RNA–Protein interactions for RNA: ENST00000460925.1

SF3A3-202, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-202ENST00000460925 FEZ1Q99689 392 aa6.18□□□□□ -1.42
SF3A3-202ENST00000460925 PLVAPQ9BX97 442 aa6.18□□□□□ -1.42
SF3A3-202ENST00000460925 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.18□□□□□ -1.42
SF3A3-202ENST00000460925 RRAGCQ9HB90 399 aa6.18□□□□□ -1.42
SF3A3-202ENST00000460925 SUCOQ9UBS9 1254 aaKnown RBP6.18□□□□□ -1.42
SF3A3-202ENST00000460925 LEMD3Q9Y2U8 911 aa6.18□□□□□ -1.42
SF3A3-202ENST00000460925 BCORQ6W2J9 1755 aa6.18□□□□□ -1.42
SF3A3-202ENST00000460925 IQCA1LA6NCM1 817 aa6.17□□□□□ -1.42
SF3A3-202ENST00000460925 PLIN1O60240 522 aa6.17□□□□□ -1.42
SF3A3-202ENST00000460925 VAMP4O75379 141 aa6.17□□□□□ -1.42
SF3A3-202ENST00000460925 A1BGP04217 495 aa6.17□□□□□ -1.42
SF3A3-202ENST00000460925 MYL6BP14649 208 aa6.17□□□□□ -1.42
SF3A3-202ENST00000460925 POLR2BP30876 1174 aaKnown RBP6.17□□□□□ -1.42
SF3A3-202ENST00000460925 TRIM28Q13263 835 aaKnown RBP6.17□□□□□ -1.42
SF3A3-202ENST00000460925 PTPROQ16827 1216 aa6.17□□□□□ -1.42
SF3A3-202ENST00000460925 GNPTABQ3T906 1256 aa6.17□□□□□ -1.42
SF3A3-202ENST00000460925 TMEM67Q5HYA8 995 aa6.17□□□□□ -1.42
SF3A3-202ENST00000460925 CDC37L1Q7L3B6 337 aa6.17□□□□□ -1.42
SF3A3-202ENST00000460925 G2E3Q7L622 706 aa6.17□□□□□ -1.42
SF3A3-202ENST00000460925 PHACTR4Q8IZ21 702 aa6.17□□□□□ -1.42
SF3A3-202ENST00000460925 LRRC47Q8N1G4 583 aaKnown RBP6.17□□□□□ -1.42
SF3A3-202ENST00000460925 C2CD4AQ8NCU7 369 aaPredicted RBP6.17□□□□□ -1.42
SF3A3-202ENST00000460925 ZSWIM2Q8NEG5 633 aa6.17□□□□□ -1.42
SF3A3-202ENST00000460925 SSH1Q8WYL5 1049 aa6.17□□□□□ -1.42
SF3A3-202ENST00000460925 SMARCC1Q92922 1105 aaPredicted RBP6.17□□□□□ -1.42
SF3A3-202ENST00000460925 ISL2Q96A47 359 aa6.17□□□□□ -1.42
SF3A3-202ENST00000460925 GPATCH3Q96I76 525 aa6.17□□□□□ -1.42
SF3A3-202ENST00000460925 SLC6A18Q96N87 628 aa6.17□□□□□ -1.42
SF3A3-202ENST00000460925 SPATA9Q9BWV2 254 aa6.17□□□□□ -1.42
SF3A3-202ENST00000460925 SLKQ9H2G2 1235 aaPredicted RBP6.17□□□□□ -1.42
SF3A3-202ENST00000460925 CHPF2Q9P2E5 772 aa6.17□□□□□ -1.42
SF3A3-202ENST00000460925 PFDN2Q9UHV9 154 aa6.17□□□□□ -1.42
SF3A3-202ENST00000460925 CCNL1Q9UK58 526 aaPredicted RBP6.17□□□□□ -1.42
SF3A3-202ENST00000460925 PCDHB10Q9UN67 800 aa6.17□□□□□ -1.42
SF3A3-202ENST00000460925 AP4E1Q9UPM8 1137 aa6.17□□□□□ -1.42
SF3A3-202ENST00000460925 ZBTB1Q9Y2K1 713 aa6.17□□□□□ -1.42
SF3A3-202ENST00000460925 PTCH2Q9Y6C5 1203 aa6.17□□□□□ -1.42
SF3A3-202ENST00000460925 SCN7AQ01118 1682 aa6.17□□□□□ -1.42
SF3A3-202ENST00000460925 ANKRD36CQ5JPF3 1778 aa6.16□□□□□ -1.42
SF3A3-202ENST00000460925 N4BP2Q86UW6 1770 aaPredicted RBP6.16□□□□□ -1.42
SF3A3-202ENST00000460925 CASZ1Q86V15 1759 aa6.16□□□□□ -1.42
SF3A3-202ENST00000460925 NUP98P52948 1817 aa6.16□□□□□ -1.42
SF3A3-202ENST00000460925 CCDC163A0A0D9SF12 145 aa6.16□□□□□ -1.42
SF3A3-202ENST00000460925 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.16□□□□□ -1.42
SF3A3-202ENST00000460925 F8W735 103 aaPredicted RBP6.16□□□□□ -1.42
SF3A3-202ENST00000460925 ADCY3O60266 1144 aa6.16□□□□□ -1.42
SF3A3-202ENST00000460925 WFS1O76024 890 aa6.16□□□□□ -1.42
SF3A3-202ENST00000460925 LRIG2O94898 1065 aa6.16□□□□□ -1.42
SF3A3-202ENST00000460925 NAT2P11245 290 aa6.16□□□□□ -1.42
SF3A3-202ENST00000460925 CRKLP46109 303 aaKnown RBP6.16□□□□□ -1.42
SF3A3-202ENST00000460925 RARSP54136 660 aaKnown RBP6.16□□□□□ -1.42
SF3A3-202ENST00000460925 SNRPNP63162 240 aaKnown RBP6.16□□□□□ -1.42
SF3A3-202ENST00000460925 TCEA2Q15560 299 aa6.16□□□□□ -1.42
SF3A3-202ENST00000460925 ZNF827Q17R98 1081 aa6.16□□□□□ -1.42
SF3A3-202ENST00000460925 Q6ZS46 218 aa6.16□□□□□ -1.42
SF3A3-202ENST00000460925 UBE3DQ7Z6J8 389 aa6.16□□□□□ -1.42
SF3A3-202ENST00000460925 PPFIBP1Q86W92 1011 aa6.16□□□□□ -1.42
SF3A3-202ENST00000460925 MFSD2AQ8NA29 543 aa6.16□□□□□ -1.42
SF3A3-202ENST00000460925 ZBTB38Q8NAP3 1195 aaPredicted RBP6.16□□□□□ -1.42
SF3A3-202ENST00000460925 KIF2CQ99661 725 aa6.16□□□□□ -1.42
SF3A3-202ENST00000460925 SMC4Q9NTJ3 1288 aa6.16□□□□□ -1.42
SF3A3-202ENST00000460925 RCAN3Q9UKA8 241 aa6.16□□□□□ -1.42
SF3A3-202ENST00000460925 MKL2Q9ULH7 1088 aa6.16□□□□□ -1.42
SF3A3-202ENST00000460925 ANKRD34BA5PLL1 514 aa6.15□□□□□ -1.42
SF3A3-202ENST00000460925 DNAJC6O75061 913 aa6.15□□□□□ -1.42
SF3A3-202ENST00000460925 SNRPA1P09661 255 aaKnown RBP6.15□□□□□ -1.42
SF3A3-202ENST00000460925 CYP19A1P11511 503 aaPredicted RBP6.15□□□□□ -1.42
SF3A3-202ENST00000460925 HCLS1P14317 486 aaPredicted RBP6.15□□□□□ -1.42
SF3A3-202ENST00000460925 DRD2P14416 443 aa6.15□□□□□ -1.42
SF3A3-202ENST00000460925 ASPAP45381 313 aa6.15□□□□□ -1.42
SF3A3-202ENST00000460925 AIMP1Q12904 312 aaKnown RBP6.15□□□□□ -1.42
SF3A3-202ENST00000460925 TXNRD1Q16881 649 aa6.15□□□□□ -1.42
SF3A3-202ENST00000460925 ANKRD39Q53RE8 183 aa6.15□□□□□ -1.42
SF3A3-202ENST00000460925 PRAMEF13Q5VWM6 474 aa6.15□□□□□ -1.42
SF3A3-202ENST00000460925 FDX2Q6P4F2 183 aa6.15□□□□□ -1.42
SF3A3-202ENST00000460925 SMYD4Q8IYR2 804 aaPredicted RBP6.15□□□□□ -1.42
SF3A3-202ENST00000460925 SVOPQ8N4V2 548 aa6.15□□□□□ -1.42
SF3A3-202ENST00000460925 C12orf50Q8NA57 414 aaPredicted RBP6.15□□□□□ -1.42
SF3A3-202ENST00000460925 PPP1R13LQ8WUF5 828 aa6.15□□□□□ -1.42
SF3A3-202ENST00000460925 FRAT1Q92837 279 aaPredicted RBP6.15□□□□□ -1.42
SF3A3-202ENST00000460925 FOXQ1Q9C009 403 aa6.15□□□□□ -1.42
SF3A3-202ENST00000460925 ACSS3Q9H6R3 686 aa6.15□□□□□ -1.42
SF3A3-202ENST00000460925 PIDD1Q9HB75 910 aa6.15□□□□□ -1.42
SF3A3-202ENST00000460925 SPC25Q9HBM1 224 aa6.15□□□□□ -1.42
SF3A3-202ENST00000460925 FAM105AQ9NUU6 356 aa6.15□□□□□ -1.42
SF3A3-202ENST00000460925 BABAM1Q9NWV8 329 aa6.15□□□□□ -1.42
SF3A3-202ENST00000460925 NOP53Q9NZM5 478 aaKnown RBP6.15□□□□□ -1.42
SF3A3-202ENST00000460925 SUSD2Q9UGT4 822 aa6.15□□□□□ -1.42
SF3A3-202ENST00000460925 PCOLCE2Q9UKZ9 415 aa6.15□□□□□ -1.42
SF3A3-202ENST00000460925 ACTL7BQ9Y614 415 aa6.15□□□□□ -1.42
SF3A3-202ENST00000460925 PPP1R12AO14974 1030 aaPredicted RBP6.14□□□□□ -1.43
SF3A3-202ENST00000460925 CLEC3AO75596 197 aa6.14□□□□□ -1.43
SF3A3-202ENST00000460925 FAM153BP0C7A2 387 aa6.14□□□□□ -1.43
SF3A3-202ENST00000460925 GBP1P32455 592 aa6.14□□□□□ -1.43
SF3A3-202ENST00000460925 GYS2P54840 703 aa6.14□□□□□ -1.43
SF3A3-202ENST00000460925 PRRT3Q5FWE3 981 aa6.14□□□□□ -1.43
SF3A3-202ENST00000460925 LCE2AQ5TA79 106 aaPredicted RBP6.14□□□□□ -1.43
SF3A3-202ENST00000460925 C20orf194Q5TEA3 1177 aa6.14□□□□□ -1.43
SF3A3-202ENST00000460925 INTS5Q6P9B9 1019 aaKnown RBP6.14□□□□□ -1.43
SF3A3-202ENST00000460925 TTLL7Q6ZT98 887 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms