RNA–Protein interactions for RNA: ENST00000462122.1

TRAF3IP1-204, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 922 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-204ENST00000462122 MYCLP12524 364 aaPredicted RBP13.34□□□□□ -0.27
TRAF3IP1-204ENST00000462122 ADCYAP1R1P41586 468 aa13.34□□□□□ -0.27
TRAF3IP1-204ENST00000462122 TNFAIP2Q03169 654 aa13.34□□□□□ -0.27
TRAF3IP1-204ENST00000462122 TTLL4Q14679 1199 aa13.34□□□□□ -0.27
TRAF3IP1-204ENST00000462122 GNPTABQ3T906 1256 aa13.34□□□□□ -0.27
TRAF3IP1-204ENST00000462122 KCNV1Q6PIU1 500 aa13.34□□□□□ -0.27
TRAF3IP1-204ENST00000462122 SHISA4Q96DD7 197 aa13.34□□□□□ -0.27
TRAF3IP1-204ENST00000462122 PHF20Q9BVI0 1012 aa13.34□□□□□ -0.27
TRAF3IP1-204ENST00000462122 XPNPEP3Q9NQH7 507 aa13.34□□□□□ -0.27
TRAF3IP1-204ENST00000462122 KIF3AQ9Y496 699 aa13.34□□□□□ -0.27
TRAF3IP1-204ENST00000462122 NKRFO15226 690 aaKnown RBP eCLIP13.33□□□□□ -0.28
TRAF3IP1-204ENST00000462122 SREBF1P36956 1147 aa13.33□□□□□ -0.28
TRAF3IP1-204ENST00000462122 TRIM29Q14134 588 aa13.33□□□□□ -0.28
TRAF3IP1-204ENST00000462122 DUSP28Q4G0W2 176 aa13.33□□□□□ -0.28
TRAF3IP1-204ENST00000462122 JAKMIP3Q5VZ66 844 aa13.33□□□□□ -0.28
TRAF3IP1-204ENST00000462122 BLIDQ8IZY5 108 aa13.33□□□□□ -0.28
TRAF3IP1-204ENST00000462122 FAM184AQ8NB25 1140 aa13.33□□□□□ -0.28
TRAF3IP1-204ENST00000462122 ARRDC4Q8NCT1 418 aa13.33□□□□□ -0.28
TRAF3IP1-204ENST00000462122 IL31RAQ8NI17 732 aa13.33□□□□□ -0.28
TRAF3IP1-204ENST00000462122 INPP4AQ96PE3 977 aaPredicted RBP13.33□□□□□ -0.28
TRAF3IP1-204ENST00000462122 WDR11Q9BZH6 1224 aa13.33□□□□□ -0.28
TRAF3IP1-204ENST00000462122 SPC25Q9HBM1 224 aa13.33□□□□□ -0.28
TRAF3IP1-204ENST00000462122 BRMS1Q9HCU9 246 aa13.33□□□□□ -0.28
TRAF3IP1-204ENST00000462122 PDGFCQ9NRA1 345 aa13.33□□□□□ -0.28
TRAF3IP1-204ENST00000462122 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.33□□□□□ -0.28
TRAF3IP1-204ENST00000462122 KIAA0100Q14667 2235 aaKnown RBP13.33□□□□□ -0.28
TRAF3IP1-204ENST00000462122 MCM3APO60318 1980 aa13.32□□□□□ -0.28
TRAF3IP1-204ENST00000462122 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.32□□□□□ -0.28
TRAF3IP1-204ENST00000462122 TGFB3P10600 412 aa13.32□□□□□ -0.28
TRAF3IP1-204ENST00000462122 SMPD1P17405 629 aa13.32□□□□□ -0.28
TRAF3IP1-204ENST00000462122 EN2P19622 333 aaPredicted RBP13.32□□□□□ -0.28
TRAF3IP1-204ENST00000462122 MRPS9P82933 396 aaKnown RBP13.32□□□□□ -0.28
TRAF3IP1-204ENST00000462122 ANO1Q5XXA6 986 aa13.32□□□□□ -0.28
TRAF3IP1-204ENST00000462122 SEPT14Q6ZU15 432 aa13.32□□□□□ -0.28
TRAF3IP1-204ENST00000462122 RNF180Q86T96 592 aa13.32□□□□□ -0.28
TRAF3IP1-204ENST00000462122 SNX21Q969T3 373 aa13.32□□□□□ -0.28
TRAF3IP1-204ENST00000462122 TMEM260Q9NX78 707 aa13.32□□□□□ -0.28
TRAF3IP1-204ENST00000462122 KCNJ14Q9UNX9 436 aa13.32□□□□□ -0.28
TRAF3IP1-204ENST00000462122 GNEQ9Y223 722 aaKnown RBP13.32□□□□□ -0.28
TRAF3IP1-204ENST00000462122 Q9Y3F1 56 aa13.32□□□□□ -0.28
TRAF3IP1-204ENST00000462122 MRVI1Q9Y6F6 885 aa13.32□□□□□ -0.28
TRAF3IP1-204ENST00000462122 K7ELQ4 463 aaPredicted RBP13.31□□□□□ -0.28
TRAF3IP1-204ENST00000462122 M0R2N6 131 aa13.31□□□□□ -0.28
TRAF3IP1-204ENST00000462122 DNM1LO00429 736 aa13.31□□□□□ -0.28
TRAF3IP1-204ENST00000462122 MAFGO15525 162 aa13.31□□□□□ -0.28
TRAF3IP1-204ENST00000462122 ADCY6O43306 1168 aa13.31□□□□□ -0.28
TRAF3IP1-204ENST00000462122 FIBPO43427 364 aa13.31□□□□□ -0.28
TRAF3IP1-204ENST00000462122 DTNBO60941 627 aa13.31□□□□□ -0.28
TRAF3IP1-204ENST00000462122 RGS20O76081 388 aa13.31□□□□□ -0.28
TRAF3IP1-204ENST00000462122 TXNP10599 105 aaKnown RBP13.31□□□□□ -0.28
TRAF3IP1-204ENST00000462122 ICAM3P32942 547 aa13.31□□□□□ -0.28
TRAF3IP1-204ENST00000462122 GJA9P57773 515 aa13.31□□□□□ -0.28
TRAF3IP1-204ENST00000462122 ARHGAP4P98171 946 aa13.31□□□□□ -0.28
TRAF3IP1-204ENST00000462122 CUL4AQ13619 759 aa13.31□□□□□ -0.28
TRAF3IP1-204ENST00000462122 NPY5RQ15761 445 aa13.31□□□□□ -0.28
TRAF3IP1-204ENST00000462122 TLK2Q86UE8 772 aa13.31□□□□□ -0.28
TRAF3IP1-204ENST00000462122 NLRX1Q86UT6 975 aa13.31□□□□□ -0.28
TRAF3IP1-204ENST00000462122 RASGRP4Q8TDF6 673 aa13.31□□□□□ -0.28
TRAF3IP1-204ENST00000462122 LENG1Q96BZ8 264 aaPredicted RBP13.31□□□□□ -0.28
TRAF3IP1-204ENST00000462122 GPRASP2Q96D09 838 aa13.31□□□□□ -0.28
TRAF3IP1-204ENST00000462122 CDHR1Q96JP9 859 aa13.31□□□□□ -0.28
TRAF3IP1-204ENST00000462122 PGBD1Q96JS3 809 aa13.31□□□□□ -0.28
TRAF3IP1-204ENST00000462122 C8orf76Q96K31 380 aa13.31□□□□□ -0.28
TRAF3IP1-204ENST00000462122 UPF3AQ9H1J1 476 aaKnown RBP13.31□□□□□ -0.28
TRAF3IP1-204ENST00000462122 SYNRGQ9UMZ2 1314 aa13.31□□□□□ -0.28
TRAF3IP1-204ENST00000462122 MKI67P46013 3256 aaKnown RBP13.3□□□□□ -0.28
TRAF3IP1-204ENST00000462122 KBTBD13C9JR72 458 aa13.3□□□□□ -0.28
TRAF3IP1-204ENST00000462122 ADAMTS4O75173 837 aa13.3□□□□□ -0.28
TRAF3IP1-204ENST00000462122 CAPN15O75808 1086 aa13.3□□□□□ -0.28
TRAF3IP1-204ENST00000462122 FARP2O94887 1054 aaPredicted RBP13.3□□□□□ -0.28
TRAF3IP1-204ENST00000462122 MMP1P03956 469 aa13.3□□□□□ -0.28
TRAF3IP1-204ENST00000462122 CYP3A4P08684 503 aa13.3□□□□□ -0.28
TRAF3IP1-204ENST00000462122 CST5P28325 142 aaPredicted RBP13.3□□□□□ -0.28
TRAF3IP1-204ENST00000462122 KRT2P35908 639 aa13.3□□□□□ -0.28
TRAF3IP1-204ENST00000462122 NKX3-2P78367 333 aa13.3□□□□□ -0.28
TRAF3IP1-204ENST00000462122 LRRC41Q15345 812 aa13.3□□□□□ -0.28
TRAF3IP1-204ENST00000462122 SAFBQ15424 915 aaKnown RBP eCLIP13.3□□□□□ -0.28
TRAF3IP1-204ENST00000462122 KRT40Q6A162 431 aa13.3□□□□□ -0.28
TRAF3IP1-204ENST00000462122 CCDC62Q6P9F0 684 aa13.3□□□□□ -0.28
TRAF3IP1-204ENST00000462122 KRT25Q7Z3Z0 450 aa13.3□□□□□ -0.28
TRAF3IP1-204ENST00000462122 HSCBQ8IWL3 235 aa13.3□□□□□ -0.28
TRAF3IP1-204ENST00000462122 CRYGNQ8WXF5 182 aa13.3□□□□□ -0.28
TRAF3IP1-204ENST00000462122 AP5M1Q9H0R1 490 aa13.3□□□□□ -0.28
TRAF3IP1-204ENST00000462122 GJB4Q9NTQ9 266 aa13.3□□□□□ -0.28
TRAF3IP1-204ENST00000462122 RTEL1Q9NZ71 1219 aa13.3□□□□□ -0.28
TRAF3IP1-204ENST00000462122 DDX41Q9UJV9 622 aaKnown RBP13.3□□□□□ -0.28
TRAF3IP1-204ENST00000462122 SMC3Q9UQE7 1217 aa13.3□□□□□ -0.28
TRAF3IP1-204ENST00000462122 UBIAD1Q9Y5Z9 338 aa13.3□□□□□ -0.28
TRAF3IP1-204ENST00000462122 FRMPD3Q5JV73 1810 aa13.29□□□□□ -0.28
TRAF3IP1-204ENST00000462122 SPATA31C2B4DYI2 1134 aa13.29□□□□□ -0.28
TRAF3IP1-204ENST00000462122 ADAMTS3O15072 1205 aa13.29□□□□□ -0.28
TRAF3IP1-204ENST00000462122 ARIH2O95376 493 aa13.29□□□□□ -0.28
TRAF3IP1-204ENST00000462122 PGK1P00558 417 aa13.29□□□□□ -0.28
TRAF3IP1-204ENST00000462122 GH1P01241 217 aa13.29□□□□□ -0.28
TRAF3IP1-204ENST00000462122 C6orf222P0C671 652 aaPredicted RBP13.29□□□□□ -0.28
TRAF3IP1-204ENST00000462122 MTMR1Q13613 665 aa13.29□□□□□ -0.28
TRAF3IP1-204ENST00000462122 NONOQ15233 471 aaKnown RBP eCLIP13.29□□□□□ -0.28
TRAF3IP1-204ENST00000462122 CEP55Q53EZ4 464 aa13.29□□□□□ -0.28
TRAF3IP1-204ENST00000462122 BRDTQ58F21 947 aaPredicted RBP13.29□□□□□ -0.28
TRAF3IP1-204ENST00000462122 NIPA1Q7RTP0 329 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms