RNA–Protein interactions for RNA: ENST00000465135.1

C1orf56-202, Transcript of chromosome 1 open reading frame 56, humanhuman

TSL 3

Gene C1orf56, Length 433 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf56-202ENST00000465135 B4DLN1 442 aa12.22□□□□□ -0.45
C1orf56-202ENST00000465135 DTNBO60941 627 aa12.22□□□□□ -0.45
C1orf56-202ENST00000465135 MRPL12P52815 198 aaKnown RBP12.22□□□□□ -0.45
C1orf56-202ENST00000465135 MDM2Q00987 491 aaPredicted RBP12.22□□□□□ -0.45
C1orf56-202ENST00000465135 TRAF1Q13077 416 aa12.22□□□□□ -0.45
C1orf56-202ENST00000465135 STK3Q13188 491 aa12.22□□□□□ -0.45
C1orf56-202ENST00000465135 TTLL4Q14679 1199 aa12.22□□□□□ -0.45
C1orf56-202ENST00000465135 CCDC62Q6P9F0 684 aa12.22□□□□□ -0.45
C1orf56-202ENST00000465135 SMARCC2Q8TAQ2 1214 aa12.22□□□□□ -0.45
C1orf56-202ENST00000465135 PGBD1Q96JS3 809 aa12.22□□□□□ -0.45
C1orf56-202ENST00000465135 GLT1D1Q96MS3 346 aa12.22□□□□□ -0.45
C1orf56-202ENST00000465135 MAF1Q9H063 256 aa12.22□□□□□ -0.45
C1orf56-202ENST00000465135 PSTPIP2Q9H939 334 aa12.22□□□□□ -0.45
C1orf56-202ENST00000465135 PDLIM7Q9NR12 457 aa12.22□□□□□ -0.45
C1orf56-202ENST00000465135 TRIM43BA6NCK2 446 aa12.21□□□□□ -0.45
C1orf56-202ENST00000465135 STXBP3O00186 592 aa12.21□□□□□ -0.45
C1orf56-202ENST00000465135 EIF3JO75822 258 aaKnown RBP12.21□□□□□ -0.45
C1orf56-202ENST00000465135 MYL3P08590 195 aa12.21□□□□□ -0.45
C1orf56-202ENST00000465135 PDIA3P30101 505 aaKnown RBP12.21□□□□□ -0.45
C1orf56-202ENST00000465135 CCND2P30279 289 aa12.21□□□□□ -0.45
C1orf56-202ENST00000465135 NAPAP54920 295 aa12.21□□□□□ -0.45
C1orf56-202ENST00000465135 NKX3-2P78367 333 aa12.21□□□□□ -0.45
C1orf56-202ENST00000465135 MRPS9P82933 396 aaKnown RBP12.21□□□□□ -0.45
C1orf56-202ENST00000465135 HABP4Q5JVS0 413 aaKnown RBP12.21□□□□□ -0.45
C1orf56-202ENST00000465135 VSIG10LQ86VR7 867 aa12.21□□□□□ -0.45
C1orf56-202ENST00000465135 FBXL16Q8N461 479 aa12.21□□□□□ -0.45
C1orf56-202ENST00000465135 CUL5Q93034 780 aa12.21□□□□□ -0.45
C1orf56-202ENST00000465135 TRIM43Q96BQ3 446 aaPredicted RBP12.21□□□□□ -0.45
C1orf56-202ENST00000465135 TM6SF1Q9BZW5 370 aa12.21□□□□□ -0.45
C1orf56-202ENST00000465135 BCAS3Q9H6U6 928 aa12.21□□□□□ -0.45
C1orf56-202ENST00000465135 PDRG1Q9NUG6 133 aa12.21□□□□□ -0.45
C1orf56-202ENST00000465135 MAP3K20Q9NYL2 800 aaKnown RBP12.21□□□□□ -0.45
C1orf56-202ENST00000465135 RTEL1Q9NZ71 1219 aa12.21□□□□□ -0.45
C1orf56-202ENST00000465135 Q9Y3F1 56 aa12.21□□□□□ -0.45
C1orf56-202ENST00000465135 MRVI1Q9Y6F6 885 aa12.21□□□□□ -0.45
C1orf56-202ENST00000465135 NID2Q14112 1375 aa12.2□□□□□ -0.46
C1orf56-202ENST00000465135 GRIN2DO15399 1336 aa12.2□□□□□ -0.46
C1orf56-202ENST00000465135 FRMPD4Q14CM0 1322 aa12.2□□□□□ -0.46
C1orf56-202ENST00000465135 SCN10AQ9Y5Y9 1956 aa12.2□□□□□ -0.46
C1orf56-202ENST00000465135 A0A0U1RQG5 324 aaPredicted RBP12.2□□□□□ -0.46
C1orf56-202ENST00000465135 ADAMTS3O15072 1205 aa12.2□□□□□ -0.46
C1orf56-202ENST00000465135 ITGB8P26012 769 aa12.2□□□□□ -0.46
C1orf56-202ENST00000465135 RCAN1P53805 252 aa12.2□□□□□ -0.46
C1orf56-202ENST00000465135 CHMP4BP1P59074 171 aa12.2□□□□□ -0.46
C1orf56-202ENST00000465135 SP2Q02086 613 aa12.2□□□□□ -0.46
C1orf56-202ENST00000465135 ARHGAP1Q07960 439 aa12.2□□□□□ -0.46
C1orf56-202ENST00000465135 NTRK3Q16288 839 aa12.2□□□□□ -0.46
C1orf56-202ENST00000465135 C8orf34Q49A92 452 aa12.2□□□□□ -0.46
C1orf56-202ENST00000465135 C1orf53Q5VUE5 145 aa12.2□□□□□ -0.46
C1orf56-202ENST00000465135 SAMD3Q8N6K7 520 aa12.2□□□□□ -0.46
C1orf56-202ENST00000465135 AFG1LQ8WV93 481 aa12.2□□□□□ -0.46
C1orf56-202ENST00000465135 GDF15Q99988 308 aa12.2□□□□□ -0.46
C1orf56-202ENST00000465135 PRO3102Q9H379 93 aa12.2□□□□□ -0.46
C1orf56-202ENST00000465135 DDX41Q9UJV9 622 aaKnown RBP12.2□□□□□ -0.46
C1orf56-202ENST00000465135 ELP1O95163 1332 aa12.19□□□□□ -0.46
C1orf56-202ENST00000465135 ARVCFO00192 962 aa12.19□□□□□ -0.46
C1orf56-202ENST00000465135 PIK3CDO00329 1044 aa12.19□□□□□ -0.46
C1orf56-202ENST00000465135 NKRFO15226 690 aaKnown RBP eCLIP12.19□□□□□ -0.46
C1orf56-202ENST00000465135 ZEB2O60315 1214 aa12.19□□□□□ -0.46
C1orf56-202ENST00000465135 GH1P01241 217 aa12.19□□□□□ -0.46
C1orf56-202ENST00000465135 CLTBP09497 229 aa12.19□□□□□ -0.46
C1orf56-202ENST00000465135 CPT1AP50416 773 aa12.19□□□□□ -0.46
C1orf56-202ENST00000465135 EVCP57679 992 aa12.19□□□□□ -0.46
C1orf56-202ENST00000465135 PURAQ00577 322 aaKnown RBP12.19□□□□□ -0.46
C1orf56-202ENST00000465135 FAAP100Q0VG06 881 aa12.19□□□□□ -0.46
C1orf56-202ENST00000465135 SEMA3FQ13275 785 aa12.19□□□□□ -0.46
C1orf56-202ENST00000465135 ITGA7Q13683 1181 aa12.19□□□□□ -0.46
C1orf56-202ENST00000465135 PKN1Q16512 942 aa12.19□□□□□ -0.46
C1orf56-202ENST00000465135 SLC26A6Q9BXS9 759 aa12.19□□□□□ -0.46
C1orf56-202ENST00000465135 TMEM260Q9NX78 707 aa12.19□□□□□ -0.46
C1orf56-202ENST00000465135 BARHL2Q9NY43 387 aa12.19□□□□□ -0.46
C1orf56-202ENST00000465135 PRKAG2Q9UGJ0 569 aa12.19□□□□□ -0.46
C1orf56-202ENST00000465135 CCDC196A0A1B0GTZ2 297 aa12.18□□□□□ -0.46
C1orf56-202ENST00000465135 SMCO2A6NFE2 343 aa12.18□□□□□ -0.46
C1orf56-202ENST00000465135 A6NJR5 290 aa12.18□□□□□ -0.46
C1orf56-202ENST00000465135 RBAK-RBAKDNI3L0D1 243 aa12.18□□□□□ -0.46
C1orf56-202ENST00000465135 GGPS1O95749 300 aa12.18□□□□□ -0.46
C1orf56-202ENST00000465135 MMP3P08254 477 aa12.18□□□□□ -0.46
C1orf56-202ENST00000465135 SCG2P13521 617 aa12.18□□□□□ -0.46
C1orf56-202ENST00000465135 UBA1P22314 1058 aaKnown RBP12.18□□□□□ -0.46
C1orf56-202ENST00000465135 CDK7P50613 346 aa12.18□□□□□ -0.46
C1orf56-202ENST00000465135 ADCY7P51828 1080 aa12.18□□□□□ -0.46
C1orf56-202ENST00000465135 PFKFB3Q16875 520 aaPredicted RBP12.18□□□□□ -0.46
C1orf56-202ENST00000465135 ANKRD33Q7Z3H0 272 aa12.18□□□□□ -0.46
C1orf56-202ENST00000465135 FAM126BQ8IXS8 530 aa12.18□□□□□ -0.46
C1orf56-202ENST00000465135 BADQ92934 168 aa12.18□□□□□ -0.46
C1orf56-202ENST00000465135 PCDHA6Q9UN73 950 aa12.18□□□□□ -0.46
C1orf56-202ENST00000465135 TELO2Q9Y4R8 837 aa12.18□□□□□ -0.46
C1orf56-202ENST00000465135 PCDHA8Q9Y5H6 950 aa12.18□□□□□ -0.46
C1orf56-202ENST00000465135 DCDC2CA8MYV0 355 aa12.17□□□□□ -0.46
C1orf56-202ENST00000465135 PRPF3O43395 683 aaKnown RBP12.17□□□□□ -0.46
C1orf56-202ENST00000465135 LARGE1O95461 756 aa12.17□□□□□ -0.46
C1orf56-202ENST00000465135 ZNF286BP0CG31 522 aa12.17□□□□□ -0.46
C1orf56-202ENST00000465135 KCNA4P22459 653 aa12.17□□□□□ -0.46
C1orf56-202ENST00000465135 AK2P54819 239 aa12.17□□□□□ -0.46
C1orf56-202ENST00000465135 ANAPC15P60006 121 aa12.17□□□□□ -0.46
C1orf56-202ENST00000465135 PCNX4Q63HM2 1172 aa12.17□□□□□ -0.46
C1orf56-202ENST00000465135 PPP1R18Q6NYC8 613 aa12.17□□□□□ -0.46
C1orf56-202ENST00000465135 DHX37Q8IY37 1157 aaKnown RBP12.17□□□□□ -0.46
C1orf56-202ENST00000465135 SLC43A3Q8NBI5 491 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms