RNA–Protein interactions for RNA: ENST00000463172.5

HDAC1-203, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-203ENST00000463172 DHX37Q8IY37 1157 aaKnown RBP15.1■□□□□ 0.01
HDAC1-203ENST00000463172 SRBD1Q8N5C6 995 aaKnown RBP15.1■□□□□ 0.01
HDAC1-203ENST00000463172 EHMT1Q9H9B1 1298 aa15.1■□□□□ 0.01
HDAC1-203ENST00000463172 TBX21Q9UL17 535 aa15.1■□□□□ 0.01
HDAC1-203ENST00000463172 EIF5BO60841 1220 aaKnown RBP15.09■□□□□ 0.01
HDAC1-203ENST00000463172 PLEKHA8P1O95397 391 aa15.09■□□□□ 0.01
HDAC1-203ENST00000463172 RXRAP19793 462 aa15.09■□□□□ 0.01
HDAC1-203ENST00000463172 HSPA4P34932 840 aa15.09■□□□□ 0.01
HDAC1-203ENST00000463172 EXOSC10Q01780 885 aaKnown RBP15.09■□□□□ 0.01
HDAC1-203ENST00000463172 PTPN11Q06124 597 aaPredicted RBP15.09■□□□□ 0.01
HDAC1-203ENST00000463172 DGKDQ16760 1214 aa15.09■□□□□ 0.01
HDAC1-203ENST00000463172 RTN1Q16799 776 aa15.09■□□□□ 0.01
HDAC1-203ENST00000463172 LY6KQ17RY6 165 aa15.09■□□□□ 0.01
HDAC1-203ENST00000463172 SLC35G1Q2M3R5 365 aa15.09■□□□□ 0.01
HDAC1-203ENST00000463172 TMEM63BQ5T3F8 832 aa15.09■□□□□ 0.01
HDAC1-203ENST00000463172 XRRA1Q6P2D8 792 aa15.09■□□□□ 0.01
HDAC1-203ENST00000463172 TEX2Q8IWB9 1127 aa15.09■□□□□ 0.01
HDAC1-203ENST00000463172 KATNAL1Q9BW62 490 aa15.09■□□□□ 0.01
HDAC1-203ENST00000463172 PSTPIP2Q9H939 334 aa15.09■□□□□ 0.01
HDAC1-203ENST00000463172 NAP1L2Q9ULW6 460 aaPredicted RBP15.09■□□□□ 0.01
HDAC1-203ENST00000463172 SCN10AQ9Y5Y9 1956 aa15.09■□□□□ 0.01
HDAC1-203ENST00000463172 hCG_1984214I3L0E3 225 aa15.08■□□□□ 0
HDAC1-203ENST00000463172 PIK3CDO00329 1044 aa15.08■□□□□ 0
HDAC1-203ENST00000463172 ARIH2O95376 493 aa15.08■□□□□ 0
HDAC1-203ENST00000463172 CD4P01730 458 aa15.08■□□□□ 0
HDAC1-203ENST00000463172 PSMC6P62333 389 aa15.08■□□□□ 0
HDAC1-203ENST00000463172 FAM47CQ5HY64 1035 aa15.08■□□□□ 0
HDAC1-203ENST00000463172 NFRKBQ6P4R8 1299 aa15.08■□□□□ 0
HDAC1-203ENST00000463172 RASEFQ8IZ41 740 aa15.08■□□□□ 0
HDAC1-203ENST00000463172 ZNF713Q8N859 430 aaPredicted RBP15.08■□□□□ 0
HDAC1-203ENST00000463172 COPS5Q92905 334 aa15.08■□□□□ 0
HDAC1-203ENST00000463172 KCNB2Q92953 911 aa15.08■□□□□ 0
HDAC1-203ENST00000463172 EMID1Q96A84 441 aaPredicted RBP15.08■□□□□ 0
HDAC1-203ENST00000463172 RNPC3Q96LT9 517 aaKnown RBP15.08■□□□□ 0
HDAC1-203ENST00000463172 JAKMIP1Q96N16 626 aaKnown RBP15.08■□□□□ 0
HDAC1-203ENST00000463172 GLT8D2Q9H1C3 349 aa15.08■□□□□ 0
HDAC1-203ENST00000463172 MTIF3Q9H2K0 278 aaKnown RBP15.08■□□□□ 0
HDAC1-203ENST00000463172 HIPK3Q9H422 1215 aa15.08■□□□□ 0
HDAC1-203ENST00000463172 DDX41Q9UJV9 622 aaKnown RBP15.08■□□□□ 0
HDAC1-203ENST00000463172 NOD1Q9Y239 953 aa15.08■□□□□ 0
HDAC1-203ENST00000463172 KLF18A0A0U1RQI7 1052 aa15.07■□□□□ 0
HDAC1-203ENST00000463172 SPDYE3A6NKU9 549 aa15.07■□□□□ 0
HDAC1-203ENST00000463172 GOLGA8AA7E2F4 631 aa15.07■□□□□ 0
HDAC1-203ENST00000463172 GOLGA8BA8MQT2 603 aa15.07■□□□□ 0
HDAC1-203ENST00000463172 SOX1O00570 391 aaPredicted RBP15.07■□□□□ 0
HDAC1-203ENST00000463172 MMP3P08254 477 aa15.07■□□□□ 0
HDAC1-203ENST00000463172 PTGS1P23219 599 aa15.07■□□□□ 0
HDAC1-203ENST00000463172 ARHGAP1Q07960 439 aa15.07■□□□□ 0
HDAC1-203ENST00000463172 SHHQ15465 462 aa15.07■□□□□ 0
HDAC1-203ENST00000463172 ADCK5Q3MIX3 580 aa15.07■□□□□ 0
HDAC1-203ENST00000463172 PSRC1Q6PGN9 363 aaPredicted RBP15.07■□□□□ 0
HDAC1-203ENST00000463172 HEATR3Q7Z4Q2 680 aa15.07■□□□□ 0
HDAC1-203ENST00000463172 NLRX1Q86UT6 975 aa15.07■□□□□ 0
HDAC1-203ENST00000463172 RAB11FIP4Q86YS3 637 aa15.07■□□□□ 0
HDAC1-203ENST00000463172 CCDC82Q8N4S0 544 aa15.07■□□□□ 0
HDAC1-203ENST00000463172 CCDC155Q8N6L0 562 aa15.07■□□□□ 0
HDAC1-203ENST00000463172 PPTC7Q8NI37 304 aa15.07■□□□□ 0
HDAC1-203ENST00000463172 AFG1LQ8WV93 481 aa15.07■□□□□ 0
HDAC1-203ENST00000463172 LRCH3Q96II8 777 aa15.07■□□□□ 0
HDAC1-203ENST00000463172 PPP1R12CQ9BZL4 782 aa15.07■□□□□ 0
HDAC1-203ENST00000463172 ALDH8A1Q9H2A2 487 aaPredicted RBP15.07■□□□□ 0
HDAC1-203ENST00000463172 MLXIPQ9HAP2 919 aa15.07■□□□□ 0
HDAC1-203ENST00000463172 CHMP4BP1P59074 171 aa15.06■□□□□ 0
HDAC1-203ENST00000463172 NEDD9Q14511 834 aa15.06■□□□□ 0
HDAC1-203ENST00000463172 NBPF20Q3BBV1 942 aa15.06■□□□□ 0
HDAC1-203ENST00000463172 PPP1R18Q6NYC8 613 aa15.06■□□□□ 0
HDAC1-203ENST00000463172 RPUSD2Q8IZ73 545 aaKnown RBP15.06■□□□□ 0
HDAC1-203ENST00000463172 CMTR1Q8N1G2 835 aaKnown RBP15.06■□□□□ 0
HDAC1-203ENST00000463172 CDHR1Q96JP9 859 aa15.06■□□□□ 0
HDAC1-203ENST00000463172 TCEANC2Q96MN5 208 aa15.06■□□□□ 0
HDAC1-203ENST00000463172 SNX14Q9Y5W7 946 aa15.06■□□□□ 0
HDAC1-203ENST00000463172 FRMPD4Q14CM0 1322 aa15.06■□□□□ 0
HDAC1-203ENST00000463172 LAMA3Q16787 3333 aa15.05■□□□□ 0
HDAC1-203ENST00000463172 NOP56O00567 594 aaKnown RBP15.05■□□□□ -0
HDAC1-203ENST00000463172 FIBPO43427 364 aa15.05■□□□□ -0
HDAC1-203ENST00000463172 B4GALT4O60513 344 aa15.05■□□□□ -0
HDAC1-203ENST00000463172 PPFIA4O75335 1185 aa15.05■□□□□ -0
HDAC1-203ENST00000463172 GGPS1O95749 300 aa15.05■□□□□ -0
HDAC1-203ENST00000463172 ITGB8P26012 769 aa15.05■□□□□ -0
HDAC1-203ENST00000463172 METAP2P50579 478 aaKnown RBP eCLIP15.05■□□□□ -0
HDAC1-203ENST00000463172 CELF3Q5SZQ8 465 aaKnown RBP15.05■□□□□ -0
HDAC1-203ENST00000463172 PCNX4Q63HM2 1172 aa15.05■□□□□ -0
HDAC1-203ENST00000463172 USP17L6PQ6QN14 398 aa15.05■□□□□ -0
HDAC1-203ENST00000463172 Q6ZUG5 572 aa15.05■□□□□ -0
HDAC1-203ENST00000463172 RETREG2Q8NC44 543 aa15.05■□□□□ -0
HDAC1-203ENST00000463172 GIMAP8Q8ND71 665 aaPredicted RBP15.05■□□□□ -0
HDAC1-203ENST00000463172 SPATA33Q96N06 139 aa15.05■□□□□ -0
HDAC1-203ENST00000463172 TRPV6Q9H1D0 765 aa15.05■□□□□ -0
HDAC1-203ENST00000463172 GRIN2DO15399 1336 aa15.05■□□□□ -0
HDAC1-203ENST00000463172 MEIS2O14770 477 aa15.04■□□□□ -0
HDAC1-203ENST00000463172 RPS6KB1P23443 525 aa15.04■□□□□ -0
HDAC1-203ENST00000463172 ICAM3P32942 547 aa15.04■□□□□ -0
HDAC1-203ENST00000463172 NAPAP54920 295 aa15.04■□□□□ -0
HDAC1-203ENST00000463172 SMAD3P84022 425 aaKnown RBP15.04■□□□□ -0
HDAC1-203ENST00000463172 AKAP17AQ02040 695 aaKnown RBP15.04■□□□□ -0
HDAC1-203ENST00000463172 BFSP2Q13515 415 aa15.04■□□□□ -0
HDAC1-203ENST00000463172 C9orf50Q5SZB4 431 aa15.04■□□□□ -0
HDAC1-203ENST00000463172 FBXL16Q8N461 479 aa15.04■□□□□ -0
HDAC1-203ENST00000463172 DEFB123Q8N688 67 aa15.04■□□□□ -0
HDAC1-203ENST00000463172 C7orf31Q8N865 590 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms