 aa6.02□□□□□ -1.45
CDC42BPA-211ENST00000466538 SMC1BQ8NDV3 1235 aa6.02□□□□□ -1.45
CDC42BPA-211ENST00000466538 USP33Q8TEY7 942 aa6.02□□□□□ -1.45
CDC42BPA-211ENST00000466538 JAM3Q9BX67 310 aa6.02□□□□□ -1.45
CDC42BPA-211ENST00000466538 IRF2BPLQ9H1B7 796 aa6.02□□□□□ -1.45
CDC42BPA-211ENST00000466538 PAK6Q9NQU5 681 aaPredicted RBP6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms