RNA–Protein interactions for RNA: ENST00000462254.1

CSMD3-205, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 2

Gene CSMD3, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-205ENST00000462254 C20orf194Q5TEA3 1177 aa5.76□□□□□ -1.49
CSMD3-205ENST00000462254 G2E3Q7L622 706 aa5.76□□□□□ -1.49
CSMD3-205ENST00000462254 C12orf40Q86WS4 652 aa5.76□□□□□ -1.49
CSMD3-205ENST00000462254 SHISA5Q8N114 240 aa5.76□□□□□ -1.49
CSMD3-205ENST00000462254 CELF2-AS1Q8N7Q2 184 aa5.76□□□□□ -1.49
CSMD3-205ENST00000462254 JMYQ8N9B5 988 aa5.76□□□□□ -1.49
CSMD3-205ENST00000462254 THAP3Q8WTV1 239 aaPredicted RBP5.76□□□□□ -1.49
CSMD3-205ENST00000462254 EZH1Q92800 747 aaPredicted RBP5.76□□□□□ -1.49
CSMD3-205ENST00000462254 SHDQ96IW2 340 aa5.76□□□□□ -1.49
CSMD3-205ENST00000462254 FMNL2Q96PY5 1086 aa5.76□□□□□ -1.49
CSMD3-205ENST00000462254 SEMA6CQ9H3T2 930 aa5.76□□□□□ -1.49
CSMD3-205ENST00000462254 ACSS3Q9H6R3 686 aa5.76□□□□□ -1.49
CSMD3-205ENST00000462254 PLAAQ9Y263 795 aa5.76□□□□□ -1.49
CSMD3-205ENST00000462254 HIF3AQ9Y2N7 669 aa5.76□□□□□ -1.49
CSMD3-205ENST00000462254 USP16Q9Y5T5 823 aa5.76□□□□□ -1.49
CSMD3-205ENST00000462254 PALLDQ8WX93 1383 aa5.76□□□□□ -1.49
CSMD3-205ENST00000462254 KIF16BQ96L93 1317 aa5.75□□□□□ -1.49
CSMD3-205ENST00000462254 LAMB2P55268 1798 aa5.75□□□□□ -1.49
CSMD3-205ENST00000462254 FAM95CA0A1B0GW59 222 aa5.75□□□□□ -1.49
CSMD3-205ENST00000462254 MINDY4BA8MYZ0 360 aa5.75□□□□□ -1.49
CSMD3-205ENST00000462254 SMAD7O15105 426 aaKnown RBP5.75□□□□□ -1.49
CSMD3-205ENST00000462254 GREM1O60565 184 aa5.75□□□□□ -1.49
CSMD3-205ENST00000462254 ANXA1P04083 346 aa5.75□□□□□ -1.49
CSMD3-205ENST00000462254 SNRPA1P09661 255 aaKnown RBP5.75□□□□□ -1.49
CSMD3-205ENST00000462254 TRIM27P14373 513 aa5.75□□□□□ -1.49
CSMD3-205ENST00000462254 GNALP38405 381 aa5.75□□□□□ -1.49
CSMD3-205ENST00000462254 PROSER3Q2NL68 480 aa5.75□□□□□ -1.49
CSMD3-205ENST00000462254 MAP9Q49MG5 647 aa5.75□□□□□ -1.49
CSMD3-205ENST00000462254 BRDTQ58F21 947 aaPredicted RBP5.75□□□□□ -1.49
CSMD3-205ENST00000462254 PPM1JQ5JR12 505 aa5.75□□□□□ -1.49
CSMD3-205ENST00000462254 CCDC30Q5VVM6 783 aa5.75□□□□□ -1.49
CSMD3-205ENST00000462254 LRFN4Q6PJG9 635 aa5.75□□□□□ -1.49
CSMD3-205ENST00000462254 TEX2Q8IWB9 1127 aa5.75□□□□□ -1.49
CSMD3-205ENST00000462254 JARID2Q92833 1246 aaPredicted RBP5.75□□□□□ -1.49
CSMD3-205ENST00000462254 FRAT1Q92837 279 aaPredicted RBP5.75□□□□□ -1.49
CSMD3-205ENST00000462254 RHOVQ96L33 236 aa5.75□□□□□ -1.49
CSMD3-205ENST00000462254 NOB1Q9ULX3 412 aaKnown RBP5.75□□□□□ -1.49
CSMD3-205ENST00000462254 ATP8A1Q9Y2Q0 1164 aa5.75□□□□□ -1.49
CSMD3-205ENST00000462254 LEMD3Q9Y2U8 911 aa5.75□□□□□ -1.49
CSMD3-205ENST00000462254 COMMD10Q9Y6G5 202 aa5.75□□□□□ -1.49
CSMD3-205ENST00000462254 PXDNLA1KZ92 1463 aa5.75□□□□□ -1.49
CSMD3-205ENST00000462254 COL24A1Q17RW2 1714 aa5.74□□□□□ -1.49
CSMD3-205ENST00000462254 DDX60Q8IY21 1712 aaKnown RBP5.74□□□□□ -1.49
CSMD3-205ENST00000462254 SPEF2Q9C093 1822 aa5.74□□□□□ -1.49
CSMD3-205ENST00000462254 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.74□□□□□ -1.49
CSMD3-205ENST00000462254 PF4P02776 101 aa5.74□□□□□ -1.49
CSMD3-205ENST00000462254 PMLP29590 882 aa5.74□□□□□ -1.49
CSMD3-205ENST00000462254 NTF4P34130 210 aa5.74□□□□□ -1.49
CSMD3-205ENST00000462254 PIP4K2AP48426 406 aaPredicted RBP5.74□□□□□ -1.49
CSMD3-205ENST00000462254 CDKN1CP49918 316 aaPredicted RBP5.74□□□□□ -1.49
CSMD3-205ENST00000462254 EPHB1P54762 984 aa5.74□□□□□ -1.49
CSMD3-205ENST00000462254 RING1Q06587 406 aa5.74□□□□□ -1.49
CSMD3-205ENST00000462254 NFKBIBQ15653 356 aa5.74□□□□□ -1.49
CSMD3-205ENST00000462254 DALRD3Q5D0E6 543 aaKnown RBP5.74□□□□□ -1.49
CSMD3-205ENST00000462254 ZKSCAN2Q63HK3 967 aa5.74□□□□□ -1.49
CSMD3-205ENST00000462254 SCARA3Q6AZY7 606 aa5.74□□□□□ -1.49
CSMD3-205ENST00000462254 FBXL19Q6PCT2 694 aa5.74□□□□□ -1.49
CSMD3-205ENST00000462254 FAM196AQ6ZSG2 479 aa5.74□□□□□ -1.49
CSMD3-205ENST00000462254 DNAJC10Q8IXB1 793 aa5.74□□□□□ -1.49
CSMD3-205ENST00000462254 PLPPR2Q96GM1 343 aa5.74□□□□□ -1.49
CSMD3-205ENST00000462254 MFSD14AQ96MC6 490 aa5.74□□□□□ -1.49
CSMD3-205ENST00000462254 APBA2Q99767 749 aa5.74□□□□□ -1.49
CSMD3-205ENST00000462254 MAF1Q9H063 256 aa5.74□□□□□ -1.49
CSMD3-205ENST00000462254 ATXN3LQ9H3M9 355 aa5.74□□□□□ -1.49
CSMD3-205ENST00000462254 PHAXQ9H814 394 aaKnown RBP5.74□□□□□ -1.49
CSMD3-205ENST00000462254 DAGLAQ9Y4D2 1042 aa5.74□□□□□ -1.49
CSMD3-205ENST00000462254 ABCC4O15439 1325 aa5.74□□□□□ -1.49
CSMD3-205ENST00000462254 ADCY9O60503 1353 aa5.73□□□□□ -1.49
CSMD3-205ENST00000462254 ALG1L2C9J202 215 aa5.73□□□□□ -1.49
CSMD3-205ENST00000462254 SH3BP5O60239 455 aa5.73□□□□□ -1.49
CSMD3-205ENST00000462254 RNGTTO60942 597 aaKnown RBP5.73□□□□□ -1.49
CSMD3-205ENST00000462254 CAND2O75155 1236 aa5.73□□□□□ -1.49
CSMD3-205ENST00000462254 LMNB1P20700 586 aa5.73□□□□□ -1.49
CSMD3-205ENST00000462254 GARTP22102 1010 aa5.73□□□□□ -1.49
CSMD3-205ENST00000462254 PAX3P23760 479 aa5.73□□□□□ -1.49
CSMD3-205ENST00000462254 ADMP35318 185 aa5.73□□□□□ -1.49
CSMD3-205ENST00000462254 ERVK-24P63145 666 aa5.73□□□□□ -1.49
CSMD3-205ENST00000462254 FAM160A1Q05DH4 1040 aa5.73□□□□□ -1.49
CSMD3-205ENST00000462254 NFIAQ12857 509 aa5.73□□□□□ -1.49
CSMD3-205ENST00000462254 OS9Q13438 667 aaPredicted RBP5.73□□□□□ -1.49
CSMD3-205ENST00000462254 CAMK2GQ13555 558 aaPredicted RBP5.73□□□□□ -1.49
CSMD3-205ENST00000462254 ITPK1Q13572 414 aa5.73□□□□□ -1.49
CSMD3-205ENST00000462254 NFE2Q16621 373 aaPredicted RBP5.73□□□□□ -1.49
CSMD3-205ENST00000462254 RNF43Q68DV7 783 aa5.73□□□□□ -1.49
CSMD3-205ENST00000462254 SEZ6L2Q6UXD5 910 aa5.73□□□□□ -1.49
CSMD3-205ENST00000462254 ATF7IPQ6VMQ6 1270 aa5.73□□□□□ -1.49
CSMD3-205ENST00000462254 BNC2Q6ZN30 1099 aaPredicted RBP5.73□□□□□ -1.49
CSMD3-205ENST00000462254 UBE3DQ7Z6J8 389 aa5.73□□□□□ -1.49
CSMD3-205ENST00000462254 JAMLQ86YT9 394 aa5.73□□□□□ -1.49
CSMD3-205ENST00000462254 SMYD4Q8IYR2 804 aaPredicted RBP5.73□□□□□ -1.49
CSMD3-205ENST00000462254 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.73□□□□□ -1.49
CSMD3-205ENST00000462254 PANK1Q8TE04 598 aa5.73□□□□□ -1.49
CSMD3-205ENST00000462254 SMARCC1Q92922 1105 aaPredicted RBP5.73□□□□□ -1.49
CSMD3-205ENST00000462254 CRBNQ96SW2 442 aa5.73□□□□□ -1.49
CSMD3-205ENST00000462254 STK31Q9BXU1 1019 aa5.73□□□□□ -1.49
CSMD3-205ENST00000462254 MIR1-1HGQ9H1L0 117 aa5.73□□□□□ -1.49
CSMD3-205ENST00000462254 DDX21Q9NR30 783 aaKnown RBP eCLIP5.73□□□□□ -1.49
CSMD3-205ENST00000462254 BSDC1Q9NW68 430 aaPredicted RBP5.73□□□□□ -1.49
CSMD3-205ENST00000462254 ACTR10Q9NZ32 417 aa5.73□□□□□ -1.49
CSMD3-205ENST00000462254 DBF4Q9UBU7 674 aaPredicted RBP5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms