RNA–Protein interactions for RNA: ENST00000465756.5

NPHP3-203, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 3,852 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-203ENST00000465756 RBBP6Q7Z6E9 1792 aaKnown RBP12.3□□□□□ -0.44
NPHP3-203ENST00000465756 ACLYP53396 1101 aa12.3□□□□□ -0.44
NPHP3-203ENST00000465756 BFSP2Q13515 415 aa12.3□□□□□ -0.44
NPHP3-203ENST00000465756 ADCK5Q3MIX3 580 aa12.3□□□□□ -0.44
NPHP3-203ENST00000465756 PRDM5Q9NQX1 630 aaPredicted RBP12.3□□□□□ -0.44
NPHP3-203ENST00000465756 LIMCH1Q9UPQ0 1083 aa12.3□□□□□ -0.44
NPHP3-203ENST00000465756 CNTNAP5Q8WYK1 1306 aa12.29□□□□□ -0.44
NPHP3-203ENST00000465756 DOCK3Q8IZD9 2030 aa12.29□□□□□ -0.44
NPHP3-203ENST00000465756 RBM47A0AV96 593 aaKnown RBP12.29□□□□□ -0.44
NPHP3-203ENST00000465756 PCNX4Q63HM2 1172 aa12.29□□□□□ -0.44
NPHP3-203ENST00000465756 RAB11FIP4Q86YS3 637 aa12.29□□□□□ -0.44
NPHP3-203ENST00000465756 BAG4O95429 457 aaKnown RBP12.29□□□□□ -0.44
NPHP3-203ENST00000465756 RAG1P15918 1043 aa12.29□□□□□ -0.44
NPHP3-203ENST00000465756 EDNRBP24530 442 aa12.29□□□□□ -0.44
NPHP3-203ENST00000465756 FAM160B1Q5W0V3 765 aa12.29□□□□□ -0.44
NPHP3-203ENST00000465756 RSPH3Q86UC2 560 aa12.29□□□□□ -0.44
NPHP3-203ENST00000465756 AGXT2Q9BYV1 514 aa12.29□□□□□ -0.44
NPHP3-203ENST00000465756 PGK1P00558 417 aa12.29□□□□□ -0.44
NPHP3-203ENST00000465756 CCT2P78371 535 aaKnown RBP12.29□□□□□ -0.44
NPHP3-203ENST00000465756 LHX8Q68G74 356 aa12.29□□□□□ -0.44
NPHP3-203ENST00000465756 SKAP1Q86WV1 359 aa12.29□□□□□ -0.44
NPHP3-203ENST00000465756 TOX2Q96NM4 488 aa12.29□□□□□ -0.44
NPHP3-203ENST00000465756 TMEM39AQ9NV64 488 aa12.29□□□□□ -0.44
NPHP3-203ENST00000465756 ORC3Q9UBD5 711 aaPredicted RBP12.29□□□□□ -0.44
NPHP3-203ENST00000465756 NOL7Q9UMY1 257 aaKnown RBP12.29□□□□□ -0.44
NPHP3-203ENST00000465756 PCDHA6Q9UN73 950 aa12.29□□□□□ -0.44
NPHP3-203ENST00000465756 PCDHA8Q9Y5H6 950 aa12.29□□□□□ -0.44
NPHP3-203ENST00000465756 SYNRGQ9UMZ2 1314 aa12.28□□□□□ -0.44
NPHP3-203ENST00000465756 NID2Q14112 1375 aa12.28□□□□□ -0.44
NPHP3-203ENST00000465756 A0A1W2PPC1 479 aa12.28□□□□□ -0.44
NPHP3-203ENST00000465756 PDIA3P30101 505 aaKnown RBP12.28□□□□□ -0.44
NPHP3-203ENST00000465756 EVCP57679 992 aa12.28□□□□□ -0.44
NPHP3-203ENST00000465756 GLIPR1L2Q4G1C9 344 aa12.28□□□□□ -0.44
NPHP3-203ENST00000465756 FAM43BQ6ZT52 329 aaPredicted RBP12.28□□□□□ -0.44
NPHP3-203ENST00000465756 LLPHQ9BRT6 129 aaKnown RBP12.28□□□□□ -0.44
NPHP3-203ENST00000465756 ANO3Q9BYT9 981 aa12.28□□□□□ -0.44
NPHP3-203ENST00000465756 PFKFB2O60825 505 aa12.28□□□□□ -0.44
NPHP3-203ENST00000465756 ACTN1P12814 892 aa12.28□□□□□ -0.44
NPHP3-203ENST00000465756 HOXA13P31271 388 aaPredicted RBP12.28□□□□□ -0.44
NPHP3-203ENST00000465756 ANO1Q5XXA6 986 aa12.28□□□□□ -0.44
NPHP3-203ENST00000465756 NIPA1Q7RTP0 329 aa12.28□□□□□ -0.44
NPHP3-203ENST00000465756 VSIG10LQ86VR7 867 aa12.28□□□□□ -0.44
NPHP3-203ENST00000465756 TMEM199Q8N511 208 aa12.28□□□□□ -0.44
NPHP3-203ENST00000465756 COL11A1P12107 1806 aaPredicted RBP12.28□□□□□ -0.44
NPHP3-203ENST00000465756 ATN1P54259 1190 aaPredicted RBP12.28□□□□□ -0.44
NPHP3-203ENST00000465756 PPIGQ13427 754 aaKnown RBP eCLIP12.28□□□□□ -0.443e-7■■■■□ 26
NPHP3-203ENST00000465756 PGM5Q15124 567 aa12.28□□□□□ -0.44
NPHP3-203ENST00000465756 C1orf53Q5VUE5 145 aa12.28□□□□□ -0.44
NPHP3-203ENST00000465756 STK3Q13188 491 aa12.27□□□□□ -0.44
NPHP3-203ENST00000465756 KCNA10Q16322 511 aa12.27□□□□□ -0.44
NPHP3-203ENST00000465756 SLC39A5Q6ZMH5 540 aa12.27□□□□□ -0.44
NPHP3-203ENST00000465756 RPUSD2Q8IZ73 545 aaKnown RBP12.27□□□□□ -0.44
NPHP3-203ENST00000465756 SHISA4Q96DD7 197 aa12.27□□□□□ -0.44
NPHP3-203ENST00000465756 SENP7Q9BQF6 1050 aa12.27□□□□□ -0.44
NPHP3-203ENST00000465756 RNF216Q9NWF9 866 aaPredicted RBP12.27□□□□□ -0.44
NPHP3-203ENST00000465756 CLTBP09497 229 aa12.27□□□□□ -0.45
NPHP3-203ENST00000465756 ODR4Q5SWX8 454 aa12.27□□□□□ -0.45
NPHP3-203ENST00000465756 POTEEQ6S8J3 1075 aa12.27□□□□□ -0.45
NPHP3-203ENST00000465756 PKNOX2Q96KN3 472 aa12.27□□□□□ -0.45
NPHP3-203ENST00000465756 SPATA33Q96N06 139 aa12.27□□□□□ -0.45
NPHP3-203ENST00000465756 BRPF3Q9ULD4 1205 aa12.27□□□□□ -0.45
NPHP3-203ENST00000465756 MYH6P13533 1939 aa12.27□□□□□ -0.45
NPHP3-203ENST00000465756 RLFQ13129 1914 aa12.27□□□□□ -0.45
NPHP3-203ENST00000465756 ARVCFO00192 962 aa12.27□□□□□ -0.45
NPHP3-203ENST00000465756 PPFIA4O75335 1185 aa12.27□□□□□ -0.45
NPHP3-203ENST00000465756 GGPS1O95749 300 aa12.27□□□□□ -0.45
NPHP3-203ENST00000465756 GCFC2P16383 781 aaKnown RBP12.27□□□□□ -0.45
NPHP3-203ENST00000465756 ICAM3P32942 547 aa12.27□□□□□ -0.45
NPHP3-203ENST00000465756 NONOQ15233 471 aaKnown RBP eCLIP12.27□□□□□ -0.45
NPHP3-203ENST00000465756 RASGRP2Q7LDG7 609 aa12.27□□□□□ -0.45
NPHP3-203ENST00000465756 C7orf31Q8N865 590 aa12.27□□□□□ -0.45
NPHP3-203ENST00000465756 TRPV1Q8NER1 839 aa12.27□□□□□ -0.45
NPHP3-203ENST00000465756 FERMT2Q96AC1 680 aa12.27□□□□□ -0.45
NPHP3-203ENST00000465756 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.27□□□□□ -0.45
NPHP3-203ENST00000465756 ASGR1P07306 291 aa12.26□□□□□ -0.45
NPHP3-203ENST00000465756 CAP1Q01518 475 aa12.26□□□□□ -0.45
NPHP3-203ENST00000465756 ZNFX1Q9P2E3 1918 aaKnown RBP12.26□□□□□ -0.45
NPHP3-203ENST00000465756 PARP14Q460N5 1801 aa12.26□□□□□ -0.45
NPHP3-203ENST00000465756 A0A1W2PQ45 241 aaPredicted RBP12.26□□□□□ -0.45
NPHP3-203ENST00000465756 A0A1W2PQY0 241 aa12.26□□□□□ -0.45
NPHP3-203ENST00000465756 HSP90AA1P07900 732 aaKnown RBP12.26□□□□□ -0.45
NPHP3-203ENST00000465756 PDIA4P13667 645 aaKnown RBP12.26□□□□□ -0.45
NPHP3-203ENST00000465756 NKX3-2P78367 333 aa12.26□□□□□ -0.45
NPHP3-203ENST00000465756 MTMR1Q13613 665 aa12.26□□□□□ -0.45
NPHP3-203ENST00000465756 WWC2Q6AWC2 1192 aa12.26□□□□□ -0.45
NPHP3-203ENST00000465756 KLHDC9Q8NEP7 349 aa12.26□□□□□ -0.45
NPHP3-203ENST00000465756 TBC1D22BQ9NU19 505 aa12.26□□□□□ -0.45
NPHP3-203ENST00000465756 ADD1P35611 737 aaKnown RBP12.26□□□□□ -0.45
NPHP3-203ENST00000465756 CHMP4BP1P59074 171 aa12.26□□□□□ -0.45
NPHP3-203ENST00000465756 METTL7BQ6UX53 244 aa12.26□□□□□ -0.45
NPHP3-203ENST00000465756 GPKOWQ92917 476 aaPredicted RBP eCLIP12.26□□□□□ -0.45
NPHP3-203ENST00000465756 M0QZ92 97 aa12.25□□□□□ -0.45
NPHP3-203ENST00000465756 SMPD1P17405 629 aa12.25□□□□□ -0.45
NPHP3-203ENST00000465756 PLA2G4DQ86XP0 818 aa12.25□□□□□ -0.45
NPHP3-203ENST00000465756 CCDC43Q96MW1 224 aaKnown RBP12.25□□□□□ -0.45
NPHP3-203ENST00000465756 SENP2Q9HC62 589 aa12.25□□□□□ -0.45
NPHP3-203ENST00000465756 TAF6LQ9Y6J9 622 aa12.25□□□□□ -0.45
NPHP3-203ENST00000465756 PLXNA1Q9UIW2 1896 aa12.25□□□□□ -0.45
NPHP3-203ENST00000465756 CYTH3O43739 400 aa12.25□□□□□ -0.45
NPHP3-203ENST00000465756 ADAMTS4O75173 837 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms