RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 PARD3Q8TEW0 1356 aa6.23□□□□□ -1.41
ATPAF1-203ENST00000460928 NWD2Q9ULI1 1742 aa6.23□□□□□ -1.41
ATPAF1-203ENST00000460928 TLDC2A0PJX2 215 aa6.23□□□□□ -1.41
ATPAF1-203ENST00000460928 RBAK-RBAKDNI3L0D1 243 aa6.23□□□□□ -1.41
ATPAF1-203ENST00000460928 CILPO75339 1184 aa6.23□□□□□ -1.41
ATPAF1-203ENST00000460928 PF4P02776 101 aa6.23□□□□□ -1.41
ATPAF1-203ENST00000460928 HMOX1P09601 288 aa6.23□□□□□ -1.41
ATPAF1-203ENST00000460928 NASPP49321 788 aaPredicted RBP6.23□□□□□ -1.41
ATPAF1-203ENST00000460928 YARSP54577 528 aaKnown RBP6.23□□□□□ -1.41
ATPAF1-203ENST00000460928 ERVFC1P60507 584 aa6.23□□□□□ -1.41
ATPAF1-203ENST00000460928 TSPYL5Q86VY4 417 aaPredicted RBP6.23□□□□□ -1.41
ATPAF1-203ENST00000460928 SLFN12Q8IYM2 578 aa6.23□□□□□ -1.41
ATPAF1-203ENST00000460928 PDZD8Q8NEN9 1154 aa6.23□□□□□ -1.41
ATPAF1-203ENST00000460928 RNF141Q8WVD5 230 aa6.23□□□□□ -1.41
ATPAF1-203ENST00000460928 NT5C1AQ9BXI3 368 aa6.23□□□□□ -1.41
ATPAF1-203ENST00000460928 OSBPL2Q9H1P3 480 aa6.23□□□□□ -1.41
ATPAF1-203ENST00000460928 ADAMTS10Q9H324 1103 aa6.23□□□□□ -1.41
ATPAF1-203ENST00000460928 PIF1Q9H611 641 aa6.23□□□□□ -1.41
ATPAF1-203ENST00000460928 SP110Q9HB58 689 aa6.23□□□□□ -1.41
ATPAF1-203ENST00000460928 CD320Q9NPF0 282 aa6.23□□□□□ -1.41
ATPAF1-203ENST00000460928 DCP1AQ9NPI6 582 aaPredicted RBP6.23□□□□□ -1.41
ATPAF1-203ENST00000460928 KCNQ5Q9NR82 932 aa6.23□□□□□ -1.41
ATPAF1-203ENST00000460928 GINM1Q9NU53 330 aa6.23□□□□□ -1.41
ATPAF1-203ENST00000460928 KCNH3Q9ULD8 1083 aa6.23□□□□□ -1.41
ATPAF1-203ENST00000460928 EFR3BQ9Y2G0 817 aa6.23□□□□□ -1.41
ATPAF1-203ENST00000460928 WDR17Q8IZU2 1322 aa6.23□□□□□ -1.41
ATPAF1-203ENST00000460928 TNS1Q9HBL0 1735 aaKnown RBP6.22□□□□□ -1.41
ATPAF1-203ENST00000460928 FAM221AA4D161 298 aa6.22□□□□□ -1.41
ATPAF1-203ENST00000460928 WASH4PA8MWX3 477 aa6.22□□□□□ -1.41
ATPAF1-203ENST00000460928 GREM1O60565 184 aa6.22□□□□□ -1.41
ATPAF1-203ENST00000460928 PLCG1P19174 1290 aa6.22□□□□□ -1.41
ATPAF1-203ENST00000460928 GLDCP23378 1020 aa6.22□□□□□ -1.41
ATPAF1-203ENST00000460928 IL13P35225 146 aa6.22□□□□□ -1.41
ATPAF1-203ENST00000460928 HK2P52789 917 aa6.22□□□□□ -1.41
ATPAF1-203ENST00000460928 LMNB2Q03252 620 aa6.22□□□□□ -1.41
ATPAF1-203ENST00000460928 FAM160A1Q05DH4 1040 aa6.22□□□□□ -1.41
ATPAF1-203ENST00000460928 CAMK2GQ13555 558 aaPredicted RBP6.22□□□□□ -1.41
ATPAF1-203ENST00000460928 PTF1AQ7RTS3 328 aa6.22□□□□□ -1.41
ATPAF1-203ENST00000460928 AMIGO3Q86WK7 504 aa6.22□□□□□ -1.41
ATPAF1-203ENST00000460928 CKAP2LQ8IYA6 745 aa6.22□□□□□ -1.41
ATPAF1-203ENST00000460928 LILRA2Q8N149 483 aa6.22□□□□□ -1.41
ATPAF1-203ENST00000460928 JARID2Q92833 1246 aaPredicted RBP6.22□□□□□ -1.41
ATPAF1-203ENST00000460928 RHOVQ96L33 236 aa6.22□□□□□ -1.41
ATPAF1-203ENST00000460928 KRTAP4-11Q9BYQ6 195 aa6.22□□□□□ -1.41
ATPAF1-203ENST00000460928 PRKRIP1Q9H875 184 aaPredicted RBP6.22□□□□□ -1.41
ATPAF1-203ENST00000460928 DUSP13Q9UII6 198 aa6.22□□□□□ -1.41
ATPAF1-203ENST00000460928 TMA7Q9Y2S6 64 aaKnown RBP6.22□□□□□ -1.41
ATPAF1-203ENST00000460928 SUPT16HQ9Y5B9 1047 aaKnown RBP6.22□□□□□ -1.41
ATPAF1-203ENST00000460928 CORINQ9Y5Q5 1042 aa6.22□□□□□ -1.41
ATPAF1-203ENST00000460928 KAT6BQ8WYB5 2073 aa6.22□□□□□ -1.41
ATPAF1-203ENST00000460928 COL3A1P02461 1466 aaPredicted RBP6.22□□□□□ -1.41
ATPAF1-203ENST00000460928 NSD2O96028 1365 aa6.21□□□□□ -1.41
ATPAF1-203ENST00000460928 INSRP06213 1382 aa6.21□□□□□ -1.41
ATPAF1-203ENST00000460928 FLT4P35916 1363 aa6.21□□□□□ -1.41
ATPAF1-203ENST00000460928 NPC1L1Q9UHC9 1359 aa6.21□□□□□ -1.41
ATPAF1-203ENST00000460928 MEGF6O75095 1541 aa6.21□□□□□ -1.42
ATPAF1-203ENST00000460928 FAM208AQ9UK61 1670 aaKnown RBP6.21□□□□□ -1.42
ATPAF1-203ENST00000460928 BPNT1O95861 308 aa6.21□□□□□ -1.42
ATPAF1-203ENST00000460928 ZGLP1P0C6A0 271 aa6.21□□□□□ -1.42
ATPAF1-203ENST00000460928 TMEM253P0C7T8 217 aa6.21□□□□□ -1.42
ATPAF1-203ENST00000460928 ZSCAN22P10073 491 aaPredicted RBP6.21□□□□□ -1.42
ATPAF1-203ENST00000460928 HSPA6P17066 643 aa6.21□□□□□ -1.42
ATPAF1-203ENST00000460928 GARTP22102 1010 aa6.21□□□□□ -1.42
ATPAF1-203ENST00000460928 NR0B2Q15466 257 aa6.21□□□□□ -1.42
ATPAF1-203ENST00000460928 SNAP47Q5SQN1 464 aa6.21□□□□□ -1.42
ATPAF1-203ENST00000460928 KRT27Q7Z3Y8 459 aa6.21□□□□□ -1.42
ATPAF1-203ENST00000460928 TCP11L2Q8N4U5 519 aa6.21□□□□□ -1.42
ATPAF1-203ENST00000460928 GOLM1Q8NBJ4 401 aa6.21□□□□□ -1.42
ATPAF1-203ENST00000460928 FAM13CQ8NE31 585 aa6.21□□□□□ -1.42
ATPAF1-203ENST00000460928 GATAD2BQ8WXI9 593 aa6.21□□□□□ -1.42
ATPAF1-203ENST00000460928 CRB1P82279 1406 aa6.21□□□□□ -1.42
ATPAF1-203ENST00000460928 SMG6Q86US8 1419 aaKnown RBP6.21□□□□□ -1.42
ATPAF1-203ENST00000460928 SHANK3Q9BYB0 1731 aa6.2□□□□□ -1.42
ATPAF1-203ENST00000460928 DISP2A7MBM2 1401 aa6.2□□□□□ -1.42
ATPAF1-203ENST00000460928 KRTAP9-7A8MTY7 169 aa6.2□□□□□ -1.42
ATPAF1-203ENST00000460928 UPK3BL1B0FP48 263 aa6.2□□□□□ -1.42
ATPAF1-203ENST00000460928 UPK3BL2E5RIL1 263 aa6.2□□□□□ -1.42
ATPAF1-203ENST00000460928 U2SURPO15042 1029 aaKnown RBP6.2□□□□□ -1.42
ATPAF1-203ENST00000460928 KCNQ2O43526 872 aa6.2□□□□□ -1.42
ATPAF1-203ENST00000460928 ETFBP38117 255 aa6.2□□□□□ -1.42
ATPAF1-203ENST00000460928 SOX9P48436 509 aa6.2□□□□□ -1.42
ATPAF1-203ENST00000460928 EGR3Q06889 387 aa6.2□□□□□ -1.42
ATPAF1-203ENST00000460928 COL9A2Q14055 689 aaPredicted RBP6.2□□□□□ -1.42
ATPAF1-203ENST00000460928 KCNA10Q16322 511 aa6.2□□□□□ -1.42
ATPAF1-203ENST00000460928 BNC2Q6ZN30 1099 aaPredicted RBP6.2□□□□□ -1.42
ATPAF1-203ENST00000460928 IRF2BP1Q8IU81 584 aa6.2□□□□□ -1.42
ATPAF1-203ENST00000460928 MARCH10Q8NA82 808 aaPredicted RBP6.2□□□□□ -1.42
ATPAF1-203ENST00000460928 ZNF408Q9H9D4 720 aa6.2□□□□□ -1.42
ATPAF1-203ENST00000460928 UBP1Q9NZI7 540 aa6.2□□□□□ -1.42
ATPAF1-203ENST00000460928 RAPGEFL1Q9UHV5 662 aa6.2□□□□□ -1.42
ATPAF1-203ENST00000460928 STRIP2Q9ULQ0 834 aa6.2□□□□□ -1.42
ATPAF1-203ENST00000460928 MRVI1Q9Y6F6 885 aa6.2□□□□□ -1.42
ATPAF1-203ENST00000460928 FANCIQ9NVI1 1328 aa6.2□□□□□ -1.42
ATPAF1-203ENST00000460928 RTL1A6NKG5 1358 aa6.19□□□□□ -1.42
ATPAF1-203ENST00000460928 GOLGB1Q14789 3259 aaKnown RBP6.19□□□□□ -1.42
ATPAF1-203ENST00000460928 NUP188Q5SRE5 1749 aa6.19□□□□□ -1.42
ATPAF1-203ENST00000460928 FITM1A5D6W6 292 aa6.19□□□□□ -1.42
ATPAF1-203ENST00000460928 NPIPB6E9PJ23 425 aa6.19□□□□□ -1.42
ATPAF1-203ENST00000460928 DIAPH1O60610 1272 aaKnown RBP6.19□□□□□ -1.42
ATPAF1-203ENST00000460928 BMS1Q14692 1282 aaKnown RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms