RNA–Protein interactions for RNA: ENST00000464045.1

THUMPD3-208, Transcript of THUMP domain containing 3, humanhuman

TSL 2

Gene THUMPD3, Length 601 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-208ENST00000464045 GOLGA8AA7E2F4 631 aa8.57□□□□□ -1.04
THUMPD3-208ENST00000464045 GOLGA8BA8MQT2 603 aa8.57□□□□□ -1.04
THUMPD3-208ENST00000464045 DYNC1LI2O43237 492 aaPredicted RBP8.57□□□□□ -1.04
THUMPD3-208ENST00000464045 KPNA6O60684 536 aa8.57□□□□□ -1.04
THUMPD3-208ENST00000464045 NR3C2P08235 984 aa8.57□□□□□ -1.04
THUMPD3-208ENST00000464045 EIF2AK2P19525 551 aaKnown RBP8.57□□□□□ -1.04
THUMPD3-208ENST00000464045 RXRAP19793 462 aa8.57□□□□□ -1.04
THUMPD3-208ENST00000464045 CASTP20810 708 aaKnown RBP8.57□□□□□ -1.04
THUMPD3-208ENST00000464045 EVCP57679 992 aa8.57□□□□□ -1.04
THUMPD3-208ENST00000464045 ANAPC15P60006 121 aa8.57□□□□□ -1.04
THUMPD3-208ENST00000464045 PLCB2Q00722 1185 aa8.57□□□□□ -1.04
THUMPD3-208ENST00000464045 FUT2Q10981 343 aa8.57□□□□□ -1.04
THUMPD3-208ENST00000464045 TRIM60Q495X7 471 aa8.57□□□□□ -1.04
THUMPD3-208ENST00000464045 PPP1R18Q6NYC8 613 aa8.57□□□□□ -1.04
THUMPD3-208ENST00000464045 XRRA1Q6P2D8 792 aa8.57□□□□□ -1.04
THUMPD3-208ENST00000464045 CCDC62Q6P9F0 684 aa8.57□□□□□ -1.04
THUMPD3-208ENST00000464045 KCNV1Q6PIU1 500 aa8.57□□□□□ -1.04
THUMPD3-208ENST00000464045 RUFY3Q7L099 469 aa8.57□□□□□ -1.04
THUMPD3-208ENST00000464045 VSIG10LQ86VR7 867 aa8.57□□□□□ -1.04
THUMPD3-208ENST00000464045 BRF1Q92994 677 aa8.57□□□□□ -1.04
THUMPD3-208ENST00000464045 EMID1Q96A84 441 aaPredicted RBP8.57□□□□□ -1.04
THUMPD3-208ENST00000464045 FERMT2Q96AC1 680 aa8.57□□□□□ -1.04
THUMPD3-208ENST00000464045 TCEANC2Q96MN5 208 aa8.57□□□□□ -1.04
THUMPD3-208ENST00000464045 PDCD2LQ9BRP1 358 aa8.57□□□□□ -1.04
THUMPD3-208ENST00000464045 POLR3EQ9NVU0 708 aa8.57□□□□□ -1.04
THUMPD3-208ENST00000464045 ATP11BQ9Y2G3 1177 aa8.57□□□□□ -1.04
THUMPD3-208ENST00000464045 CYP46A1Q9Y6A2 500 aa8.57□□□□□ -1.04
THUMPD3-208ENST00000464045 DDX49Q9Y6V7 483 aaKnown RBP8.57□□□□□ -1.04
THUMPD3-208ENST00000464045 SMCHD1A6NHR9 2005 aa8.57□□□□□ -1.04
THUMPD3-208ENST00000464045 CNTNAP5Q8WYK1 1306 aa8.56□□□□□ -1.04
THUMPD3-208ENST00000464045 TTC28Q96AY4 2481 aa8.56□□□□□ -1.04
THUMPD3-208ENST00000464045 A6NJR5 290 aa8.56□□□□□ -1.04
THUMPD3-208ENST00000464045 DCDC2CA8MYV0 355 aa8.56□□□□□ -1.04
THUMPD3-208ENST00000464045 ARVCFO00192 962 aa8.56□□□□□ -1.04
THUMPD3-208ENST00000464045 TXNP10599 105 aaKnown RBP8.56□□□□□ -1.04
THUMPD3-208ENST00000464045 TGFB3P10600 412 aa8.56□□□□□ -1.04
THUMPD3-208ENST00000464045 CCND2P30279 289 aa8.56□□□□□ -1.04
THUMPD3-208ENST00000464045 HOXA13P31271 388 aaPredicted RBP8.56□□□□□ -1.04
THUMPD3-208ENST00000464045 METAP2P50579 478 aaKnown RBP eCLIP8.56□□□□□ -1.04
THUMPD3-208ENST00000464045 CDK7P50613 346 aa8.56□□□□□ -1.04
THUMPD3-208ENST00000464045 PGM5Q15124 567 aa8.56□□□□□ -1.04
THUMPD3-208ENST00000464045 SLC43A3Q8NBI5 491 aa8.56□□□□□ -1.04
THUMPD3-208ENST00000464045 OR6J1Q8NGC5 347 aa8.56□□□□□ -1.04
THUMPD3-208ENST00000464045 SMARCC2Q8TAQ2 1214 aa8.56□□□□□ -1.04
THUMPD3-208ENST00000464045 PIBF1Q8WXW3 757 aa8.56□□□□□ -1.04
THUMPD3-208ENST00000464045 IL17RAQ96F46 866 aa8.56□□□□□ -1.04
THUMPD3-208ENST00000464045 GLT8D2Q9H1C3 349 aa8.56□□□□□ -1.04
THUMPD3-208ENST00000464045 PSTPIP2Q9H939 334 aa8.56□□□□□ -1.04
THUMPD3-208ENST00000464045 FAM217BQ9NTX9 383 aaPredicted RBP8.56□□□□□ -1.04
THUMPD3-208ENST00000464045 MCM3APO60318 1980 aa8.55□□□□□ -1.04
THUMPD3-208ENST00000464045 MEIS2O14770 477 aa8.55□□□□□ -1.04
THUMPD3-208ENST00000464045 KIAA0355O15063 1070 aa8.55□□□□□ -1.04
THUMPD3-208ENST00000464045 ARIH2O95376 493 aa8.55□□□□□ -1.04
THUMPD3-208ENST00000464045 GH1P01241 217 aa8.55□□□□□ -1.04
THUMPD3-208ENST00000464045 CLTBP09497 229 aa8.55□□□□□ -1.04
THUMPD3-208ENST00000464045 CPA1P15085 419 aa8.55□□□□□ -1.04
THUMPD3-208ENST00000464045 CDC27P30260 824 aa8.55□□□□□ -1.04
THUMPD3-208ENST00000464045 PURAQ00577 322 aaKnown RBP8.55□□□□□ -1.04
THUMPD3-208ENST00000464045 BEX3Q00994 111 aa8.55□□□□□ -1.04
THUMPD3-208ENST00000464045 TLE2Q04725 743 aa8.55□□□□□ -1.04
THUMPD3-208ENST00000464045 APOBRQ0VD83 1088 aa8.55□□□□□ -1.04
THUMPD3-208ENST00000464045 GNPTABQ3T906 1256 aa8.55□□□□□ -1.04
THUMPD3-208ENST00000464045 CXCL17Q6UXB2 119 aa8.55□□□□□ -1.04
THUMPD3-208ENST00000464045 SEPT14Q6ZU15 432 aa8.55□□□□□ -1.04
THUMPD3-208ENST00000464045 HEATR3Q7Z4Q2 680 aa8.55□□□□□ -1.04
THUMPD3-208ENST00000464045 FCHSD1Q86WN1 690 aa8.55□□□□□ -1.04
THUMPD3-208ENST00000464045 RAB11FIP4Q86YS3 637 aa8.55□□□□□ -1.04
THUMPD3-208ENST00000464045 CMTR1Q8N1G2 835 aaKnown RBP8.55□□□□□ -1.04
THUMPD3-208ENST00000464045 CCDC82Q8N4S0 544 aa8.55□□□□□ -1.04
THUMPD3-208ENST00000464045 VTI1AQ96AJ9 217 aa8.55□□□□□ -1.04
THUMPD3-208ENST00000464045 LBHD1Q9BQE6 289 aaPredicted RBP8.55□□□□□ -1.04
THUMPD3-208ENST00000464045 EHMT1Q9H9B1 1298 aa8.55□□□□□ -1.04
THUMPD3-208ENST00000464045 PRDM5Q9NQX1 630 aaPredicted RBP8.55□□□□□ -1.04
THUMPD3-208ENST00000464045 PDLIM7Q9NR12 457 aa8.55□□□□□ -1.04
THUMPD3-208ENST00000464045 MTMR10Q9NXD2 777 aa8.55□□□□□ -1.04
THUMPD3-208ENST00000464045 BARHL2Q9NY43 387 aa8.55□□□□□ -1.04
THUMPD3-208ENST00000464045 DDX41Q9UJV9 622 aaKnown RBP8.55□□□□□ -1.04
THUMPD3-208ENST00000464045 NAP1L2Q9ULW6 460 aaPredicted RBP8.55□□□□□ -1.04
THUMPD3-208ENST00000464045 MRVI1Q9Y6F6 885 aa8.55□□□□□ -1.04
THUMPD3-208ENST00000464045 TLR3O15455 904 aaKnown RBP8.54□□□□□ -1.04
THUMPD3-208ENST00000464045 PQBP1O60828 265 aaKnown RBP8.54□□□□□ -1.04
THUMPD3-208ENST00000464045 MYCLP12524 364 aaPredicted RBP8.54□□□□□ -1.04
THUMPD3-208ENST00000464045 PDIA3P30101 505 aaKnown RBP8.54□□□□□ -1.04
THUMPD3-208ENST00000464045 ICAM3P32942 547 aa8.54□□□□□ -1.04
THUMPD3-208ENST00000464045 ADD1P35611 737 aaKnown RBP8.54□□□□□ -1.04
THUMPD3-208ENST00000464045 IRX5P78411 483 aaPredicted RBP8.54□□□□□ -1.04
THUMPD3-208ENST00000464045 ARHGAP1Q07960 439 aa8.54□□□□□ -1.04
THUMPD3-208ENST00000464045 ITGA7Q13683 1181 aa8.54□□□□□ -1.04
THUMPD3-208ENST00000464045 LAMC2Q13753 1193 aa8.54□□□□□ -1.04
THUMPD3-208ENST00000464045 TOB2Q14106 344 aaPredicted RBP8.54□□□□□ -1.04
THUMPD3-208ENST00000464045 PFKFB3Q16875 520 aaPredicted RBP8.54□□□□□ -1.04
THUMPD3-208ENST00000464045 LY6KQ17RY6 165 aa8.54□□□□□ -1.04
THUMPD3-208ENST00000464045 LRIT3Q3SXY7 679 aa8.54□□□□□ -1.04
THUMPD3-208ENST00000464045 TMEM63BQ5T3F8 832 aa8.54□□□□□ -1.04
THUMPD3-208ENST00000464045 PCNX4Q63HM2 1172 aa8.54□□□□□ -1.04
THUMPD3-208ENST00000464045 WWC2Q6AWC2 1192 aa8.54□□□□□ -1.04
THUMPD3-208ENST00000464045 MCTP2Q6DN12 878 aa8.54□□□□□ -1.04
THUMPD3-208ENST00000464045 USP17L6PQ6QN14 398 aa8.54□□□□□ -1.04
THUMPD3-208ENST00000464045 FAM126BQ8IXS8 530 aa8.54□□□□□ -1.04
THUMPD3-208ENST00000464045 PPTC7Q8NI37 304 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms