RNA–Protein interactions for RNA: ENST00000462125.5

C9orf3-210, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 961 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-210ENST00000462125 MYL3P08590 195 aa15.28■□□□□ 0.04
C9orf3-210ENST00000462125 KRT32Q14532 448 aa15.28■□□□□ 0.04
C9orf3-210ENST00000462125 PGM5Q15124 567 aa15.28■□□□□ 0.04
C9orf3-210ENST00000462125 ADCK5Q3MIX3 580 aa15.28■□□□□ 0.04
C9orf3-210ENST00000462125 KCNV1Q6PIU1 500 aa15.28■□□□□ 0.04
C9orf3-210ENST00000462125 C16orf59Q7L2K0 433 aa15.28■□□□□ 0.04
C9orf3-210ENST00000462125 TMEM199Q8N511 208 aa15.28■□□□□ 0.04
C9orf3-210ENST00000462125 LRRC2Q9BYS8 371 aa15.28■□□□□ 0.04
C9orf3-210ENST00000462125 TRPV6Q9H1D0 765 aa15.28■□□□□ 0.04
C9orf3-210ENST00000462125 CUL9Q8IWT3 2517 aa15.27■□□□□ 0.04
C9orf3-210ENST00000462125 PIK3CDO00329 1044 aa15.27■□□□□ 0.04
C9orf3-210ENST00000462125 SUPT20HL2P0C7V6 817 aa15.27■□□□□ 0.04
C9orf3-210ENST00000462125 TGFB3P10600 412 aa15.27■□□□□ 0.04
C9orf3-210ENST00000462125 RXRAP19793 462 aa15.27■□□□□ 0.04
C9orf3-210ENST00000462125 PTPN11Q06124 597 aaPredicted RBP15.27■□□□□ 0.04
C9orf3-210ENST00000462125 LAMC2Q13753 1193 aa15.27■□□□□ 0.04
C9orf3-210ENST00000462125 NFRKBQ6P4R8 1299 aa15.27■□□□□ 0.04
C9orf3-210ENST00000462125 DEFB123Q8N688 67 aa15.27■□□□□ 0.04
C9orf3-210ENST00000462125 AFG1LQ8WV93 481 aa15.27■□□□□ 0.04
C9orf3-210ENST00000462125 FRMPD4Q14CM0 1322 aa15.26■□□□□ 0.03
C9orf3-210ENST00000462125 MEIS2O14770 477 aa15.26■□□□□ 0.03
C9orf3-210ENST00000462125 MMP3P08254 477 aa15.26■□□□□ 0.03
C9orf3-210ENST00000462125 HMGB1P09429 215 aaKnown RBP15.26■□□□□ 0.03
C9orf3-210ENST00000462125 MYCLP12524 364 aaPredicted RBP15.26■□□□□ 0.03
C9orf3-210ENST00000462125 CSF2RAP15509 400 aa15.26■□□□□ 0.03
C9orf3-210ENST00000462125 CYP2C18P33260 490 aa15.26■□□□□ 0.03
C9orf3-210ENST00000462125 HSPA4P34932 840 aa15.26■□□□□ 0.03
C9orf3-210ENST00000462125 SMAD3P84022 425 aaKnown RBP15.26■□□□□ 0.03
C9orf3-210ENST00000462125 PPIGQ13427 754 aaKnown RBP eCLIP15.26■□□□□ 0.032e-8■□□□□ 10.5
C9orf3-210ENST00000462125 NBPF20Q3BBV1 942 aa15.26■□□□□ 0.03
C9orf3-210ENST00000462125 APOA5Q6Q788 366 aa15.26■□□□□ 0.03
C9orf3-210ENST00000462125 SYNE3Q6ZMZ3 975 aa15.26■□□□□ 0.03
C9orf3-210ENST00000462125 TMTC3Q6ZXV5 915 aa15.26■□□□□ 0.03
C9orf3-210ENST00000462125 FCHSD1Q86WN1 690 aa15.26■□□□□ 0.03
C9orf3-210ENST00000462125 CMTR1Q8N1G2 835 aaKnown RBP15.26■□□□□ 0.03
C9orf3-210ENST00000462125 IL31RAQ8NI17 732 aa15.26■□□□□ 0.03
C9orf3-210ENST00000462125 PIBF1Q8WXW3 757 aa15.26■□□□□ 0.03
C9orf3-210ENST00000462125 NOC4LQ9BVI4 516 aaKnown RBP15.26■□□□□ 0.03
C9orf3-210ENST00000462125 HIPK3Q9H422 1215 aa15.26■□□□□ 0.03
C9orf3-210ENST00000462125 MTMR10Q9NXD2 777 aa15.26■□□□□ 0.03
C9orf3-210ENST00000462125 SEC63Q9UGP8 760 aaKnown RBP15.26■□□□□ 0.03
C9orf3-210ENST00000462125 MRVI1Q9Y6F6 885 aa15.26■□□□□ 0.03
C9orf3-210ENST00000462125 STAM2O75886 525 aa15.25■□□□□ 0.03
C9orf3-210ENST00000462125 CASTP20810 708 aaKnown RBP15.25■□□□□ 0.03
C9orf3-210ENST00000462125 CCND2P30279 289 aa15.25■□□□□ 0.03
C9orf3-210ENST00000462125 MRPS9P82933 396 aaKnown RBP15.25■□□□□ 0.03
C9orf3-210ENST00000462125 TMEM240Q5SV17 173 aa15.25■□□□□ 0.03
C9orf3-210ENST00000462125 RASIP1Q5U651 963 aa15.25■□□□□ 0.03
C9orf3-210ENST00000462125 MYSM1Q5VVJ2 828 aa15.25■□□□□ 0.03
C9orf3-210ENST00000462125 Q7L0L9 218 aa15.25■□□□□ 0.03
C9orf3-210ENST00000462125 SESTD1Q86VW0 696 aa15.25■□□□□ 0.03
C9orf3-210ENST00000462125 KAT2BQ92831 832 aa15.25■□□□□ 0.03
C9orf3-210ENST00000462125 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.25■□□□□ 0.033e-10■■■□□ 15.8
C9orf3-210ENST00000462125 PPP1R12CQ9BZL4 782 aa15.25■□□□□ 0.03
C9orf3-210ENST00000462125 BRPF3Q9ULD4 1205 aa15.25■□□□□ 0.03
C9orf3-210ENST00000462125 UMODL1Q5DID0 1318 aa15.24■□□□□ 0.03
C9orf3-210ENST00000462125 EPB41L2O43491 1005 aaKnown RBP15.24■□□□□ 0.03
C9orf3-210ENST00000462125 PPFIA4O75335 1185 aa15.24■□□□□ 0.03
C9orf3-210ENST00000462125 HOXD8P13378 290 aaPredicted RBP15.24■□□□□ 0.03
C9orf3-210ENST00000462125 ICAM3P32942 547 aa15.24■□□□□ 0.03
C9orf3-210ENST00000462125 SP2Q02086 613 aa15.24■□□□□ 0.03
C9orf3-210ENST00000462125 FUT2Q10981 343 aa15.24■□□□□ 0.03
C9orf3-210ENST00000462125 DGKDQ16760 1214 aa15.24■□□□□ 0.03
C9orf3-210ENST00000462125 CELF3Q5SZQ8 465 aaKnown RBP15.24■□□□□ 0.03
C9orf3-210ENST00000462125 USP17L6PQ6QN14 398 aa15.24■□□□□ 0.03
C9orf3-210ENST00000462125 DHX37Q8IY37 1157 aaKnown RBP15.24■□□□□ 0.03
C9orf3-210ENST00000462125 FBXL16Q8N461 479 aa15.24■□□□□ 0.03
C9orf3-210ENST00000462125 CCDC82Q8N4S0 544 aa15.24■□□□□ 0.03
C9orf3-210ENST00000462125 PPTC7Q8NI37 304 aa15.24■□□□□ 0.03
C9orf3-210ENST00000462125 RNPC3Q96LT9 517 aaKnown RBP15.24■□□□□ 0.03
C9orf3-210ENST00000462125 TCEANC2Q96MN5 208 aa15.24■□□□□ 0.03
C9orf3-210ENST00000462125 INPP4AQ96PE3 977 aaPredicted RBP15.24■□□□□ 0.03
C9orf3-210ENST00000462125 IL23AQ9NPF7 189 aa15.24■□□□□ 0.03
C9orf3-210ENST00000462125 TRMT13Q9NUP7 481 aaKnown RBP15.24■□□□□ 0.03
C9orf3-210ENST00000462125 RBM28Q9NW13 759 aaKnown RBP15.24■□□□□ 0.03
C9orf3-210ENST00000462125 SCN10AQ9Y5Y9 1956 aa15.24■□□□□ 0.03
C9orf3-210ENST00000462125 UNC80Q8N2C7 3258 aa15.23■□□□□ 0.03
C9orf3-210ENST00000462125 KIAA1217Q5T5P2 1943 aa15.23■□□□□ 0.03
C9orf3-210ENST00000462125 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.23■□□□□ 0.03
C9orf3-210ENST00000462125 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.23■□□□□ 0.03
C9orf3-210ENST00000462125 SPATA31C2B4DYI2 1134 aa15.23■□□□□ 0.03
C9orf3-210ENST00000462125 RCAN1P53805 252 aa15.23■□□□□ 0.03
C9orf3-210ENST00000462125 XRRA1Q6P2D8 792 aa15.23■□□□□ 0.03
C9orf3-210ENST00000462125 ZNF365Q70YC5 407 aa15.23■□□□□ 0.03
C9orf3-210ENST00000462125 MICU3Q86XE3 530 aa15.23■□□□□ 0.03
C9orf3-210ENST00000462125 RAB11FIP4Q86YS3 637 aa15.23■□□□□ 0.03
C9orf3-210ENST00000462125 SMARCC2Q8TAQ2 1214 aa15.23■□□□□ 0.03
C9orf3-210ENST00000462125 CUL5Q93034 780 aa15.23■□□□□ 0.03
C9orf3-210ENST00000462125 WNT8AQ9H1J5 351 aa15.23■□□□□ 0.03
C9orf3-210ENST00000462125 PSTPIP2Q9H939 334 aa15.23■□□□□ 0.03
C9orf3-210ENST00000462125 FAM217BQ9NTX9 383 aaPredicted RBP15.23■□□□□ 0.03
C9orf3-210ENST00000462125 SNX14Q9Y5W7 946 aa15.23■□□□□ 0.03
C9orf3-210ENST00000462125 HAS3O00219 553 aa15.22■□□□□ 0.03
C9orf3-210ENST00000462125 ZBTB43O43298 467 aa15.22■□□□□ 0.03
C9orf3-210ENST00000462125 REC8O95072 547 aa15.22■□□□□ 0.03
C9orf3-210ENST00000462125 ACRP10323 421 aa15.22■□□□□ 0.03
C9orf3-210ENST00000462125 CYP2C9P11712 490 aa15.22■□□□□ 0.03
C9orf3-210ENST00000462125 CCL23P55773 120 aa15.22■□□□□ 0.03
C9orf3-210ENST00000462125 HSDL1Q3SXM5 330 aa15.22■□□□□ 0.03
C9orf3-210ENST00000462125 GNPTABQ3T906 1256 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms