RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.49■□□□□ 0.39
HMGXB4-206ENST00000466438 TLR9Q9NR96 1032 aa17.49■□□□□ 0.39
HMGXB4-206ENST00000466438 CD207Q9UJ71 328 aa17.49■□□□□ 0.39
HMGXB4-206ENST00000466438 MYO7AQ13402 2215 aa17.48■□□□□ 0.39
HMGXB4-206ENST00000466438 RALGAPA2Q2PPJ7 1873 aa17.48■□□□□ 0.39
HMGXB4-206ENST00000466438 NLRC5Q86WI3 1866 aa17.48■□□□□ 0.39
HMGXB4-206ENST00000466438 PLA2G6O60733 806 aa17.48■□□□□ 0.39
HMGXB4-206ENST00000466438 BAATQ14032 418 aaPredicted RBP17.48■□□□□ 0.39
HMGXB4-206ENST00000466438 MBTPS1Q14703 1052 aa17.48■□□□□ 0.39
HMGXB4-206ENST00000466438 STK11IPQ8N1F8 1099 aa17.48■□□□□ 0.39
HMGXB4-206ENST00000466438 CLUAP1Q96AJ1 413 aa17.48■□□□□ 0.39
HMGXB4-206ENST00000466438 GMCL1Q96IK5 515 aa17.48■□□□□ 0.39
HMGXB4-206ENST00000466438 C1orf115Q9H7X2 142 aa17.48■□□□□ 0.39
HMGXB4-206ENST00000466438 GTF2IRD1Q9UHL9 959 aa17.48■□□□□ 0.39
HMGXB4-206ENST00000466438 CCPG1Q9ULG6 757 aa17.48■□□□□ 0.39
HMGXB4-206ENST00000466438 TRPC6Q9Y210 931 aa17.48■□□□□ 0.39
HMGXB4-206ENST00000466438 ATG2AQ2TAZ0 1938 aa17.48■□□□□ 0.39
HMGXB4-206ENST00000466438 DMDP11532 3685 aa17.48■□□□□ 0.39
HMGXB4-206ENST00000466438 LOC730098B7Z3J9 87 aa17.47■□□□□ 0.39
HMGXB4-206ENST00000466438 UBE3CQ15386 1083 aa17.47■□□□□ 0.39
HMGXB4-206ENST00000466438 ASIC4Q96FT7 647 aa17.47■□□□□ 0.39
HMGXB4-206ENST00000466438 LMAN2LQ9H0V9 348 aa17.47■□□□□ 0.39
HMGXB4-206ENST00000466438 PAG1Q9NWQ8 432 aa17.47■□□□□ 0.39
HMGXB4-206ENST00000466438 RCAN3Q9UKA8 241 aa17.47■□□□□ 0.39
HMGXB4-206ENST00000466438 EMSYQ7Z589 1322 aa17.47■□□□□ 0.39
HMGXB4-206ENST00000466438 TXNP10599 105 aaKnown RBP17.46■□□□□ 0.39
HMGXB4-206ENST00000466438 SLC1A4P43007 532 aa17.46■□□□□ 0.39
HMGXB4-206ENST00000466438 SNAP25P60880 206 aa17.46■□□□□ 0.39
HMGXB4-206ENST00000466438 PTK7Q13308 1070 aa17.46■□□□□ 0.39
HMGXB4-206ENST00000466438 CBX2Q14781 532 aaPredicted RBP17.46■□□□□ 0.39
HMGXB4-206ENST00000466438 TRIM71Q2Q1W2 868 aaKnown RBP17.46■□□□□ 0.39
HMGXB4-206ENST00000466438 ZNF618Q5T7W0 954 aa17.46■□□□□ 0.39
HMGXB4-206ENST00000466438 ZNF444Q8N0Y2 327 aaPredicted RBP17.46■□□□□ 0.39
HMGXB4-206ENST00000466438 TMEM57Q8N5G2 664 aa17.46■□□□□ 0.39
HMGXB4-206ENST00000466438 DBF4BQ8NFT6 615 aa17.46■□□□□ 0.39
HMGXB4-206ENST00000466438 IL1RAPL2Q9NP60 686 aa17.46■□□□□ 0.39
HMGXB4-206ENST00000466438 EXOC6BQ9Y2D4 811 aa17.46■□□□□ 0.39
HMGXB4-206ENST00000466438 CACNA1BQ00975 2339 aa17.46■□□□□ 0.38
HMGXB4-206ENST00000466438 PLIN4Q96Q06 1357 aa17.45■□□□□ 0.38
HMGXB4-206ENST00000466438 EYA4O95677 639 aa17.45■□□□□ 0.38
HMGXB4-206ENST00000466438 CHGBP05060 677 aa17.45■□□□□ 0.38
HMGXB4-206ENST00000466438 ICAM1P05362 532 aa17.45■□□□□ 0.38
HMGXB4-206ENST00000466438 MMP3P08254 477 aa17.45■□□□□ 0.38
HMGXB4-206ENST00000466438 NBL1P41271 181 aa17.45■□□□□ 0.38
HMGXB4-206ENST00000466438 PDE4BQ07343 736 aa17.45■□□□□ 0.38
HMGXB4-206ENST00000466438 PDE4DQ08499 809 aa17.45■□□□□ 0.38
HMGXB4-206ENST00000466438 KAT2BQ92831 832 aa17.45■□□□□ 0.38
HMGXB4-206ENST00000466438 FRAT1Q92837 279 aaPredicted RBP17.45■□□□□ 0.38
HMGXB4-206ENST00000466438 TOP1MTQ969P6 601 aa17.45■□□□□ 0.38
HMGXB4-206ENST00000466438 MPHOSPH6Q99547 160 aaKnown RBP17.45■□□□□ 0.38
HMGXB4-206ENST00000466438 ZNF287Q9HBT7 754 aa17.45■□□□□ 0.38
HMGXB4-206ENST00000466438 PRR12Q9ULL5 1215 aa17.45■□□□□ 0.38
HMGXB4-206ENST00000466438 SUPT16HQ9Y5B9 1047 aaKnown RBP17.45■□□□□ 0.38
HMGXB4-206ENST00000466438 MINDY4BA8MYZ0 360 aa17.44■□□□□ 0.38
HMGXB4-206ENST00000466438 C5orf67F2Z3F1 127 aa17.44■□□□□ 0.38
HMGXB4-206ENST00000466438 RBAK-RBAKDNI3L0D1 243 aa17.44■□□□□ 0.38
HMGXB4-206ENST00000466438 GALR2O43603 387 aaPredicted RBP17.44■□□□□ 0.38
HMGXB4-206ENST00000466438 EDNRBP24530 442 aa17.44■□□□□ 0.38
HMGXB4-206ENST00000466438 GIMAP6Q6P9H5 292 aa17.44■□□□□ 0.38
HMGXB4-206ENST00000466438 C7orf31Q8N865 590 aa17.44■□□□□ 0.38
HMGXB4-206ENST00000466438 AFG1LQ8WV93 481 aa17.44■□□□□ 0.38
HMGXB4-206ENST00000466438 MSLNLQ96KJ4 702 aa17.44■□□□□ 0.38
HMGXB4-206ENST00000466438 C11orf84Q9BUA3 381 aaPredicted RBP17.44■□□□□ 0.38
HMGXB4-206ENST00000466438 PUS7LQ9H0K6 701 aaKnown RBP17.44■□□□□ 0.38
HMGXB4-206ENST00000466438 HDAC6Q9UBN7 1215 aa17.44■□□□□ 0.38
HMGXB4-206ENST00000466438 VPS13AQ96RL7 3174 aa17.43■□□□□ 0.38
HMGXB4-206ENST00000466438 PTPDC1A2A3K4 754 aa17.43■□□□□ 0.38
HMGXB4-206ENST00000466438 NFIBO00712 420 aa17.43■□□□□ 0.38
HMGXB4-206ENST00000466438 LINC01565O15544 149 aa17.43■□□□□ 0.38
HMGXB4-206ENST00000466438 KDM4AO75164 1064 aa17.43■□□□□ 0.38
HMGXB4-206ENST00000466438 RB1P06400 928 aa17.43■□□□□ 0.38
HMGXB4-206ENST00000466438 MCCP23508 829 aa17.43■□□□□ 0.38
HMGXB4-206ENST00000466438 CTNNB1P35222 781 aa17.43■□□□□ 0.38
HMGXB4-206ENST00000466438 GTF2F1P35269 517 aaKnown RBP eCLIP17.43■□□□□ 0.38
HMGXB4-206ENST00000466438 ADAM15Q13444 863 aa17.43■□□□□ 0.38
HMGXB4-206ENST00000466438 KCTD1Q719H9 257 aa17.43■□□□□ 0.38
HMGXB4-206ENST00000466438 WNT8BQ93098 351 aa17.43■□□□□ 0.38
HMGXB4-206ENST00000466438 MYH7P12883 1935 aa17.43■□□□□ 0.38
HMGXB4-206ENST00000466438 GRM6O15303 877 aa17.42■□□□□ 0.38
HMGXB4-206ENST00000466438 PRDM1O75626 825 aa17.42■□□□□ 0.38
HMGXB4-206ENST00000466438 ARIH2O95376 493 aa17.42■□□□□ 0.38
HMGXB4-206ENST00000466438 CASTP20810 708 aaKnown RBP17.42■□□□□ 0.38
HMGXB4-206ENST00000466438 NDUFV1P49821 464 aa17.42■□□□□ 0.38
HMGXB4-206ENST00000466438 PLEKHG4Q58EX7 1191 aa17.42■□□□□ 0.38
HMGXB4-206ENST00000466438 RCSD1Q6JBY9 416 aa17.42■□□□□ 0.38
HMGXB4-206ENST00000466438 SLC30A10Q6XR72 485 aa17.42■□□□□ 0.38
HMGXB4-206ENST00000466438 CLASRPQ8N2M8 674 aaKnown RBP17.42■□□□□ 0.38
HMGXB4-206ENST00000466438 SMRP1Q8NCR6 262 aa17.42■□□□□ 0.38
HMGXB4-206ENST00000466438 NEDD1Q8NHV4 660 aa17.42■□□□□ 0.38
HMGXB4-206ENST00000466438 RHPN1Q8TCX5 695 aa17.42■□□□□ 0.38
HMGXB4-206ENST00000466438 IGFLR1Q9H665 355 aa17.42■□□□□ 0.38
HMGXB4-206ENST00000466438 GVINP1Q7Z2Y8 2422 aa17.42■□□□□ 0.38
HMGXB4-206ENST00000466438 GSG1L2A8MUP6 293 aa17.41■□□□□ 0.38
HMGXB4-206ENST00000466438 UPP2O95045 317 aa17.41■□□□□ 0.38
HMGXB4-206ENST00000466438 CALML3P27482 149 aa17.41■□□□□ 0.38
HMGXB4-206ENST00000466438 CHMP4CQ96CF2 233 aa17.41■□□□□ 0.38
HMGXB4-206ENST00000466438 STRBPQ96SI9 672 aaKnown RBP17.41■□□□□ 0.38
HMGXB4-206ENST00000466438 KATNAL1Q9BW62 490 aa17.41■□□□□ 0.38
HMGXB4-206ENST00000466438 BOLA2Q9H3K6 86 aa17.41■□□□□ 0.38
HMGXB4-206ENST00000466438 RWDD3Q9Y3V2 267 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms