RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 ST13P4Q8IZP2 240 aaPredicted RBP17.2■□□□□ 0.34
SMC4-204ENST00000462787 GPKOWQ92917 476 aaPredicted RBP eCLIP17.2■□□□□ 0.342e-13■□□□□ 9.3
SMC4-204ENST00000462787 AP1M1Q9BXS5 423 aa17.2■□□□□ 0.34
SMC4-204ENST00000462787 ITIH6Q6UXX5 1313 aa17.2■□□□□ 0.34
SMC4-204ENST00000462787 PALMO75781 387 aa17.2■□□□□ 0.34
SMC4-204ENST00000462787 GUCY1A3Q02108 690 aa17.2■□□□□ 0.34
SMC4-204ENST00000462787 CTAGE3PQ8IX95 158 aa17.2■□□□□ 0.34
SMC4-204ENST00000462787 TC2NQ8N9U0 490 aa17.2■□□□□ 0.34
SMC4-204ENST00000462787 MMS19Q96T76 1030 aa17.2■□□□□ 0.34
SMC4-204ENST00000462787 PTPN22Q9Y2R2 807 aa17.2■□□□□ 0.34
SMC4-204ENST00000462787 TTC26A0AVF1 554 aa17.19■□□□□ 0.34
SMC4-204ENST00000462787 CTSWP56202 376 aa17.19■□□□□ 0.34
SMC4-204ENST00000462787 SEMA3FQ13275 785 aa17.19■□□□□ 0.34
SMC4-204ENST00000462787 GPHNQ9NQX3 736 aaPredicted RBP17.19■□□□□ 0.34
SMC4-204ENST00000462787 DNAJC5BQ9UF47 199 aa17.19■□□□□ 0.34
SMC4-204ENST00000462787 NLRP1Q9C000 1473 aa17.19■□□□□ 0.34
SMC4-204ENST00000462787 RASSF10A6NK89 507 aa17.19■□□□□ 0.34
SMC4-204ENST00000462787 PODXLO00592 558 aa17.19■□□□□ 0.34
SMC4-204ENST00000462787 ADORA1P30542 326 aa17.19■□□□□ 0.34
SMC4-204ENST00000462787 REXO1L1PQ8IX06 675 aa17.19■□□□□ 0.34
SMC4-204ENST00000462787 OGFOD1Q8N543 542 aa17.19■□□□□ 0.34
SMC4-204ENST00000462787 IFNB1P01574 187 aa17.19■□□□□ 0.34
SMC4-204ENST00000462787 PCCAP05165 728 aaPredicted RBP17.19■□□□□ 0.34
SMC4-204ENST00000462787 SERPINB6P35237 376 aa17.19■□□□□ 0.34
SMC4-204ENST00000462787 SMCR8Q8TEV9 937 aaPredicted RBP17.19■□□□□ 0.34
SMC4-204ENST00000462787 DISC1Q9NRI5 854 aa17.19■□□□□ 0.34
SMC4-204ENST00000462787 LRRC31Q6UY01 552 aa17.19■□□□□ 0.34
SMC4-204ENST00000462787 GJB4Q9NTQ9 266 aa17.19■□□□□ 0.34
SMC4-204ENST00000462787 GDAQ9Y2T3 454 aa17.19■□□□□ 0.34
SMC4-204ENST00000462787 POC1B-GALNT4F8VUJ3 575 aa17.18■□□□□ 0.34
SMC4-204ENST00000462787 CHMP2AO43633 222 aa17.18■□□□□ 0.34
SMC4-204ENST00000462787 PRR29P0C7W0 189 aa17.18■□□□□ 0.34
SMC4-204ENST00000462787 NFRKBQ6P4R8 1299 aa17.18■□□□□ 0.34
SMC4-204ENST00000462787 RSAD2Q8WXG1 361 aa17.18■□□□□ 0.34
SMC4-204ENST00000462787 IWS1Q96ST2 819 aa17.18■□□□□ 0.34
SMC4-204ENST00000462787 PUS7LQ9H0K6 701 aaKnown RBP17.18■□□□□ 0.34
SMC4-204ENST00000462787 NR2F2P24468 414 aa17.18■□□□□ 0.34
SMC4-204ENST00000462787 PSMD6Q15008 389 aa17.18■□□□□ 0.34
SMC4-204ENST00000462787 METTL16Q86W50 562 aaKnown RBP17.18■□□□□ 0.34
SMC4-204ENST00000462787 DDX23Q9BUQ8 820 aaKnown RBP17.18■□□□□ 0.34
SMC4-204ENST00000462787 SNX12Q9UMY4 172 aa17.18■□□□□ 0.34
SMC4-204ENST00000462787 PNPLA6Q8IY17 1366 aa17.18■□□□□ 0.34
SMC4-204ENST00000462787 MESDQ14696 234 aa17.18■□□□□ 0.34
SMC4-204ENST00000462787 SLFN12Q8IYM2 578 aa17.18■□□□□ 0.34
SMC4-204ENST00000462787 ARHGAP18Q8N392 663 aa17.18■□□□□ 0.34
SMC4-204ENST00000462787 PITPNM3Q9BZ71 974 aa17.18■□□□□ 0.34
SMC4-204ENST00000462787 MLXIPQ9HAP2 919 aa17.18■□□□□ 0.34
SMC4-204ENST00000462787 ZSWIM5Q9P217 1185 aa17.18■□□□□ 0.34
SMC4-204ENST00000462787 ANAPC5Q9UJX4 755 aa17.18■□□□□ 0.34
SMC4-204ENST00000462787 CAPN11Q9UMQ6 739 aa17.18■□□□□ 0.34
SMC4-204ENST00000462787 CUL4BQ13620 913 aa17.17■□□□□ 0.34
SMC4-204ENST00000462787 NR1I3Q14994 352 aa17.17■□□□□ 0.34
SMC4-204ENST00000462787 LRIG3Q6UXM1 1119 aa17.17■□□□□ 0.34
SMC4-204ENST00000462787 CADPS2Q86UW7 1296 aa17.17■□□□□ 0.34
SMC4-204ENST00000462787 SDR42E1Q8WUS8 393 aa17.17■□□□□ 0.34
SMC4-204ENST00000462787 TSPYL2Q9H2G4 693 aaPredicted RBP17.17■□□□□ 0.34
SMC4-204ENST00000462787 LIMA1Q9UHB6 759 aaKnown RBP17.17■□□□□ 0.34
SMC4-204ENST00000462787 CYP2J2P51589 502 aa17.17■□□□□ 0.34
SMC4-204ENST00000462787 PLCB4Q15147 1175 aa17.17■□□□□ 0.34
SMC4-204ENST00000462787 TMED2Q15363 201 aa17.17■□□□□ 0.34
SMC4-204ENST00000462787 ZBTB38Q8NAP3 1195 aaPredicted RBP17.17■□□□□ 0.34
SMC4-204ENST00000462787 PLEKHG1Q9ULL1 1385 aa17.17■□□□□ 0.34
SMC4-204ENST00000462787 DNAJC8O75937 253 aaPredicted RBP17.17■□□□□ 0.34
SMC4-204ENST00000462787 ZBTB17Q13105 803 aa17.17■□□□□ 0.34
SMC4-204ENST00000462787 TMTC3Q6ZXV5 915 aa17.17■□□□□ 0.34
SMC4-204ENST00000462787 GDAP1Q8TB36 358 aa17.17■□□□□ 0.34
SMC4-204ENST00000462787 KLRF2D3W0D1 207 aa17.16■□□□□ 0.34
SMC4-204ENST00000462787 ALKBH5Q6P6C2 394 aaKnown RBP17.16■□□□□ 0.34
SMC4-204ENST00000462787 CEP72Q9P209 647 aa17.16■□□□□ 0.34
SMC4-204ENST00000462787 SGO2Q562F6 1265 aa17.16■□□□□ 0.34
SMC4-204ENST00000462787 TPTE2Q6XPS3 522 aa17.16■□□□□ 0.34
SMC4-204ENST00000462787 LRRC1Q9BTT6 524 aa17.16■□□□□ 0.34
SMC4-204ENST00000462787 HAUS2Q9NVX0 235 aa17.16■□□□□ 0.34
SMC4-204ENST00000462787 ADAMTS1Q9UHI8 967 aa17.16■□□□□ 0.34
SMC4-204ENST00000462787 ZBTB21Q9ULJ3 1066 aa17.16■□□□□ 0.34
SMC4-204ENST00000462787 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.16■□□□□ 0.345e-7■■■■□ 23.7
SMC4-204ENST00000462787 SHROOM2Q13796 1616 aa17.16■□□□□ 0.34
SMC4-204ENST00000462787 IQGAP3Q86VI3 1631 aa17.16■□□□□ 0.34
SMC4-204ENST00000462787 CHGBP05060 677 aa17.16■□□□□ 0.34
SMC4-204ENST00000462787 PUS3Q9BZE2 481 aaKnown RBP17.16■□□□□ 0.34
SMC4-204ENST00000462787 FGFR1OP2Q9NVK5 253 aa17.16■□□□□ 0.34
SMC4-204ENST00000462787 PSMD14O00487 310 aa17.16■□□□□ 0.34
SMC4-204ENST00000462787 STK10O94804 968 aaKnown RBP17.16■□□□□ 0.34
SMC4-204ENST00000462787 LSP1P33241 339 aa17.16■□□□□ 0.34
SMC4-204ENST00000462787 ZNF449Q6P9G9 518 aa17.16■□□□□ 0.34
SMC4-204ENST00000462787 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.16■□□□□ 0.34
SMC4-204ENST00000462787 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.16■□□□□ 0.34
SMC4-204ENST00000462787 ZNF148Q9UQR1 794 aa17.16■□□□□ 0.34
SMC4-204ENST00000462787 AP5Z1O43299 807 aa17.15■□□□□ 0.34
SMC4-204ENST00000462787 PDE8BO95263 885 aa17.15■□□□□ 0.34
SMC4-204ENST00000462787 FGGP02679 453 aa17.15■□□□□ 0.34
SMC4-204ENST00000462787 GNPTABQ3T906 1256 aa17.15■□□□□ 0.34
SMC4-204ENST00000462787 WDR93Q6P2C0 686 aa17.15■□□□□ 0.34
SMC4-204ENST00000462787 MB21D2Q8IYB1 491 aaPredicted RBP17.15■□□□□ 0.34
SMC4-204ENST00000462787 KIFC2Q96AC6 838 aa17.15■□□□□ 0.34
SMC4-204ENST00000462787 ECT2Q9H8V3 914 aa17.15■□□□□ 0.34
SMC4-204ENST00000462787 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.15■□□□□ 0.34
SMC4-204ENST00000462787 NME8Q8N427 588 aa17.15■□□□□ 0.34
SMC4-204ENST00000462787 ENGASEQ8NFI3 743 aa17.15■□□□□ 0.34
SMC4-204ENST00000462787 ESYT3A0FGR9 886 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms