RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 LRP2BPQ9P2M1 347 aa8.48□□□□□ -1.05
SMC4-205ENST00000465563 SSBP05455 408 aaKnown RBP eCLIP8.47□□□□□ -1.05
SMC4-205ENST00000465563 CNR2P34972 360 aa8.47□□□□□ -1.05
SMC4-205ENST00000465563 SLC6A11P48066 632 aa8.47□□□□□ -1.05
SMC4-205ENST00000465563 MROH9Q5TGP6 573 aa8.47□□□□□ -1.05
SMC4-205ENST00000465563 LARP1BQ659C4 914 aaKnown RBP8.47□□□□□ -1.05
SMC4-205ENST00000465563 CD300LDQ6UXZ3 194 aa8.47□□□□□ -1.05
SMC4-205ENST00000465563 ZC3H18Q86VM9 953 aaKnown RBP8.47□□□□□ -1.05
SMC4-205ENST00000465563 MIB1Q86YT6 1006 aa8.47□□□□□ -1.05
SMC4-205ENST00000465563 RIOX2Q8IUF8 465 aa8.47□□□□□ -1.05
SMC4-205ENST00000465563 DIO2Q92813 273 aa8.47□□□□□ -1.05
SMC4-205ENST00000465563 BORCS6Q96GS4 357 aa8.47□□□□□ -1.05
SMC4-205ENST00000465563 C11orf84Q9BUA3 381 aaPredicted RBP8.47□□□□□ -1.05
SMC4-205ENST00000465563 DUSP10Q9Y6W6 482 aa8.47□□□□□ -1.05
SMC4-205ENST00000465563 K7ESM1 405 aa8.46□□□□□ -1.06
SMC4-205ENST00000465563 MYO1BO43795 1136 aa8.46□□□□□ -1.06
SMC4-205ENST00000465563 ITGAVP06756 1048 aa8.46□□□□□ -1.06
SMC4-205ENST00000465563 SNRPB2P08579 225 aaKnown RBP8.46□□□□□ -1.06
SMC4-205ENST00000465563 FPR2P25090 351 aa8.46□□□□□ -1.06
SMC4-205ENST00000465563 ECI1P42126 302 aa8.46□□□□□ -1.06
SMC4-205ENST00000465563 GTF2A2P52657 109 aa8.46□□□□□ -1.06
SMC4-205ENST00000465563 CEP68Q76N32 757 aa8.46□□□□□ -1.06
SMC4-205ENST00000465563 MILR1Q7Z6M3 343 aa8.46□□□□□ -1.06
SMC4-205ENST00000465563 ZNF227Q86WZ6 799 aa8.46□□□□□ -1.06
SMC4-205ENST00000465563 KYQ8NBH2 561 aa8.46□□□□□ -1.06
SMC4-205ENST00000465563 ADAMTS17Q8TE56 1095 aa8.46□□□□□ -1.06
SMC4-205ENST00000465563 TRMT2BQ96GJ1 504 aaKnown RBP8.46□□□□□ -1.06
SMC4-205ENST00000465563 PALD1Q9ULE6 856 aa8.46□□□□□ -1.06
SMC4-205ENST00000465563 MEFVO15553 781 aaPredicted RBP8.45□□□□□ -1.06
SMC4-205ENST00000465563 TBX1O43435 398 aa8.45□□□□□ -1.06
SMC4-205ENST00000465563 THBS2P35442 1172 aa8.45□□□□□ -1.06
SMC4-205ENST00000465563 KCNAB2Q13303 367 aa8.45□□□□□ -1.06
SMC4-205ENST00000465563 Q8N1Y9 231 aa8.45□□□□□ -1.06
SMC4-205ENST00000465563 FAM26EQ8N5C1 309 aa8.45□□□□□ -1.06
SMC4-205ENST00000465563 CCDC140Q96MF4 163 aa8.45□□□□□ -1.06
SMC4-205ENST00000465563 TMEFF2Q9UIK5 374 aaPredicted RBP8.45□□□□□ -1.06
SMC4-205ENST00000465563 X6R8D5 127 aa8.45□□□□□ -1.06
SMC4-205ENST00000465563 SUSD5O60279 629 aa8.44□□□□□ -1.06
SMC4-205ENST00000465563 DDAH1O94760 285 aa8.44□□□□□ -1.06
SMC4-205ENST00000465563 CPP00450 1065 aa8.44□□□□□ -1.06
SMC4-205ENST00000465563 SCG5P05408 212 aa8.44□□□□□ -1.06
SMC4-205ENST00000465563 RPL13P26373 211 aaKnown RBP8.44□□□□□ -1.06
SMC4-205ENST00000465563 ERCC5P28715 1186 aaPredicted RBP8.44□□□□□ -1.06
SMC4-205ENST00000465563 BCL6P41182 706 aa8.44□□□□□ -1.06
SMC4-205ENST00000465563 CCDC103Q8IW40 242 aa8.44□□□□□ -1.06
SMC4-205ENST00000465563 TTLL6Q8N841 843 aa8.44□□□□□ -1.06
SMC4-205ENST00000465563 SYT3Q9BQG1 590 aa8.44□□□□□ -1.06
SMC4-205ENST00000465563 NGRNQ9NPE2 291 aaKnown RBP8.44□□□□□ -1.06
SMC4-205ENST00000465563 PRKAG3Q9UGI9 489 aa8.44□□□□□ -1.06
SMC4-205ENST00000465563 B2RBV5 119 aa8.43□□□□□ -1.06
SMC4-205ENST00000465563 KCNJ6P48051 423 aa8.43□□□□□ -1.06
SMC4-205ENST00000465563 FXNQ16595 210 aa8.43□□□□□ -1.06
SMC4-205ENST00000465563 GGNQ86UU5 652 aa8.43□□□□□ -1.06
SMC4-205ENST00000465563 FAM126BQ8IXS8 530 aa8.43□□□□□ -1.06
SMC4-205ENST00000465563 TMEM169Q96HH4 297 aa8.43□□□□□ -1.06
SMC4-205ENST00000465563 COA3Q9Y2R0 106 aaPredicted RBP8.43□□□□□ -1.06
SMC4-205ENST00000465563 ARNTLO00327 626 aa8.42□□□□□ -1.06
SMC4-205ENST00000465563 GNL2Q13823 731 aaKnown RBP8.42□□□□□ -1.06
SMC4-205ENST00000465563 ACBD5Q5T8D3 534 aaPredicted RBP8.42□□□□□ -1.06
SMC4-205ENST00000465563 HHIPL2Q6UWX4 724 aa8.42□□□□□ -1.06
SMC4-205ENST00000465563 NLRP10Q86W26 655 aa8.42□□□□□ -1.06
SMC4-205ENST00000465563 KREMEN2Q8NCW0 462 aa8.42□□□□□ -1.06
SMC4-205ENST00000465563 YIPF4Q9BSR8 244 aa8.42□□□□□ -1.06
SMC4-205ENST00000465563 LTBRP36941 435 aa8.41□□□□□ -1.06
SMC4-205ENST00000465563 ITGA1P56199 1179 aa8.41□□□□□ -1.06
SMC4-205ENST00000465563 KIAA2012Q0VF49 1180 aa8.41□□□□□ -1.06
SMC4-205ENST00000465563 TESK1Q15569 626 aa8.41□□□□□ -1.06
SMC4-205ENST00000465563 SF1Q15637 639 aaKnown RBP8.41□□□□□ -1.06
SMC4-205ENST00000465563 CHRNA2Q15822 529 aa8.41□□□□□ -1.06
SMC4-205ENST00000465563 ZNF827Q17R98 1081 aa8.41□□□□□ -1.06
SMC4-205ENST00000465563 RGL3Q3MIN7 710 aa8.41□□□□□ -1.06
SMC4-205ENST00000465563 STK32CQ86UX6 486 aa8.41□□□□□ -1.06
SMC4-205ENST00000465563 PPIL6Q8IXY8 311 aa8.41□□□□□ -1.06
SMC4-205ENST00000465563 RCBTB1Q8NDN9 531 aa8.41□□□□□ -1.06
SMC4-205ENST00000465563 ITGB3P05106 788 aa8.4□□□□□ -1.06
SMC4-205ENST00000465563 ETFBP38117 255 aa8.4□□□□□ -1.06
SMC4-205ENST00000465563 STAT5AP42229 794 aa8.4□□□□□ -1.06
SMC4-205ENST00000465563 PRSS53Q2L4Q9 553 aa8.4□□□□□ -1.06
SMC4-205ENST00000465563 ZXDCQ2QGD7 858 aaPredicted RBP8.4□□□□□ -1.06
SMC4-205ENST00000465563 FAM26FQ5R3K3 315 aa8.4□□□□□ -1.06
SMC4-205ENST00000465563 CHAMP1Q96JM3 812 aa8.4□□□□□ -1.06
SMC4-205ENST00000465563 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.4□□□□□ -1.06
SMC4-205ENST00000465563 PCDHA2Q9Y5H9 948 aa8.4□□□□□ -1.06
SMC4-205ENST00000465563 H7BY64 318 aa8.39□□□□□ -1.07
SMC4-205ENST00000465563 HGSO14964 777 aaPredicted RBP8.39□□□□□ -1.07
SMC4-205ENST00000465563 GFRA1P56159 465 aa8.39□□□□□ -1.07
SMC4-205ENST00000465563 NKX3-2P78367 333 aa8.39□□□□□ -1.07
SMC4-205ENST00000465563 LSAMPQ13449 338 aa8.39□□□□□ -1.07
SMC4-205ENST00000465563 MRM1Q6IN84 353 aaKnown RBP8.39□□□□□ -1.07
SMC4-205ENST00000465563 FAM124AQ86V42 546 aa8.39□□□□□ -1.07
SMC4-205ENST00000465563 MICAL1Q8TDZ2 1067 aa8.39□□□□□ -1.07
SMC4-205ENST00000465563 FBXL7Q9UJT9 491 aa8.39□□□□□ -1.07
SMC4-205ENST00000465563 ZNF652Q9Y2D9 606 aa8.39□□□□□ -1.07
SMC4-205ENST00000465563 CR1LQ2VPA4 569 aa8.38□□□□□ -1.07
SMC4-205ENST00000465563 MCTP2Q6DN12 878 aa8.38□□□□□ -1.07
SMC4-205ENST00000465563 EEPD1Q7L9B9 569 aa8.38□□□□□ -1.07
SMC4-205ENST00000465563 TMEM145Q8NBT3 493 aa8.38□□□□□ -1.07
SMC4-205ENST00000465563 GPR20Q99678 358 aa8.38□□□□□ -1.07
SMC4-205ENST00000465563 MROH6A6NGR9 719 aa8.37□□□□□ -1.07
SMC4-205ENST00000465563 AGRPO00253 132 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms