RNA–Protein interactions for RNA: ENST00000461489.1

COL21A1-205, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 4

Gene COL21A1, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-205ENST00000461489 SYT3Q9BQG1 590 aa6.35□□□□□ -1.39
COL21A1-205ENST00000461489 LGR4Q9BXB1 951 aa6.35□□□□□ -1.39
COL21A1-205ENST00000461489 NKX2-4Q9H2Z4 354 aa6.35□□□□□ -1.39
COL21A1-205ENST00000461489 SMPD4Q9NXE4 827 aa6.35□□□□□ -1.39
COL21A1-205ENST00000461489 FPR2P25090 351 aa6.34□□□□□ -1.39
COL21A1-205ENST00000461489 MROH9Q5TGP6 573 aa6.34□□□□□ -1.39
COL21A1-205ENST00000461489 MILR1Q7Z6M3 343 aa6.34□□□□□ -1.39
COL21A1-205ENST00000461489 TTLL6Q8N841 843 aa6.34□□□□□ -1.39
COL21A1-205ENST00000461489 NPLOC4Q8TAT6 608 aa6.34□□□□□ -1.39
COL21A1-205ENST00000461489 BTN2A2Q8WVV5 523 aa6.34□□□□□ -1.39
COL21A1-205ENST00000461489 MRGPRX3Q96LB0 322 aa6.34□□□□□ -1.39
COL21A1-205ENST00000461489 YIPF4Q9BSR8 244 aa6.34□□□□□ -1.39
COL21A1-205ENST00000461489 TGIF2Q9GZN2 237 aa6.34□□□□□ -1.39
COL21A1-205ENST00000461489 ACBD3Q9H3P7 528 aa6.34□□□□□ -1.39
COL21A1-205ENST00000461489 TMPRSS5Q9H3S3 457 aa6.34□□□□□ -1.39
COL21A1-205ENST00000461489 CCSER2Q9H7U1 834 aa6.34□□□□□ -1.39
COL21A1-205ENST00000461489 MYRFQ9Y2G1 1151 aa6.34□□□□□ -1.39
COL21A1-205ENST00000461489 TIMM13Q9Y5L4 95 aaPredicted RBP6.34□□□□□ -1.39
COL21A1-205ENST00000461489 SLC6A11P48066 632 aa6.33□□□□□ -1.4
COL21A1-205ENST00000461489 KIAA2012Q0VF49 1180 aa6.33□□□□□ -1.4
COL21A1-205ENST00000461489 CEP68Q76N32 757 aa6.33□□□□□ -1.4
COL21A1-205ENST00000461489 FAM124AQ86V42 546 aa6.33□□□□□ -1.4
COL21A1-205ENST00000461489 FAM126BQ8IXS8 530 aa6.33□□□□□ -1.4
COL21A1-205ENST00000461489 DIO2Q92813 273 aa6.33□□□□□ -1.4
COL21A1-205ENST00000461489 TRMT2BQ96GJ1 504 aaKnown RBP6.33□□□□□ -1.4
COL21A1-205ENST00000461489 MYO1BO43795 1136 aa6.32□□□□□ -1.4
COL21A1-205ENST00000461489 PLATP00750 562 aa6.32□□□□□ -1.4
COL21A1-205ENST00000461489 SNRPB2P08579 225 aaKnown RBP6.32□□□□□ -1.4
COL21A1-205ENST00000461489 ECI1P42126 302 aa6.32□□□□□ -1.4
COL21A1-205ENST00000461489 STAT5AP42229 794 aa6.32□□□□□ -1.4
COL21A1-205ENST00000461489 ITGA1P56199 1179 aa6.32□□□□□ -1.4
COL21A1-205ENST00000461489 ADAM17P78536 824 aa6.32□□□□□ -1.4
COL21A1-205ENST00000461489 SV2CQ496J9 727 aa6.32□□□□□ -1.4
COL21A1-205ENST00000461489 FAM26FQ5R3K3 315 aa6.32□□□□□ -1.4
COL21A1-205ENST00000461489 E4F1Q66K89 784 aaPredicted RBP6.32□□□□□ -1.4
COL21A1-205ENST00000461489 MCTP2Q6DN12 878 aa6.32□□□□□ -1.4
COL21A1-205ENST00000461489 BORAQ6PGQ7 559 aa6.32□□□□□ -1.4
COL21A1-205ENST00000461489 RIOX2Q8IUF8 465 aa6.32□□□□□ -1.4
COL21A1-205ENST00000461489 LGI4Q8N135 537 aa6.32□□□□□ -1.4
COL21A1-205ENST00000461489 LOXL4Q96JB6 756 aa6.32□□□□□ -1.4
COL21A1-205ENST00000461489 RBM15Q96T37 977 aaKnown RBP eCLIP6.32□□□□□ -1.4
COL21A1-205ENST00000461489 LRP2BPQ9P2M1 347 aa6.32□□□□□ -1.4
COL21A1-205ENST00000461489 MROH6A6NGR9 719 aa6.31□□□□□ -1.4
COL21A1-205ENST00000461489 MEFVO15553 781 aaPredicted RBP6.31□□□□□ -1.4
COL21A1-205ENST00000461489 BCL6P41182 706 aa6.31□□□□□ -1.4
COL21A1-205ENST00000461489 GTF2A2P52657 109 aa6.31□□□□□ -1.4
COL21A1-205ENST00000461489 CYP4F3Q08477 520 aa6.31□□□□□ -1.4
COL21A1-205ENST00000461489 KCNAB2Q13303 367 aa6.31□□□□□ -1.4
COL21A1-205ENST00000461489 TBC1D10BQ4KMP7 808 aaPredicted RBP6.31□□□□□ -1.4
COL21A1-205ENST00000461489 LARP1BQ659C4 914 aaKnown RBP6.31□□□□□ -1.4
COL21A1-205ENST00000461489 C6orf15Q6UXA7 325 aaPredicted RBP6.31□□□□□ -1.4
COL21A1-205ENST00000461489 TMEM169Q96HH4 297 aa6.31□□□□□ -1.4
COL21A1-205ENST00000461489 NGRNQ9NPE2 291 aaKnown RBP6.31□□□□□ -1.4
COL21A1-205ENST00000461489 TMEFF2Q9UIK5 374 aaPredicted RBP6.31□□□□□ -1.4
COL21A1-205ENST00000461489 INVSQ9Y283 1065 aa6.31□□□□□ -1.4
COL21A1-205ENST00000461489 COA3Q9Y2R0 106 aaPredicted RBP6.31□□□□□ -1.4
COL21A1-205ENST00000461489 X6R8D5 127 aa6.31□□□□□ -1.4
COL21A1-205ENST00000461489 ZNF536O15090 1300 aa6.3□□□□□ -1.4
COL21A1-205ENST00000461489 DDX3XO00571 662 aaKnown RBP eCLIP6.3□□□□□ -1.4
COL21A1-205ENST00000461489 SMAD7O15105 426 aaKnown RBP6.3□□□□□ -1.4
COL21A1-205ENST00000461489 TBX1O43435 398 aa6.3□□□□□ -1.4
COL21A1-205ENST00000461489 HOXC12P31275 282 aa6.3□□□□□ -1.4
COL21A1-205ENST00000461489 NKX3-2P78367 333 aa6.3□□□□□ -1.4
COL21A1-205ENST00000461489 NLRP10Q86W26 655 aa6.3□□□□□ -1.4
COL21A1-205ENST00000461489 CCDC103Q8IW40 242 aa6.3□□□□□ -1.4
COL21A1-205ENST00000461489 FAM178BQ8IXR5 827 aa6.3□□□□□ -1.4
COL21A1-205ENST00000461489 TXNDC5Q8NBS9 432 aaKnown RBP6.3□□□□□ -1.4
COL21A1-205ENST00000461489 ACTR10Q9NZ32 417 aa6.3□□□□□ -1.4
COL21A1-205ENST00000461489 MRVI1Q9Y6F6 885 aa6.3□□□□□ -1.4
COL21A1-205ENST00000461489 ITGAVP06756 1048 aa6.29□□□□□ -1.4
COL21A1-205ENST00000461489 KCNJ6P48051 423 aa6.29□□□□□ -1.4
COL21A1-205ENST00000461489 CHRNA2Q15822 529 aa6.29□□□□□ -1.4
COL21A1-205ENST00000461489 PRAMEF18Q5VWM3 479 aa6.29□□□□□ -1.4
COL21A1-205ENST00000461489 ZNF227Q86WZ6 799 aa6.29□□□□□ -1.4
COL21A1-205ENST00000461489 Q8N1Y9 231 aa6.29□□□□□ -1.4
COL21A1-205ENST00000461489 CHAMP1Q96JM3 812 aa6.29□□□□□ -1.4
COL21A1-205ENST00000461489 SAMD11Q96NU1 681 aa6.29□□□□□ -1.4
COL21A1-205ENST00000461489 B2RBV5 119 aa6.28□□□□□ -1.4
COL21A1-205ENST00000461489 SSBP05455 408 aaKnown RBP eCLIP6.28□□□□□ -1.4
COL21A1-205ENST00000461489 ATF4P18848 351 aaPredicted RBP6.28□□□□□ -1.4
COL21A1-205ENST00000461489 CR1LQ2VPA4 569 aa6.28□□□□□ -1.4
COL21A1-205ENST00000461489 TNNI3KQ59H18 835 aa6.28□□□□□ -1.4
COL21A1-205ENST00000461489 PRR31Q5SQ13 230 aa6.28□□□□□ -1.4
COL21A1-205ENST00000461489 CPZQ66K79 652 aa6.28□□□□□ -1.4
COL21A1-205ENST00000461489 PPIL6Q8IXY8 311 aa6.28□□□□□ -1.4
COL21A1-205ENST00000461489 TTC9BQ8N6N2 239 aa6.28□□□□□ -1.4
COL21A1-205ENST00000461489 CHST13Q8NET6 341 aa6.28□□□□□ -1.4
COL21A1-205ENST00000461489 LCORQ96JN0 433 aaPredicted RBP6.28□□□□□ -1.4
COL21A1-205ENST00000461489 CCDC140Q96MF4 163 aa6.28□□□□□ -1.4
COL21A1-205ENST00000461489 C8orf49Q96NF6 230 aa6.28□□□□□ -1.4
COL21A1-205ENST00000461489 CAPN10Q9HC96 672 aa6.28□□□□□ -1.4
COL21A1-205ENST00000461489 KIAA1522Q9P206 1035 aaPredicted RBP6.28□□□□□ -1.4
COL21A1-205ENST00000461489 FBXL7Q9UJT9 491 aa6.28□□□□□ -1.4
COL21A1-205ENST00000461489 ZNF652Q9Y2D9 606 aa6.28□□□□□ -1.4
COL21A1-205ENST00000461489 ARNTLO00327 626 aa6.27□□□□□ -1.41
COL21A1-205ENST00000461489 HGSO14964 777 aaPredicted RBP6.27□□□□□ -1.41
COL21A1-205ENST00000461489 SUSD5O60279 629 aa6.27□□□□□ -1.41
COL21A1-205ENST00000461489 DDAH1O94760 285 aa6.27□□□□□ -1.41
COL21A1-205ENST00000461489 CPP00450 1065 aa6.27□□□□□ -1.41
COL21A1-205ENST00000461489 CYP1A1P04798 512 aaPredicted RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms