RNA–Protein interactions for RNA: ENST00000461187.5

SMPD4-216, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 659 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-216ENST00000461187 GSPT1P15170 499 aaKnown RBP17.13■□□□□ 0.33
SMPD4-216ENST00000461187 EIF2AK2P19525 551 aaKnown RBP17.13■□□□□ 0.33
SMPD4-216ENST00000461187 TJAP1Q5JTD0 557 aa17.13■□□□□ 0.33
SMPD4-216ENST00000461187 ARHGEF16Q5VV41 709 aa17.13■□□□□ 0.33
SMPD4-216ENST00000461187 RETREG2Q8NC44 543 aa17.13■□□□□ 0.33
SMPD4-216ENST00000461187 KAT2BQ92831 832 aa17.13■□□□□ 0.33
SMPD4-216ENST00000461187 MTMR8Q96EF0 704 aa17.13■□□□□ 0.33
SMPD4-216ENST00000461187 CTAGE1Q96RT6 745 aa17.13■□□□□ 0.33
SMPD4-216ENST00000461187 PXMP2Q9NR77 195 aa17.13■□□□□ 0.33
SMPD4-216ENST00000461187 COL4A4P53420 1690 aaPredicted RBP17.13■□□□□ 0.33
SMPD4-216ENST00000461187 SIP14410 1827 aa17.12■□□□□ 0.33
SMPD4-216ENST00000461187 KLRF2D3W0D1 207 aa17.12■□□□□ 0.33
SMPD4-216ENST00000461187 PPP1R11O60927 126 aaPredicted RBP17.12■□□□□ 0.33
SMPD4-216ENST00000461187 CFBP00751 764 aa17.12■□□□□ 0.33
SMPD4-216ENST00000461187 NR3C2P08235 984 aa17.12■□□□□ 0.33
SMPD4-216ENST00000461187 ACTN1P12814 892 aa17.12■□□□□ 0.33
SMPD4-216ENST00000461187 IGFBP4P22692 258 aa17.12■□□□□ 0.33
SMPD4-216ENST00000461187 HSD17B4P51659 736 aa17.12■□□□□ 0.33
SMPD4-216ENST00000461187 CHMP4BP1P59074 171 aa17.12■□□□□ 0.33
SMPD4-216ENST00000461187 GHRHRQ02643 423 aa17.12■□□□□ 0.33
SMPD4-216ENST00000461187 BFSP2Q13515 415 aa17.12■□□□□ 0.33
SMPD4-216ENST00000461187 PTGISQ16647 500 aa17.12■□□□□ 0.33
SMPD4-216ENST00000461187 TTC22Q5TAA0 569 aa17.12■□□□□ 0.33
SMPD4-216ENST00000461187 PPP2R2DQ66LE6 453 aa17.12■□□□□ 0.33
SMPD4-216ENST00000461187 GDF6Q6KF10 455 aaPredicted RBP17.12■□□□□ 0.33
SMPD4-216ENST00000461187 CHST3Q7LGC8 479 aa17.12■□□□□ 0.33
SMPD4-216ENST00000461187 SESTD1Q86VW0 696 aa17.12■□□□□ 0.33
SMPD4-216ENST00000461187 AMNQ9BXJ7 453 aa17.12■□□□□ 0.33
SMPD4-216ENST00000461187 MAD2L2Q9UI95 211 aa17.12■□□□□ 0.33
SMPD4-216ENST00000461187 DDX41Q9UJV9 622 aaKnown RBP17.12■□□□□ 0.33
SMPD4-216ENST00000461187 PALM3A6NDB9 673 aaPredicted RBP17.11■□□□□ 0.33
SMPD4-216ENST00000461187 EIF3JO75822 258 aaKnown RBP17.11■□□□□ 0.33
SMPD4-216ENST00000461187 CASTP20810 708 aaKnown RBP17.11■□□□□ 0.33
SMPD4-216ENST00000461187 CCDC85BQ15834 202 aaPredicted RBP17.11■□□□□ 0.33
SMPD4-216ENST00000461187 EMID1Q96A84 441 aaPredicted RBP17.11■□□□□ 0.33
SMPD4-216ENST00000461187 NOD1Q9Y239 953 aa17.11■□□□□ 0.33
SMPD4-216ENST00000461187 ZBTB5O15062 677 aa17.1■□□□□ 0.33
SMPD4-216ENST00000461187 DGKDQ16760 1214 aa17.1■□□□□ 0.33
SMPD4-216ENST00000461187 SLC35G1Q2M3R5 365 aa17.1■□□□□ 0.33
SMPD4-216ENST00000461187 TMEM67Q5HYA8 995 aa17.1■□□□□ 0.33
SMPD4-216ENST00000461187 CAGE1Q8TC20 777 aa17.1■□□□□ 0.33
SMPD4-216ENST00000461187 ATXN2LQ8WWM7 1075 aaKnown RBP17.1■□□□□ 0.33
SMPD4-216ENST00000461187 SLC9A7Q96T83 725 aa17.1■□□□□ 0.33
SMPD4-216ENST00000461187 PDCD2LQ9BRP1 358 aa17.1■□□□□ 0.33
SMPD4-216ENST00000461187 FTOQ9C0B1 505 aaKnown RBP eCLIP17.1■□□□□ 0.33
SMPD4-216ENST00000461187 MAP3K20Q9NYL2 800 aaKnown RBP17.1■□□□□ 0.33
SMPD4-216ENST00000461187 XIRP2A4UGR9 3374 aa17.09■□□□□ 0.33
SMPD4-216ENST00000461187 RGS20O76081 388 aa17.09■□□□□ 0.33
SMPD4-216ENST00000461187 CA3P07451 260 aa17.09■□□□□ 0.33
SMPD4-216ENST00000461187 CYP21A2P08686 494 aa17.09■□□□□ 0.33
SMPD4-216ENST00000461187 PTH1RQ03431 593 aa17.09■□□□□ 0.33
SMPD4-216ENST00000461187 GPNMBQ14956 572 aa17.09■□□□□ 0.33
SMPD4-216ENST00000461187 STOX1Q6ZVD7 989 aa17.09■□□□□ 0.33
SMPD4-216ENST00000461187 CCDC155Q8N6L0 562 aa17.09■□□□□ 0.33
SMPD4-216ENST00000461187 PPTC7Q8NI37 304 aa17.09■□□□□ 0.33
SMPD4-216ENST00000461187 PHOSPHO2Q8TCD6 241 aa17.09■□□□□ 0.33
SMPD4-216ENST00000461187 AFAP1L1Q8TED9 768 aa17.09■□□□□ 0.33
SMPD4-216ENST00000461187 DHX38Q92620 1227 aaKnown RBP17.09■□□□□ 0.33
SMPD4-216ENST00000461187 THEGQ9P2T0 379 aa17.09■□□□□ 0.33
SMPD4-216ENST00000461187 GTF2IRD1Q9UHL9 959 aa17.09■□□□□ 0.33
SMPD4-216ENST00000461187 PCDHA1Q9Y5I3 950 aa17.09■□□□□ 0.33
SMPD4-216ENST00000461187 MRVI1Q9Y6F6 885 aa17.09■□□□□ 0.33
SMPD4-216ENST00000461187 NLRC5Q86WI3 1866 aa17.09■□□□□ 0.33
SMPD4-216ENST00000461187 LOXHD1Q8IVV2 1947 aa17.09■□□□□ 0.33
SMPD4-216ENST00000461187 BDP1A6H8Y1 2624 aa17.08■□□□□ 0.33
SMPD4-216ENST00000461187 CHMLP26374 656 aa17.08■□□□□ 0.32
SMPD4-216ENST00000461187 PSEN2P49810 448 aa17.08■□□□□ 0.32
SMPD4-216ENST00000461187 RBL2Q08999 1139 aa17.08■□□□□ 0.32
SMPD4-216ENST00000461187 TRDNQ13061 729 aa17.08■□□□□ 0.32
SMPD4-216ENST00000461187 LAMC2Q13753 1193 aa17.08■□□□□ 0.32
SMPD4-216ENST00000461187 GRM4Q14833 912 aa17.08■□□□□ 0.32
SMPD4-216ENST00000461187 DHX37Q8IY37 1157 aaKnown RBP17.08■□□□□ 0.32
SMPD4-216ENST00000461187 SAMD3Q8N6K7 520 aa17.08■□□□□ 0.32
SMPD4-216ENST00000461187 RIOX1Q9H6W3 641 aa17.08■□□□□ 0.32
SMPD4-216ENST00000461187 SENP2Q9HC62 589 aa17.08■□□□□ 0.32
SMPD4-216ENST00000461187 HDAC6Q9UBN7 1215 aa17.08■□□□□ 0.32
SMPD4-216ENST00000461187 TAF6LQ9Y6J9 622 aa17.08■□□□□ 0.32
SMPD4-216ENST00000461187 HAS3O00219 553 aa17.07■□□□□ 0.32
SMPD4-216ENST00000461187 BAIAP3O94812 1187 aa17.07■□□□□ 0.32
SMPD4-216ENST00000461187 F2P00734 622 aa17.07■□□□□ 0.32
SMPD4-216ENST00000461187 ZNF286BP0CG31 522 aa17.07■□□□□ 0.32
SMPD4-216ENST00000461187 MYCLP12524 364 aaPredicted RBP17.07■□□□□ 0.32
SMPD4-216ENST00000461187 HOXD8P13378 290 aaPredicted RBP17.07■□□□□ 0.32
SMPD4-216ENST00000461187 SELPP16109 830 aa17.07■□□□□ 0.32
SMPD4-216ENST00000461187 HOXA13P31271 388 aaPredicted RBP17.07■□□□□ 0.32
SMPD4-216ENST00000461187 PGM5Q15124 567 aa17.07■□□□□ 0.32
SMPD4-216ENST00000461187 VSIG10LQ86VR7 867 aa17.07■□□□□ 0.32
SMPD4-216ENST00000461187 HOMER1Q86YM7 354 aa17.07■□□□□ 0.32
SMPD4-216ENST00000461187 HERC6Q8IVU3 1022 aa17.07■□□□□ 0.32
SMPD4-216ENST00000461187 IL31RAQ8NI17 732 aa17.07■□□□□ 0.32
SMPD4-216ENST00000461187 RUFY2Q8WXA3 655 aa17.07■□□□□ 0.32
SMPD4-216ENST00000461187 ASB2Q96Q27 587 aa17.07■□□□□ 0.32
SMPD4-216ENST00000461187 PIGSQ96S52 555 aa17.07■□□□□ 0.32
SMPD4-216ENST00000461187 ALG1Q9BT22 464 aa17.07■□□□□ 0.32
SMPD4-216ENST00000461187 KATNAL1Q9BW62 490 aa17.07■□□□□ 0.32
SMPD4-216ENST00000461187 SUPT16HQ9Y5B9 1047 aaKnown RBP17.07■□□□□ 0.32
SMPD4-216ENST00000461187 U3KPZ7 1027 aaPredicted RBP17.07■□□□□ 0.32
SMPD4-216ENST00000461187 RFXAPO00287 272 aa17.06■□□□□ 0.32
SMPD4-216ENST00000461187 IFIT3O14879 490 aaKnown RBP17.06■□□□□ 0.32
SMPD4-216ENST00000461187 CYTH3O43739 400 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms