RNA–Protein interactions for RNA: ENST00000465405.1

GABRE-205, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 1 (best)

Gene GABRE, Length 706 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-205ENST00000465405 C16orf59Q7L2K0 433 aa10.19□□□□□ -0.78
GABRE-205ENST00000465405 FCHSD1Q86WN1 690 aa10.19□□□□□ -0.78
GABRE-205ENST00000465405 SRBD1Q8N5C6 995 aaKnown RBP10.19□□□□□ -0.78
GABRE-205ENST00000465405 DEFB123Q8N688 67 aa10.19□□□□□ -0.78
GABRE-205ENST00000465405 IL31RAQ8NI17 732 aa10.19□□□□□ -0.78
GABRE-205ENST00000465405 CTCFLQ8NI51 663 aaPredicted RBP10.19□□□□□ -0.78
GABRE-205ENST00000465405 TCEANC2Q96MN5 208 aa10.19□□□□□ -0.78
GABRE-205ENST00000465405 MAP3K14Q99558 947 aa10.19□□□□□ -0.78
GABRE-205ENST00000465405 PDCD2LQ9BRP1 358 aa10.19□□□□□ -0.78
GABRE-205ENST00000465405 POLR3EQ9NVU0 708 aa10.19□□□□□ -0.78
GABRE-205ENST00000465405 hCG_1642624A0A1W2PR95 340 aa10.18□□□□□ -0.78
GABRE-205ENST00000465405 GCOM1H8Y6P7 765 aaPredicted RBP10.18□□□□□ -0.78
GABRE-205ENST00000465405 EIF3JO75822 258 aaKnown RBP10.18□□□□□ -0.78
GABRE-205ENST00000465405 RGS20O76081 388 aa10.18□□□□□ -0.78
GABRE-205ENST00000465405 POLR2MP0CAP2 368 aa10.18□□□□□ -0.78
GABRE-205ENST00000465405 CSF2RAP15509 400 aa10.18□□□□□ -0.78
GABRE-205ENST00000465405 ARHGAP1Q07960 439 aa10.18□□□□□ -0.78
GABRE-205ENST00000465405 PGM5Q15124 567 aa10.18□□□□□ -0.78
GABRE-205ENST00000465405 NBPF20Q3BBV1 942 aa10.18□□□□□ -0.78
GABRE-205ENST00000465405 RNF20Q5VTR2 975 aa10.18□□□□□ -0.78
GABRE-205ENST00000465405 GPR153Q6NV75 609 aa10.18□□□□□ -0.78
GABRE-205ENST00000465405 TMTC2Q8N394 836 aa10.18□□□□□ -0.78
GABRE-205ENST00000465405 AFG1LQ8WV93 481 aa10.18□□□□□ -0.78
GABRE-205ENST00000465405 NEK1Q96PY6 1258 aa10.18□□□□□ -0.78
GABRE-205ENST00000465405 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.18□□□□□ -0.781e-6■■■□□ 17.6
GABRE-205ENST00000465405 MTG1Q9BT17 334 aaPredicted RBP10.18□□□□□ -0.78
GABRE-205ENST00000465405 SPZ1Q9BXG8 430 aa10.18□□□□□ -0.78
GABRE-205ENST00000465405 MAP3K20Q9NYL2 800 aaKnown RBP10.18□□□□□ -0.78
GABRE-205ENST00000465405 DDX41Q9UJV9 622 aaKnown RBP10.18□□□□□ -0.78
GABRE-205ENST00000465405 SORBS3O60504 671 aa10.17□□□□□ -0.78
GABRE-205ENST00000465405 GH1P01241 217 aa10.17□□□□□ -0.78
GABRE-205ENST00000465405 ACRP10323 421 aa10.17□□□□□ -0.78
GABRE-205ENST00000465405 CYP2C9P11712 490 aa10.17□□□□□ -0.78
GABRE-205ENST00000465405 SMARCA1P28370 1054 aa10.17□□□□□ -0.78
GABRE-205ENST00000465405 KIF5BP33176 963 aa10.17□□□□□ -0.78
GABRE-205ENST00000465405 CCL23P55773 120 aa10.17□□□□□ -0.78
GABRE-205ENST00000465405 CHMP4BP1P59074 171 aa10.17□□□□□ -0.78
GABRE-205ENST00000465405 EXOSC10Q01780 885 aaKnown RBP10.17□□□□□ -0.78
GABRE-205ENST00000465405 TRAF1Q13077 416 aa10.17□□□□□ -0.78
GABRE-205ENST00000465405 TSGA10IPQ3SY00 556 aa10.17□□□□□ -0.78
GABRE-205ENST00000465405 BRDTQ58F21 947 aaPredicted RBP10.17□□□□□ -0.78
GABRE-205ENST00000465405 FAM47CQ5HY64 1035 aa10.17□□□□□ -0.78
GABRE-205ENST00000465405 VSIG10LQ86VR7 867 aa10.17□□□□□ -0.78
GABRE-205ENST00000465405 SGMS1Q86VZ5 419 aa10.17□□□□□ -0.78
GABRE-205ENST00000465405 CCDC82Q8N4S0 544 aa10.17□□□□□ -0.78
GABRE-205ENST00000465405 SAMD3Q8N6K7 520 aa10.17□□□□□ -0.78
GABRE-205ENST00000465405 GPKOWQ92917 476 aaPredicted RBP eCLIP10.17□□□□□ -0.78
GABRE-205ENST00000465405 RRP36Q96EU6 259 aaKnown RBP10.17□□□□□ -0.78
GABRE-205ENST00000465405 RNPC3Q96LT9 517 aaKnown RBP10.17□□□□□ -0.78
GABRE-205ENST00000465405 FAM161BQ96MY7 647 aa10.17□□□□□ -0.78
GABRE-205ENST00000465405 ALDH8A1Q9H2A2 487 aaPredicted RBP10.17□□□□□ -0.78
GABRE-205ENST00000465405 HIPK3Q9H422 1215 aa10.17□□□□□ -0.78
GABRE-205ENST00000465405 SCUBE2Q9NQ36 999 aa10.17□□□□□ -0.78
GABRE-205ENST00000465405 TRMT13Q9NUP7 481 aaKnown RBP10.17□□□□□ -0.78
GABRE-205ENST00000465405 MTMR10Q9NXD2 777 aa10.17□□□□□ -0.78
GABRE-205ENST00000465405 SLC12A7Q9Y666 1083 aa10.17□□□□□ -0.78
GABRE-205ENST00000465405 MRVI1Q9Y6F6 885 aa10.17□□□□□ -0.78
GABRE-205ENST00000465405 SCN10AQ9Y5Y9 1956 aa10.17□□□□□ -0.78
GABRE-205ENST00000465405 MYH7BA7E2Y1 1941 aa10.16□□□□□ -0.78
GABRE-205ENST00000465405 KPNA6O60684 536 aa10.16□□□□□ -0.78
GABRE-205ENST00000465405 MMP3P08254 477 aa10.16□□□□□ -0.78
GABRE-205ENST00000465405 CALM1P0DP23 149 aa10.16□□□□□ -0.78
GABRE-205ENST00000465405 CALM2P0DP24 149 aa10.16□□□□□ -0.78
GABRE-205ENST00000465405 CALM3P0DP25 149 aa10.16□□□□□ -0.78
GABRE-205ENST00000465405 CPA1P15085 419 aa10.16□□□□□ -0.78
GABRE-205ENST00000465405 GNAQP50148 359 aa10.16□□□□□ -0.78
GABRE-205ENST00000465405 MRPS9P82933 396 aaKnown RBP10.16□□□□□ -0.78
GABRE-205ENST00000465405 SP2Q02086 613 aa10.16□□□□□ -0.78
GABRE-205ENST00000465405 PPIGQ13427 754 aaKnown RBP eCLIP10.16□□□□□ -0.782e-7■□□□□ 10.4
GABRE-205ENST00000465405 TMEM240Q5SV17 173 aa10.16□□□□□ -0.78
GABRE-205ENST00000465405 APOA5Q6Q788 366 aa10.16□□□□□ -0.78
GABRE-205ENST00000465405 USP17L6PQ6QN14 398 aa10.16□□□□□ -0.78
GABRE-205ENST00000465405 TMTC3Q6ZXV5 915 aa10.16□□□□□ -0.78
GABRE-205ENST00000465405 ZNF365Q70YC5 407 aa10.16□□□□□ -0.78
GABRE-205ENST00000465405 DHX32Q7L7V1 743 aaKnown RBP10.16□□□□□ -0.78
GABRE-205ENST00000465405 MICU3Q86XE3 530 aa10.16□□□□□ -0.78
GABRE-205ENST00000465405 TMEM199Q8N511 208 aa10.16□□□□□ -0.78
GABRE-205ENST00000465405 FANCBQ8NB91 859 aa10.16□□□□□ -0.78
GABRE-205ENST00000465405 KAT2BQ92831 832 aa10.16□□□□□ -0.78
GABRE-205ENST00000465405 LZTS2Q9BRK4 669 aa10.16□□□□□ -0.78
GABRE-205ENST00000465405 NOC4LQ9BVI4 516 aaKnown RBP10.16□□□□□ -0.78
GABRE-205ENST00000465405 SEZ6LQ9BYH1 1024 aa10.16□□□□□ -0.78
GABRE-205ENST00000465405 WNT8AQ9H1J5 351 aa10.16□□□□□ -0.78
GABRE-205ENST00000465405 BCAS3Q9H6U6 928 aa10.16□□□□□ -0.78
GABRE-205ENST00000465405 BRPF3Q9ULD4 1205 aa10.16□□□□□ -0.78
GABRE-205ENST00000465405 FRMPD4Q14CM0 1322 aa10.15□□□□□ -0.78
GABRE-205ENST00000465405 MEIS2O14770 477 aa10.15□□□□□ -0.78
GABRE-205ENST00000465405 CCND2P30279 289 aa10.15□□□□□ -0.78
GABRE-205ENST00000465405 SMAD3P84022 425 aaKnown RBP10.15□□□□□ -0.78
GABRE-205ENST00000465405 HSDL1Q3SXM5 330 aa10.15□□□□□ -0.78
GABRE-205ENST00000465405 FAM109BQ6ICB4 259 aaPredicted RBP10.15□□□□□ -0.78
GABRE-205ENST00000465405 NFRKBQ6P4R8 1299 aa10.15□□□□□ -0.78
GABRE-205ENST00000465405 DHX37Q8IY37 1157 aaKnown RBP10.15□□□□□ -0.78
GABRE-205ENST00000465405 VWCEQ96DN2 955 aa10.15□□□□□ -0.78
GABRE-205ENST00000465405 SCLYQ96I15 445 aa10.15□□□□□ -0.78
GABRE-205ENST00000465405 IL23AQ9NPF7 189 aa10.15□□□□□ -0.78
GABRE-205ENST00000465405 RTEL1Q9NZ71 1219 aa10.15□□□□□ -0.78
GABRE-205ENST00000465405 SEC63Q9UGP8 760 aaKnown RBP10.15□□□□□ -0.78
GABRE-205ENST00000465405 SNX14Q9Y5W7 946 aa10.15□□□□□ -0.78
GABRE-205ENST00000465405 RBAK-RBAKDNI3L0D1 243 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms