RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 CAGE1Q8TC20 777 aa26.51■■□□□ 1.83
USP42-205ENST00000465073 EMID1Q96A84 441 aaPredicted RBP26.51■■□□□ 1.83
USP42-205ENST00000465073 SLC9A7Q96T83 725 aa26.51■■□□□ 1.83
USP42-205ENST00000465073 PXMP2Q9NR77 195 aa26.51■■□□□ 1.83
USP42-205ENST00000465073 MAP3K20Q9NYL2 800 aaKnown RBP26.51■■□□□ 1.83
USP42-205ENST00000465073 THEGQ9P2T0 379 aa26.51■■□□□ 1.83
USP42-205ENST00000465073 DDX41Q9UJV9 622 aaKnown RBP26.51■■□□□ 1.83
USP42-205ENST00000465073 GHRHRQ02643 423 aa26.5■■□□□ 1.83
USP42-205ENST00000465073 CCDC85BQ15834 202 aaPredicted RBP26.5■■□□□ 1.83
USP42-205ENST00000465073 KAT2BQ92831 832 aa26.5■■□□□ 1.83
USP42-205ENST00000465073 MTMR8Q96EF0 704 aa26.5■■□□□ 1.83
USP42-205ENST00000465073 IL25Q9H293 177 aa26.5■■□□□ 1.83
USP42-205ENST00000465073 CHD7Q9P2D1 2997 aa26.5■■□□□ 1.83
USP42-205ENST00000465073 LAMC2Q13753 1193 aa26.49■■□□□ 1.83
USP42-205ENST00000465073 GDF6Q6KF10 455 aaPredicted RBP26.49■■□□□ 1.83
USP42-205ENST00000465073 CYB5R4Q7L1T6 521 aa26.49■■□□□ 1.83
USP42-205ENST00000465073 SAMD3Q8N6K7 520 aa26.49■■□□□ 1.83
USP42-205ENST00000465073 GBF1Q92538 1859 aa26.49■■□□□ 1.83
USP42-205ENST00000465073 OPLAHO14841 1288 aa26.49■■□□□ 1.83
USP42-205ENST00000465073 ZBTB5O15062 677 aa26.49■■□□□ 1.83
USP42-205ENST00000465073 TRDNQ13061 729 aa26.49■■□□□ 1.83
USP42-205ENST00000465073 AFAP1L1Q8TED9 768 aa26.49■■□□□ 1.83
USP42-205ENST00000465073 ASB2Q96Q27 587 aa26.49■■□□□ 1.83
USP42-205ENST00000465073 MAD2L2Q9UI95 211 aa26.49■■□□□ 1.83
USP42-205ENST00000465073 PCDHA1Q9Y5I3 950 aa26.49■■□□□ 1.83
USP42-205ENST00000465073 MRVI1Q9Y6F6 885 aa26.49■■□□□ 1.83
USP42-205ENST00000465073 PALM3A6NDB9 673 aaPredicted RBP26.48■■□□□ 1.83
USP42-205ENST00000465073 BAIAP3O94812 1187 aa26.48■■□□□ 1.83
USP42-205ENST00000465073 TRAF1Q13077 416 aa26.48■■□□□ 1.83
USP42-205ENST00000465073 PPTC7Q8NI37 304 aa26.48■■□□□ 1.83
USP42-205ENST00000465073 CTAGE1Q96RT6 745 aa26.48■■□□□ 1.83
USP42-205ENST00000465073 SPTBN5Q9NRC6 3674 aaKnown RBP26.47■■□□□ 1.83
USP42-205ENST00000465073 PPP1R11O60927 126 aaPredicted RBP26.47■■□□□ 1.83
USP42-205ENST00000465073 CA3P07451 260 aa26.47■■□□□ 1.83
USP42-205ENST00000465073 MRPS5P82675 430 aaKnown RBP26.47■■□□□ 1.83
USP42-205ENST00000465073 TTC22Q5TAA0 569 aa26.47■■□□□ 1.83
USP42-205ENST00000465073 KCNV1Q6PIU1 500 aa26.47■■□□□ 1.83
USP42-205ENST00000465073 STOX1Q6ZVD7 989 aa26.47■■□□□ 1.83
USP42-205ENST00000465073 DHX37Q8IY37 1157 aaKnown RBP26.47■■□□□ 1.83
USP42-205ENST00000465073 RUFY2Q8WXA3 655 aa26.47■■□□□ 1.83
USP42-205ENST00000465073 KATNAL1Q9BW62 490 aa26.47■■□□□ 1.83
USP42-205ENST00000465073 U3KPZ7 1027 aaPredicted RBP26.47■■□□□ 1.83
USP42-205ENST00000465073 SCN5AQ14524 2016 aa26.46■■□□□ 1.83
USP42-205ENST00000465073 KIF28PB7ZC32 967 aa26.46■■□□□ 1.83
USP42-205ENST00000465073 PARNO95453 639 aaKnown RBP26.46■■□□□ 1.83
USP42-205ENST00000465073 HERC6Q8IVU3 1022 aa26.46■■□□□ 1.83
USP42-205ENST00000465073 C7orf31Q8N865 590 aa26.46■■□□□ 1.83
USP42-205ENST00000465073 PDCD2LQ9BRP1 358 aa26.46■■□□□ 1.83
USP42-205ENST00000465073 TSPYL2Q9H2G4 693 aaPredicted RBP26.46■■□□□ 1.83
USP42-205ENST00000465073 GSPT1P15170 499 aaKnown RBP26.45■■□□□ 1.82
USP42-205ENST00000465073 SELPP16109 830 aa26.45■■□□□ 1.82
USP42-205ENST00000465073 PDE4AP27815 886 aa26.45■■□□□ 1.82
USP42-205ENST00000465073 PSEN2P49810 448 aa26.45■■□□□ 1.82
USP42-205ENST00000465073 RBL2Q08999 1139 aa26.45■■□□□ 1.82
USP42-205ENST00000465073 GTF2IRD1Q9UHL9 959 aa26.45■■□□□ 1.82
USP42-205ENST00000465073 TNFRSF10AO00220 468 aa26.44■■□□□ 1.82
USP42-205ENST00000465073 GRM4Q14833 912 aa26.44■■□□□ 1.82
USP42-205ENST00000465073 LRRC8DQ7L1W4 858 aa26.44■■□□□ 1.82
USP42-205ENST00000465073 VSIG10LQ86VR7 867 aa26.44■■□□□ 1.82
USP42-205ENST00000465073 DHX38Q92620 1227 aaKnown RBP26.44■■□□□ 1.82
USP42-205ENST00000465073 HDAC6Q9UBN7 1215 aa26.44■■□□□ 1.82
USP42-205ENST00000465073 KIAA1217Q5T5P2 1943 aa26.44■■□□□ 1.82
USP42-205ENST00000465073 MYH6P13533 1939 aa26.43■■□□□ 1.82
USP42-205ENST00000465073 F2P00734 622 aa26.43■■□□□ 1.82
USP42-205ENST00000465073 CYP21A2P08686 494 aa26.43■■□□□ 1.82
USP42-205ENST00000465073 MYCLP12524 364 aaPredicted RBP26.43■■□□□ 1.82
USP42-205ENST00000465073 POU3F3P20264 500 aaPredicted RBP26.43■■□□□ 1.82
USP42-205ENST00000465073 MFSD10Q14728 455 aa26.43■■□□□ 1.82
USP42-205ENST00000465073 RIOX1Q9H6W3 641 aa26.43■■□□□ 1.82
USP42-205ENST00000465073 ERICH2A1L162 156 aa26.42■■□□□ 1.82
USP42-205ENST00000465073 HAS3O00219 553 aa26.42■■□□□ 1.82
USP42-205ENST00000465073 IFIT3O14879 490 aaKnown RBP26.42■■□□□ 1.82
USP42-205ENST00000465073 PPFIA4O75335 1185 aa26.42■■□□□ 1.82
USP42-205ENST00000465073 RGS20O76081 388 aa26.42■■□□□ 1.82
USP42-205ENST00000465073 TGFB3P10600 412 aa26.42■■□□□ 1.82
USP42-205ENST00000465073 HOXD8P13378 290 aaPredicted RBP26.42■■□□□ 1.82
USP42-205ENST00000465073 HOXA13P31271 388 aaPredicted RBP26.42■■□□□ 1.82
USP42-205ENST00000465073 KCNJ6P48051 423 aa26.42■■□□□ 1.82
USP42-205ENST00000465073 GPNMBQ14956 572 aa26.42■■□□□ 1.82
USP42-205ENST00000465073 KIAA0753Q2KHM9 967 aa26.42■■□□□ 1.82
USP42-205ENST00000465073 ALG1Q9BT22 464 aa26.42■■□□□ 1.82
USP42-205ENST00000465073 TANC1Q9C0D5 1861 aa26.42■■□□□ 1.82
USP42-205ENST00000465073 GCOM1H8Y6P7 765 aaPredicted RBP26.42■■□□□ 1.82
USP42-205ENST00000465073 POLR2MP0CAP2 368 aa26.42■■□□□ 1.82
USP42-205ENST00000465073 CKBP12277 381 aa26.42■■□□□ 1.82
USP42-205ENST00000465073 CHMLP26374 656 aa26.42■■□□□ 1.82
USP42-205ENST00000465073 PTH1RQ03431 593 aa26.42■■□□□ 1.82
USP42-205ENST00000465073 TAP1Q03518 808 aa26.42■■□□□ 1.82
USP42-205ENST00000465073 PTK7Q13308 1070 aa26.42■■□□□ 1.82
USP42-205ENST00000465073 PGM5Q15124 567 aa26.42■■□□□ 1.82
USP42-205ENST00000465073 CELF3Q5SZQ8 465 aaKnown RBP26.42■■□□□ 1.82
USP42-205ENST00000465073 MYSM1Q5VVJ2 828 aa26.42■■□□□ 1.82
USP42-205ENST00000465073 HOMER1Q86YM7 354 aa26.42■■□□□ 1.82
USP42-205ENST00000465073 MICALL1Q8N3F8 863 aa26.42■■□□□ 1.82
USP42-205ENST00000465073 GTPBP6O43824 516 aaPredicted RBP26.41■■□□□ 1.82
USP42-205ENST00000465073 ZNF286BP0CG31 522 aa26.41■■□□□ 1.82
USP42-205ENST00000465073 SART3Q15020 963 aaKnown RBP26.41■■□□□ 1.82
USP42-205ENST00000465073 SLC35G1Q2M3R5 365 aa26.41■■□□□ 1.82
USP42-205ENST00000465073 RALYLQ86SE5 291 aaKnown RBP26.41■■□□□ 1.82
USP42-205ENST00000465073 IL27Q8NEV9 243 aa26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms