RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 CCL23P55773 120 aa21.94■■□□□ 1.1
VARS-220ENST00000461874 FAM47CQ5HY64 1035 aa21.94■■□□□ 1.1
VARS-220ENST00000461874 VSIG10LQ86VR7 867 aa21.94■■□□□ 1.1
VARS-220ENST00000461874 SPZ1Q9BXG8 430 aa21.94■■□□□ 1.1
VARS-220ENST00000461874 WNT8AQ9H1J5 351 aa21.94■■□□□ 1.1
VARS-220ENST00000461874 RGS20O76081 388 aa21.93■■□□□ 1.1
VARS-220ENST00000461874 MMP3P08254 477 aa21.93■■□□□ 1.1
VARS-220ENST00000461874 MYCLP12524 364 aaPredicted RBP21.93■■□□□ 1.1
VARS-220ENST00000461874 LIFRP42702 1097 aa21.93■■□□□ 1.1
VARS-220ENST00000461874 PTPN11Q06124 597 aaPredicted RBP21.93■■□□□ 1.1
VARS-220ENST00000461874 PGM5Q15124 567 aa21.93■■□□□ 1.1
VARS-220ENST00000461874 NFXL1Q6ZNB6 911 aa21.93■■□□□ 1.1
VARS-220ENST00000461874 PIBF1Q8WXW3 757 aa21.93■■□□□ 1.1
VARS-220ENST00000461874 EMID1Q96A84 441 aaPredicted RBP21.93■■□□□ 1.1
VARS-220ENST00000461874 LZTS2Q9BRK4 669 aa21.93■■□□□ 1.1
VARS-220ENST00000461874 TTYH1Q9H313 450 aaPredicted RBP21.93■■□□□ 1.1
VARS-220ENST00000461874 SCN10AQ9Y5Y9 1956 aa21.93■■□□□ 1.1
VARS-220ENST00000461874 MRVI1Q9Y6F6 885 aa21.93■■□□□ 1.1
VARS-220ENST00000461874 CCDC69A6NI79 296 aa21.92■■□□□ 1.1
VARS-220ENST00000461874 CYP2C9P11712 490 aa21.92■■□□□ 1.1
VARS-220ENST00000461874 GNAQP50148 359 aa21.92■■□□□ 1.1
VARS-220ENST00000461874 FCHSD1Q86WN1 690 aa21.92■■□□□ 1.1
VARS-220ENST00000461874 IL31RAQ8NI17 732 aa21.92■■□□□ 1.1
VARS-220ENST00000461874 PPP1R13LQ8WUF5 828 aa21.92■■□□□ 1.1
VARS-220ENST00000461874 HERVK_113Q902F9 699 aa21.92■■□□□ 1.1
VARS-220ENST00000461874 RRP36Q96EU6 259 aaKnown RBP21.92■■□□□ 1.1
VARS-220ENST00000461874 TMEM265A0A087WTH1 108 aa21.91■■□□□ 1.1
VARS-220ENST00000461874 FGBP02675 491 aa21.91■■□□□ 1.1
VARS-220ENST00000461874 CASTP20810 708 aaKnown RBP21.91■■□□□ 1.1
VARS-220ENST00000461874 LAMC2Q13753 1193 aa21.91■■□□□ 1.1
VARS-220ENST00000461874 KCNV1Q6PIU1 500 aa21.91■■□□□ 1.1
VARS-220ENST00000461874 SLC17A8Q8NDX2 589 aa21.91■■□□□ 1.1
VARS-220ENST00000461874 KAT2BQ92831 832 aa21.91■■□□□ 1.1
VARS-220ENST00000461874 CDX2Q99626 313 aaPredicted RBP21.91■■□□□ 1.1
VARS-220ENST00000461874 CALM1P0DP23 149 aa21.9■■□□□ 1.1
VARS-220ENST00000461874 CALM2P0DP24 149 aa21.9■■□□□ 1.1
VARS-220ENST00000461874 CALM3P0DP25 149 aa21.9■■□□□ 1.1
VARS-220ENST00000461874 CCND2P30279 289 aa21.9■■□□□ 1.1
VARS-220ENST00000461874 DGKDQ16760 1214 aa21.9■■□□□ 1.1
VARS-220ENST00000461874 RNF20Q5VTR2 975 aa21.9■■□□□ 1.1
VARS-220ENST00000461874 DHX37Q8IY37 1157 aaKnown RBP21.9■■□□□ 1.1
VARS-220ENST00000461874 RPUSD2Q8IZ73 545 aaKnown RBP21.9■■□□□ 1.1
VARS-220ENST00000461874 SRBD1Q8N5C6 995 aaKnown RBP21.9■■□□□ 1.1
VARS-220ENST00000461874 SCLYQ96I15 445 aa21.9■■□□□ 1.1
VARS-220ENST00000461874 CDC45O75419 566 aa21.89■■□□□ 1.09
VARS-220ENST00000461874 PLEKHA8P1O95397 391 aa21.89■■□□□ 1.09
VARS-220ENST00000461874 DNAJB2P25686 324 aa21.89■■□□□ 1.09
VARS-220ENST00000461874 CHMP4BP1P59074 171 aa21.89■■□□□ 1.09
VARS-220ENST00000461874 PPTC7Q8NI37 304 aa21.89■■□□□ 1.09
VARS-220ENST00000461874 VWCEQ96DN2 955 aa21.89■■□□□ 1.09
VARS-220ENST00000461874 LRRC2Q9BYS8 371 aa21.89■■□□□ 1.09
VARS-220ENST00000461874 CXXC1Q9P0U4 656 aaPredicted RBP21.89■■□□□ 1.09
VARS-220ENST00000461874 SEC63Q9UGP8 760 aaKnown RBP21.89■■□□□ 1.09
VARS-220ENST00000461874 SLC12A7Q9Y666 1083 aa21.89■■□□□ 1.09
VARS-220ENST00000461874 GRXCR1A8MXD5 290 aa21.88■■□□□ 1.09
VARS-220ENST00000461874 TGFB3P10600 412 aa21.88■■□□□ 1.09
VARS-220ENST00000461874 RXRAP19793 462 aa21.88■■□□□ 1.09
VARS-220ENST00000461874 CELF3Q5SZQ8 465 aaKnown RBP21.88■■□□□ 1.09
VARS-220ENST00000461874 MYSM1Q5VVJ2 828 aa21.88■■□□□ 1.09
VARS-220ENST00000461874 SESTD1Q86VW0 696 aa21.88■■□□□ 1.09
VARS-220ENST00000461874 SGMS1Q86VZ5 419 aa21.88■■□□□ 1.09
VARS-220ENST00000461874 ZFP91Q96JP5 570 aaPredicted RBP21.88■■□□□ 1.09
VARS-220ENST00000461874 MTIF3Q9H2K0 278 aaKnown RBP21.88■■□□□ 1.09
VARS-220ENST00000461874 KIAA1217Q5T5P2 1943 aa21.88■■□□□ 1.09
VARS-220ENST00000461874 FRMPD4Q14CM0 1322 aa21.87■■□□□ 1.09
VARS-220ENST00000461874 HOXD8P13378 290 aaPredicted RBP21.87■■□□□ 1.09
VARS-220ENST00000461874 SP2Q02086 613 aa21.87■■□□□ 1.09
VARS-220ENST00000461874 TSGA10IPQ3SY00 556 aa21.87■■□□□ 1.09
VARS-220ENST00000461874 OTOP2Q7RTS6 562 aa21.87■■□□□ 1.09
VARS-220ENST00000461874 CMTR1Q8N1G2 835 aaKnown RBP21.87■■□□□ 1.09
VARS-220ENST00000461874 FANCBQ8NB91 859 aa21.87■■□□□ 1.09
VARS-220ENST00000461874 TIFAQ96CG3 184 aa21.87■■□□□ 1.09
VARS-220ENST00000461874 NEK1Q96PY6 1258 aa21.87■■□□□ 1.09
VARS-220ENST00000461874 CDH23Q9H251 3354 aa21.87■■□□□ 1.09
VARS-220ENST00000461874 A0A0C4DFX4 3053 aa21.86■■□□□ 1.09
VARS-220ENST00000461874 PIK3CDO00329 1044 aa21.86■■□□□ 1.09
VARS-220ENST00000461874 PITPNM1O00562 1244 aa21.86■■□□□ 1.09
VARS-220ENST00000461874 MRPS9P82933 396 aaKnown RBP21.86■■□□□ 1.09
VARS-220ENST00000461874 PTGISQ16647 500 aa21.86■■□□□ 1.09
VARS-220ENST00000461874 RAB11FIP4Q86YS3 637 aa21.86■■□□□ 1.09
VARS-220ENST00000461874 GPKOWQ92917 476 aaPredicted RBP eCLIP21.86■■□□□ 1.09
VARS-220ENST00000461874 PBX4Q9BYU1 374 aa21.86■■□□□ 1.09
VARS-220ENST00000461874 NOD1Q9Y239 953 aa21.86■■□□□ 1.09
VARS-220ENST00000461874 MEIS2O14770 477 aa21.85■■□□□ 1.09
VARS-220ENST00000461874 PPFIA4O75335 1185 aa21.85■■□□□ 1.09
VARS-220ENST00000461874 STAM2O75886 525 aa21.85■■□□□ 1.09
VARS-220ENST00000461874 GGPS1O95749 300 aa21.85■■□□□ 1.09
VARS-220ENST00000461874 F2P00734 622 aa21.85■■□□□ 1.09
VARS-220ENST00000461874 PFKMP08237 780 aa21.85■■□□□ 1.09
VARS-220ENST00000461874 UBA1P22314 1058 aaKnown RBP21.85■■□□□ 1.09
VARS-220ENST00000461874 PBX2P40425 430 aa21.85■■□□□ 1.09
VARS-220ENST00000461874 PSEN2P49810 448 aa21.85■■□□□ 1.09
VARS-220ENST00000461874 EXOSC10Q01780 885 aaKnown RBP21.85■■□□□ 1.09
VARS-220ENST00000461874 BFSP2Q13515 415 aa21.85■■□□□ 1.09
VARS-220ENST00000461874 HSDL1Q3SXM5 330 aa21.85■■□□□ 1.09
VARS-220ENST00000461874 GDF6Q6KF10 455 aaPredicted RBP21.85■■□□□ 1.09
VARS-220ENST00000461874 USP17L6PQ6QN14 398 aa21.85■■□□□ 1.09
VARS-220ENST00000461874 TMTC3Q6ZXV5 915 aa21.85■■□□□ 1.09
VARS-220ENST00000461874 RASEFQ8IZ41 740 aa21.85■■□□□ 1.09
VARS-220ENST00000461874 RETREG2Q8NC44 543 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms