RNA–Protein interactions for RNA: ENST00000465505.2

SNX4-202, Transcript of sorting nexin 4, humanhuman

TSL 5

Gene SNX4, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-202ENST00000465505 C22orf46C9J442 243 aa4.73□□□□□ -1.65
SNX4-202ENST00000465505 CYP2C8P10632 490 aa4.73□□□□□ -1.65
SNX4-202ENST00000465505 NAT2P11245 290 aa4.73□□□□□ -1.65
SNX4-202ENST00000465505 CNR2P34972 360 aa4.73□□□□□ -1.65
SNX4-202ENST00000465505 IQCEQ6IPM2 695 aa4.73□□□□□ -1.65
SNX4-202ENST00000465505 ETV3LQ6ZN32 361 aa4.73□□□□□ -1.65
SNX4-202ENST00000465505 DCP2Q8IU60 420 aaKnown RBP4.73□□□□□ -1.65
SNX4-202ENST00000465505 CCDC103Q8IW40 242 aa4.73□□□□□ -1.65
SNX4-202ENST00000465505 FAM26EQ8N5C1 309 aa4.73□□□□□ -1.65
SNX4-202ENST00000465505 RBM15Q96T37 977 aaKnown RBP eCLIP4.73□□□□□ -1.65
SNX4-202ENST00000465505 PCDH18Q9HCL0 1135 aa4.73□□□□□ -1.65
SNX4-202ENST00000465505 TMEFF2Q9UIK5 374 aaPredicted RBP4.73□□□□□ -1.65
SNX4-202ENST00000465505 K7ESM1 405 aa4.72□□□□□ -1.65
SNX4-202ENST00000465505 SMARCA5O60264 1052 aaPredicted RBP4.72□□□□□ -1.65
SNX4-202ENST00000465505 ITGB3P05106 788 aa4.72□□□□□ -1.65
SNX4-202ENST00000465505 RPL13P26373 211 aaKnown RBP4.72□□□□□ -1.65
SNX4-202ENST00000465505 HOXC12P31275 282 aa4.72□□□□□ -1.65
SNX4-202ENST00000465505 GJA9P57773 515 aa4.72□□□□□ -1.65
SNX4-202ENST00000465505 ZXDCQ2QGD7 858 aaPredicted RBP4.72□□□□□ -1.65
SNX4-202ENST00000465505 CD300LDQ6UXZ3 194 aa4.72□□□□□ -1.65
SNX4-202ENST00000465505 CEP68Q76N32 757 aa4.72□□□□□ -1.65
SNX4-202ENST00000465505 RIOX2Q8IUF8 465 aa4.72□□□□□ -1.65
SNX4-202ENST00000465505 KYQ8NBH2 561 aa4.72□□□□□ -1.65
SNX4-202ENST00000465505 KREMEN2Q8NCW0 462 aa4.72□□□□□ -1.65
SNX4-202ENST00000465505 ADAMTS17Q8TE56 1095 aa4.72□□□□□ -1.65
SNX4-202ENST00000465505 SEC14L1Q92503 715 aa4.72□□□□□ -1.65
SNX4-202ENST00000465505 PPP1R14AQ96A00 147 aa4.72□□□□□ -1.65
SNX4-202ENST00000465505 AP5M1Q9H0R1 490 aa4.72□□□□□ -1.65
SNX4-202ENST00000465505 BTG4Q9NY30 223 aa4.72□□□□□ -1.65
SNX4-202ENST00000465505 TIMM13Q9Y5L4 95 aaPredicted RBP4.72□□□□□ -1.65
SNX4-202ENST00000465505 SMAD7O15105 426 aaKnown RBP4.71□□□□□ -1.66
SNX4-202ENST00000465505 TBX1O43435 398 aa4.71□□□□□ -1.66
SNX4-202ENST00000465505 SCG5P05408 212 aa4.71□□□□□ -1.66
SNX4-202ENST00000465505 ITGAVP06756 1048 aa4.71□□□□□ -1.66
SNX4-202ENST00000465505 FPR2P25090 351 aa4.71□□□□□ -1.66
SNX4-202ENST00000465505 THBS2P35442 1172 aa4.71□□□□□ -1.66
SNX4-202ENST00000465505 BCL6P41182 706 aa4.71□□□□□ -1.66
SNX4-202ENST00000465505 SLC6A11P48066 632 aa4.71□□□□□ -1.66
SNX4-202ENST00000465505 RPL11P62913 178 aaKnown RBP4.71□□□□□ -1.66
SNX4-202ENST00000465505 PRR31Q5SQ13 230 aa4.71□□□□□ -1.66
SNX4-202ENST00000465505 MROH9Q5TGP6 573 aa4.71□□□□□ -1.66
SNX4-202ENST00000465505 E4F1Q66K89 784 aaPredicted RBP4.71□□□□□ -1.66
SNX4-202ENST00000465505 C6orf15Q6UXA7 325 aaPredicted RBP4.71□□□□□ -1.66
SNX4-202ENST00000465505 MILR1Q7Z6M3 343 aa4.71□□□□□ -1.66
SNX4-202ENST00000465505 STK32CQ86UX6 486 aa4.71□□□□□ -1.66
SNX4-202ENST00000465505 DHX37Q8IY37 1157 aaKnown RBP4.71□□□□□ -1.66
SNX4-202ENST00000465505 Q8N1Y9 231 aa4.71□□□□□ -1.66
SNX4-202ENST00000465505 BTN2A2Q8WVV5 523 aa4.71□□□□□ -1.66
SNX4-202ENST00000465505 PALD1Q9ULE6 856 aa4.71□□□□□ -1.66
SNX4-202ENST00000465505 X6R8D5 127 aa4.71□□□□□ -1.66
SNX4-202ENST00000465505 INSRRP14616 1297 aa4.7□□□□□ -1.66
SNX4-202ENST00000465505 MAGEA10P43363 369 aaPredicted RBP4.7□□□□□ -1.66
SNX4-202ENST00000465505 ITGA1P56199 1179 aa4.7□□□□□ -1.66
SNX4-202ENST00000465505 TESK1Q15569 626 aa4.7□□□□□ -1.66
SNX4-202ENST00000465505 SF1Q15637 639 aaKnown RBP4.7□□□□□ -1.66
SNX4-202ENST00000465505 CR1LQ2VPA4 569 aa4.7□□□□□ -1.66
SNX4-202ENST00000465505 RGL3Q3MIN7 710 aa4.7□□□□□ -1.66
SNX4-202ENST00000465505 NLRP10Q86W26 655 aa4.7□□□□□ -1.66
SNX4-202ENST00000465505 FAM178BQ8IXR5 827 aa4.7□□□□□ -1.66
SNX4-202ENST00000465505 TTLL6Q8N841 843 aa4.7□□□□□ -1.66
SNX4-202ENST00000465505 DIO2Q92813 273 aa4.7□□□□□ -1.66
SNX4-202ENST00000465505 BORCS6Q96GS4 357 aa4.7□□□□□ -1.66
SNX4-202ENST00000465505 CCSER2Q9H7U1 834 aa4.7□□□□□ -1.66
SNX4-202ENST00000465505 MRVI1Q9Y6F6 885 aa4.7□□□□□ -1.66
SNX4-202ENST00000465505 CAPNS1P04632 268 aa4.69□□□□□ -1.66
SNX4-202ENST00000465505 ECI1P42126 302 aa4.69□□□□□ -1.66
SNX4-202ENST00000465505 GTF2A2P52657 109 aa4.69□□□□□ -1.66
SNX4-202ENST00000465505 KIAA2012Q0VF49 1180 aa4.69□□□□□ -1.66
SNX4-202ENST00000465505 ZNF827Q17R98 1081 aa4.69□□□□□ -1.66
SNX4-202ENST00000465505 SV2CQ496J9 727 aa4.69□□□□□ -1.66
SNX4-202ENST00000465505 TBC1D10BQ4KMP7 808 aaPredicted RBP4.69□□□□□ -1.66
SNX4-202ENST00000465505 FAM26FQ5R3K3 315 aa4.69□□□□□ -1.66
SNX4-202ENST00000465505 MCTP2Q6DN12 878 aa4.69□□□□□ -1.66
SNX4-202ENST00000465505 DENND5AQ6IQ26 1287 aa4.69□□□□□ -1.66
SNX4-202ENST00000465505 ZC3H18Q86VM9 953 aaKnown RBP4.69□□□□□ -1.66
SNX4-202ENST00000465505 ZNF227Q86WZ6 799 aa4.69□□□□□ -1.66
SNX4-202ENST00000465505 FAM126BQ8IXS8 530 aa4.69□□□□□ -1.66
SNX4-202ENST00000465505 RCBTB1Q8NDN9 531 aa4.69□□□□□ -1.66
SNX4-202ENST00000465505 TRMT2BQ96GJ1 504 aaKnown RBP4.69□□□□□ -1.66
SNX4-202ENST00000465505 TMEM169Q96HH4 297 aa4.69□□□□□ -1.66
SNX4-202ENST00000465505 CCDC140Q96MF4 163 aa4.69□□□□□ -1.66
SNX4-202ENST00000465505 MYRFQ9Y2G1 1151 aa4.69□□□□□ -1.66
SNX4-202ENST00000465505 MROH6A6NGR9 719 aa4.68□□□□□ -1.66
SNX4-202ENST00000465505 B2RBV5 119 aa4.68□□□□□ -1.66
SNX4-202ENST00000465505 DDX3XO00571 662 aaKnown RBP eCLIP4.68□□□□□ -1.66
SNX4-202ENST00000465505 SUSD5O60279 629 aa4.68□□□□□ -1.66
SNX4-202ENST00000465505 CPP00450 1065 aa4.68□□□□□ -1.66
SNX4-202ENST00000465505 PLATP00750 562 aa4.68□□□□□ -1.66
SNX4-202ENST00000465505 SNRPB2P08579 225 aaKnown RBP4.68□□□□□ -1.66
SNX4-202ENST00000465505 STAT5AP42229 794 aa4.68□□□□□ -1.66
SNX4-202ENST00000465505 ADAM17P78536 824 aa4.68□□□□□ -1.66
SNX4-202ENST00000465505 KCNAB2Q13303 367 aa4.68□□□□□ -1.66
SNX4-202ENST00000465505 ADAM9Q13443 819 aa4.68□□□□□ -1.66
SNX4-202ENST00000465505 PRSS53Q2L4Q9 553 aa4.68□□□□□ -1.66
SNX4-202ENST00000465505 ACBD5Q5T8D3 534 aaPredicted RBP4.68□□□□□ -1.66
SNX4-202ENST00000465505 KRTAP5-3Q6L8H2 238 aa4.68□□□□□ -1.66
SNX4-202ENST00000465505 TXNDC5Q8NBS9 432 aaKnown RBP4.68□□□□□ -1.66
SNX4-202ENST00000465505 MICAL1Q8TDZ2 1067 aa4.68□□□□□ -1.66
SNX4-202ENST00000465505 GPR20Q99678 358 aa4.68□□□□□ -1.66
SNX4-202ENST00000465505 NGRNQ9NPE2 291 aaKnown RBP4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms