RNA–Protein interactions for RNA: ENST00000463369.5

SHQ1-203, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2 BASIC

Gene SHQ1, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-203ENST00000463369 ZC3H12CQ9C0D7 883 aaKnown RBP9.67□□□□□ -0.86
SHQ1-203ENST00000463369 EHD4Q9H223 541 aa9.67□□□□□ -0.86
SHQ1-203ENST00000463369 HOOK1Q9UJC3 728 aaKnown RBP9.67□□□□□ -0.86
SHQ1-203ENST00000463369 CDK5RAP2Q96SN8 1893 aa9.66□□□□□ -0.86
SHQ1-203ENST00000463369 COL1A1P02452 1464 aaPredicted RBP9.66□□□□□ -0.86
SHQ1-203ENST00000463369 H0YHG0 523 aa9.66□□□□□ -0.86
SHQ1-203ENST00000463369 RGS20O76081 388 aa9.66□□□□□ -0.86
SHQ1-203ENST00000463369 FMR1Q06787 632 aaKnown RBP eCLIP9.66□□□□□ -0.86
SHQ1-203ENST00000463369 KCTD2Q14681 263 aa9.66□□□□□ -0.86
SHQ1-203ENST00000463369 RESP18Q5W5W9 173 aa9.66□□□□□ -0.86
SHQ1-203ENST00000463369 SPATS2Q86XZ4 545 aaKnown RBP9.66□□□□□ -0.86
SHQ1-203ENST00000463369 OTUD6BQ8N6M0 293 aa9.66□□□□□ -0.86
SHQ1-203ENST00000463369 SUPT20HQ8NEM7 779 aa9.66□□□□□ -0.86
SHQ1-203ENST00000463369 NLGN2Q8NFZ4 835 aa9.66□□□□□ -0.86
SHQ1-203ENST00000463369 SVIPQ8NHG7 77 aa9.66□□□□□ -0.86
SHQ1-203ENST00000463369 FAXDC2Q96IV6 333 aa9.66□□□□□ -0.86
SHQ1-203ENST00000463369 FHDC1Q9C0D6 1143 aaPredicted RBP9.66□□□□□ -0.86
SHQ1-203ENST00000463369 VEZTQ9HBM0 779 aa9.66□□□□□ -0.86
SHQ1-203ENST00000463369 CD248Q9HCU0 757 aa9.66□□□□□ -0.86
SHQ1-203ENST00000463369 CD209Q9NNX6 404 aa9.66□□□□□ -0.86
SHQ1-203ENST00000463369 GPHNQ9NQX3 736 aaPredicted RBP9.66□□□□□ -0.86
SHQ1-203ENST00000463369 TYW1Q9NV66 732 aaKnown RBP9.66□□□□□ -0.86
SHQ1-203ENST00000463369 A6NNZ2 444 aa9.65□□□□□ -0.86
SHQ1-203ENST00000463369 KIF28PB7ZC32 967 aa9.65□□□□□ -0.86
SHQ1-203ENST00000463369 MEFVO15553 781 aaPredicted RBP9.65□□□□□ -0.86
SHQ1-203ENST00000463369 GNGT1P63211 74 aa9.65□□□□□ -0.86
SHQ1-203ENST00000463369 KIF23Q02241 960 aaPredicted RBP9.65□□□□□ -0.86
SHQ1-203ENST00000463369 DSG2Q14126 1118 aa9.65□□□□□ -0.86
SHQ1-203ENST00000463369 PPP2R5AQ15172 486 aa9.65□□□□□ -0.86
SHQ1-203ENST00000463369 TUBB8Q3ZCM7 444 aa9.65□□□□□ -0.86
SHQ1-203ENST00000463369 WLSQ5T9L3 541 aa9.65□□□□□ -0.86
SHQ1-203ENST00000463369 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.65□□□□□ -0.86
SHQ1-203ENST00000463369 GLYCTKQ8IVS8 523 aa9.65□□□□□ -0.86
SHQ1-203ENST00000463369 FBXL16Q8N461 479 aa9.65□□□□□ -0.86
SHQ1-203ENST00000463369 JMYQ8N9B5 988 aa9.65□□□□□ -0.86
SHQ1-203ENST00000463369 MLKLQ8NB16 471 aa9.65□□□□□ -0.86
SHQ1-203ENST00000463369 FRMD6Q96NE9 622 aa9.65□□□□□ -0.86
SHQ1-203ENST00000463369 LRRC27Q9C0I9 530 aa9.65□□□□□ -0.86
SHQ1-203ENST00000463369 COA1Q9GZY4 146 aa9.65□□□□□ -0.86
SHQ1-203ENST00000463369 INPP5FQ9Y2H2 1132 aa9.65□□□□□ -0.86
SHQ1-203ENST00000463369 SAMM50Q9Y512 469 aa9.65□□□□□ -0.86
SHQ1-203ENST00000463369 TMCO5BA8MYB1 307 aa9.65□□□□□ -0.87
SHQ1-203ENST00000463369 E7EWF7 191 aa9.65□□□□□ -0.87
SHQ1-203ENST00000463369 KIF3CO14782 793 aa9.65□□□□□ -0.87
SHQ1-203ENST00000463369 RIMBP2O15034 1052 aa9.65□□□□□ -0.87
SHQ1-203ENST00000463369 TEX33O43247 280 aa9.65□□□□□ -0.87
SHQ1-203ENST00000463369 KIAA0754O94854 1291 aa9.65□□□□□ -0.87
SHQ1-203ENST00000463369 GCFC2P16383 781 aaKnown RBP9.65□□□□□ -0.87
SHQ1-203ENST00000463369 NF2P35240 595 aa9.65□□□□□ -0.87
SHQ1-203ENST00000463369 ARHGAP25P42331 645 aa9.65□□□□□ -0.87
SHQ1-203ENST00000463369 COL19A1Q14993 1142 aa9.65□□□□□ -0.87
SHQ1-203ENST00000463369 MAPRE1Q15691 268 aaKnown RBP9.65□□□□□ -0.87
SHQ1-203ENST00000463369 PLEKHG4Q58EX7 1191 aa9.65□□□□□ -0.87
SHQ1-203ENST00000463369 CCNI2Q6ZMN8 369 aaPredicted RBP9.65□□□□□ -0.87
SHQ1-203ENST00000463369 TRAPPC11Q7Z392 1133 aa9.65□□□□□ -0.87
SHQ1-203ENST00000463369 ZSCAN29Q8IWY8 852 aaPredicted RBP9.65□□□□□ -0.87
SHQ1-203ENST00000463369 PAF1Q8N7H5 531 aa9.65□□□□□ -0.87
SHQ1-203ENST00000463369 CPLX3Q8WVH0 158 aa9.65□□□□□ -0.87
SHQ1-203ENST00000463369 CCDC51Q96ER9 411 aa9.65□□□□□ -0.87
SHQ1-203ENST00000463369 SELENOOQ9BVL4 669 aa9.65□□□□□ -0.87
SHQ1-203ENST00000463369 MUC3BQ9H195 1237 aa9.65□□□□□ -0.87
SHQ1-203ENST00000463369 SAMSN1Q9NSI8 373 aaKnown RBP9.65□□□□□ -0.87
SHQ1-203ENST00000463369 DACH1Q9UI36 760 aa9.65□□□□□ -0.87
SHQ1-203ENST00000463369 MAN1B1Q9UKM7 699 aa9.65□□□□□ -0.87
SHQ1-203ENST00000463369 ECM29Q5VYK3 1845 aa9.64□□□□□ -0.87
SHQ1-203ENST00000463369 DYTNA2CJ06 578 aa9.64□□□□□ -0.87
SHQ1-203ENST00000463369 USP17L15C9J2P7 530 aa9.64□□□□□ -0.87
SHQ1-203ENST00000463369 USP17L10C9JJH3 530 aa9.64□□□□□ -0.87
SHQ1-203ENST00000463369 USP17L13C9JLJ4 530 aa9.64□□□□□ -0.87
SHQ1-203ENST00000463369 USP17L12C9JPN9 530 aa9.64□□□□□ -0.87
SHQ1-203ENST00000463369 USP17L11C9JVI0 530 aa9.64□□□□□ -0.87
SHQ1-203ENST00000463369 USP17L21D6R901 530 aa9.64□□□□□ -0.87
SHQ1-203ENST00000463369 USP17L18D6R9N7 530 aa9.64□□□□□ -0.87
SHQ1-203ENST00000463369 USP17L22D6RA61 530 aa9.64□□□□□ -0.87
SHQ1-203ENST00000463369 USP17L17D6RBQ6 530 aa9.64□□□□□ -0.87
SHQ1-203ENST00000463369 USP17L19D6RCP7 530 aa9.64□□□□□ -0.87
SHQ1-203ENST00000463369 GOLGA8KD6RF30 607 aa9.64□□□□□ -0.87
SHQ1-203ENST00000463369 USP17L20D6RJB6 530 aa9.64□□□□□ -0.87
SHQ1-203ENST00000463369 MFAP3LO75121 409 aa9.64□□□□□ -0.87
SHQ1-203ENST00000463369 CHGBP05060 677 aa9.64□□□□□ -0.87
SHQ1-203ENST00000463369 VDRP11473 427 aa9.64□□□□□ -0.87
SHQ1-203ENST00000463369 ZNF76P36508 570 aa9.64□□□□□ -0.87
SHQ1-203ENST00000463369 PBX1P40424 430 aa9.64□□□□□ -0.87
SHQ1-203ENST00000463369 USP17L24Q0WX57 530 aa9.64□□□□□ -0.87
SHQ1-203ENST00000463369 SEMA3FQ13275 785 aa9.64□□□□□ -0.87
SHQ1-203ENST00000463369 PTPAQ15257 358 aa9.64□□□□□ -0.87
SHQ1-203ENST00000463369 NT5DC1Q5TFE4 455 aa9.64□□□□□ -0.87
SHQ1-203ENST00000463369 CCDC174Q6PII3 467 aa9.64□□□□□ -0.87
SHQ1-203ENST00000463369 APTXQ7Z2E3 356 aaKnown RBP9.64□□□□□ -0.87
SHQ1-203ENST00000463369 YTHDF3Q7Z739 585 aaKnown RBP9.64□□□□□ -0.87
SHQ1-203ENST00000463369 ACRBPQ8NEB7 543 aa9.64□□□□□ -0.87
SHQ1-203ENST00000463369 N4BP2L2Q92802 583 aaPredicted RBP9.64□□□□□ -0.87
SHQ1-203ENST00000463369 GDAP1L1Q96MZ0 367 aa9.64□□□□□ -0.87
SHQ1-203ENST00000463369 MED15Q96RN5 788 aa9.64□□□□□ -0.87
SHQ1-203ENST00000463369 NBPF3Q9H094 633 aa9.64□□□□□ -0.87
SHQ1-203ENST00000463369 VPS33BQ9H267 617 aa9.64□□□□□ -0.87
SHQ1-203ENST00000463369 RABEP2Q9H5N1 569 aa9.64□□□□□ -0.87
SHQ1-203ENST00000463369 PIH1D3Q9NQM4 214 aaKnown RBP9.64□□□□□ -0.87
SHQ1-203ENST00000463369 KCNH3Q9ULD8 1083 aa9.64□□□□□ -0.87
SHQ1-203ENST00000463369 BCS1LQ9Y276 419 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms