RNA–Protein interactions for RNA: ENST00000460909.1

RPUSD3-210, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-210ENST00000460909 LIMCH1Q9UPQ0 1083 aa23.67■■□□□ 1.38
RPUSD3-210ENST00000460909 DTNBO60941 627 aa23.66■■□□□ 1.38
RPUSD3-210ENST00000460909 CDKL5O76039 1030 aa23.66■■□□□ 1.38
RPUSD3-210ENST00000460909 CCND2P30279 289 aa23.66■■□□□ 1.38
RPUSD3-210ENST00000460909 SEPT14Q6ZU15 432 aa23.66■■□□□ 1.38
RPUSD3-210ENST00000460909 RNF180Q86T96 592 aa23.66■■□□□ 1.38
RPUSD3-210ENST00000460909 GLT8D2Q9H1C3 349 aa23.66■■□□□ 1.38
RPUSD3-210ENST00000460909 C11orf49Q9H6J7 331 aa23.66■■□□□ 1.38
RPUSD3-210ENST00000460909 SH3GLB2Q9NR46 395 aa23.66■■□□□ 1.38
RPUSD3-210ENST00000460909 PCDHA6Q9UN73 950 aa23.66■■□□□ 1.38
RPUSD3-210ENST00000460909 Q9Y3F1 56 aa23.66■■□□□ 1.38
RPUSD3-210ENST00000460909 PCDHA8Q9Y5H6 950 aa23.66■■□□□ 1.38
RPUSD3-210ENST00000460909 STK36Q9NRP7 1315 aa23.65■■□□□ 1.38
RPUSD3-210ENST00000460909 CST5P28325 142 aaPredicted RBP23.65■■□□□ 1.38
RPUSD3-210ENST00000460909 PCNX4Q63HM2 1172 aa23.65■■□□□ 1.38
RPUSD3-210ENST00000460909 CCDC12Q8WUD4 166 aaPredicted RBP23.65■■□□□ 1.38
RPUSD3-210ENST00000460909 ZFP91Q96JP5 570 aaPredicted RBP23.65■■□□□ 1.38
RPUSD3-210ENST00000460909 AIFM3Q96NN9 605 aa23.65■■□□□ 1.38
RPUSD3-210ENST00000460909 VPS54Q9P1Q0 977 aa23.65■■□□□ 1.38
RPUSD3-210ENST00000460909 ALPK3Q96L96 1907 aa23.65■■□□□ 1.38
RPUSD3-210ENST00000460909 SPDYE3A6NKU9 549 aa23.64■■□□□ 1.37
RPUSD3-210ENST00000460909 KBTBD13C9JR72 458 aa23.64■■□□□ 1.37
RPUSD3-210ENST00000460909 TXNP10599 105 aaKnown RBP23.64■■□□□ 1.37
RPUSD3-210ENST00000460909 TTLL4Q14679 1199 aa23.64■■□□□ 1.37
RPUSD3-210ENST00000460909 TLK2Q86UE8 772 aa23.64■■□□□ 1.37
RPUSD3-210ENST00000460909 NSUN7Q8NE18 718 aaKnown RBP23.64■■□□□ 1.37
RPUSD3-210ENST00000460909 IL27Q8NEV9 243 aa23.64■■□□□ 1.37
RPUSD3-210ENST00000460909 TMEM260Q9NX78 707 aa23.64■■□□□ 1.37
RPUSD3-210ENST00000460909 PHF24Q9UPV7 400 aa23.64■■□□□ 1.37
RPUSD3-210ENST00000460909 PDE4DIPQ5VU43 2346 aa23.64■■□□□ 1.37
RPUSD3-210ENST00000460909 NKRFO15226 690 aaKnown RBP eCLIP23.63■■□□□ 1.37
RPUSD3-210ENST00000460909 DYNC1LI2O43237 492 aaPredicted RBP23.63■■□□□ 1.37
RPUSD3-210ENST00000460909 FOSP01100 380 aaPredicted RBP23.63■■□□□ 1.37
RPUSD3-210ENST00000460909 MYCNP04198 464 aaPredicted RBP23.63■■□□□ 1.37
RPUSD3-210ENST00000460909 C6orf222P0C671 652 aaPredicted RBP23.63■■□□□ 1.37
RPUSD3-210ENST00000460909 FDPSP14324 419 aaKnown RBP23.63■■□□□ 1.37
RPUSD3-210ENST00000460909 XRRA1Q6P2D8 792 aa23.63■■□□□ 1.37
RPUSD3-210ENST00000460909 COPS5Q92905 334 aa23.63■■□□□ 1.37
RPUSD3-210ENST00000460909 INPP4AQ96PE3 977 aaPredicted RBP23.63■■□□□ 1.37
RPUSD3-210ENST00000460909 TSEN34Q9BSV6 310 aaKnown RBP23.63■■□□□ 1.37
RPUSD3-210ENST00000460909 C6orf50Q9HD87 102 aa23.63■■□□□ 1.37
RPUSD3-210ENST00000460909 DDX41Q9UJV9 622 aaKnown RBP23.63■■□□□ 1.37
RPUSD3-210ENST00000460909 STAM2O75886 525 aa23.62■■□□□ 1.37
RPUSD3-210ENST00000460909 AP3B2Q13367 1082 aa23.62■■□□□ 1.37
RPUSD3-210ENST00000460909 KCNA10Q16322 511 aa23.62■■□□□ 1.37
RPUSD3-210ENST00000460909 LY6KQ17RY6 165 aa23.62■■□□□ 1.37
RPUSD3-210ENST00000460909 CCDC148Q8NFR7 591 aa23.62■■□□□ 1.37
RPUSD3-210ENST00000460909 PGBD1Q96JS3 809 aa23.62■■□□□ 1.37
RPUSD3-210ENST00000460909 ZSCAN31Q96LW9 406 aaPredicted RBP23.62■■□□□ 1.37
RPUSD3-210ENST00000460909 SENP6Q9GZR1 1112 aaPredicted RBP23.62■■□□□ 1.37
RPUSD3-210ENST00000460909 SPC25Q9HBM1 224 aa23.62■■□□□ 1.37
RPUSD3-210ENST00000460909 CD2BP2O95400 341 aaKnown RBP23.61■■□□□ 1.37
RPUSD3-210ENST00000460909 GNA11P29992 359 aa23.61■■□□□ 1.37
RPUSD3-210ENST00000460909 ACLYP53396 1101 aa23.61■■□□□ 1.37
RPUSD3-210ENST00000460909 BEX3Q00994 111 aa23.61■■□□□ 1.37
RPUSD3-210ENST00000460909 FSCN1Q16658 493 aaKnown RBP23.61■■□□□ 1.37
RPUSD3-210ENST00000460909 GNASQ5JWF2 1037 aa23.61■■□□□ 1.37
RPUSD3-210ENST00000460909 ANO3Q9BYT9 981 aa23.61■■□□□ 1.37
RPUSD3-210ENST00000460909 AP5M1Q9H0R1 490 aa23.61■■□□□ 1.37
RPUSD3-210ENST00000460909 RTEL1Q9NZ71 1219 aa23.61■■□□□ 1.37
RPUSD3-210ENST00000460909 ORC3Q9UBD5 711 aaPredicted RBP23.61■■□□□ 1.37
RPUSD3-210ENST00000460909 JAK2O60674 1132 aa23.6■■□□□ 1.37
RPUSD3-210ENST00000460909 ICAM3P32942 547 aa23.6■■□□□ 1.37
RPUSD3-210ENST00000460909 NPY5RQ15761 445 aa23.6■■□□□ 1.37
RPUSD3-210ENST00000460909 FAM177A1Q8N128 213 aaPredicted RBP23.6■■□□□ 1.37
RPUSD3-210ENST00000460909 CRYGNQ8WXF5 182 aa23.6■■□□□ 1.37
RPUSD3-210ENST00000460909 HTATIP2Q9BUP3 242 aa23.6■■□□□ 1.37
RPUSD3-210ENST00000460909 MRVI1Q9Y6F6 885 aa23.6■■□□□ 1.37
RPUSD3-210ENST00000460909 MOXD2PA6NHM9 499 aa23.59■■□□□ 1.37
RPUSD3-210ENST00000460909 ST18O60284 1047 aa23.59■■□□□ 1.37
RPUSD3-210ENST00000460909 ASGR1P07306 291 aa23.59■■□□□ 1.37
RPUSD3-210ENST00000460909 TGFB3P10600 412 aa23.59■■□□□ 1.37
RPUSD3-210ENST00000460909 SREBF1P36956 1147 aa23.59■■□□□ 1.37
RPUSD3-210ENST00000460909 SP2Q02086 613 aa23.59■■□□□ 1.37
RPUSD3-210ENST00000460909 ARHGAP1Q07960 439 aa23.59■■□□□ 1.37
RPUSD3-210ENST00000460909 SEMA3FQ13275 785 aa23.59■■□□□ 1.37
RPUSD3-210ENST00000460909 JAKMIP3Q5VZ66 844 aa23.59■■□□□ 1.37
RPUSD3-210ENST00000460909 KCNV1Q6PIU1 500 aa23.59■■□□□ 1.37
RPUSD3-210ENST00000460909 REXO1Q8N1G1 1221 aaKnown RBP23.59■■□□□ 1.37
RPUSD3-210ENST00000460909 PCSK9Q8NBP7 692 aaKnown RBP23.59■■□□□ 1.37
RPUSD3-210ENST00000460909 FERMT2Q96AC1 680 aa23.59■■□□□ 1.37
RPUSD3-210ENST00000460909 SH2B1Q9NRF2 756 aaPredicted RBP23.59■■□□□ 1.37
RPUSD3-210ENST00000460909 A0A1W2PQ45 241 aaPredicted RBP23.58■■□□□ 1.37
RPUSD3-210ENST00000460909 A0A1W2PQY0 241 aa23.58■■□□□ 1.37
RPUSD3-210ENST00000460909 SPATA31C2B4DYI2 1134 aa23.58■■□□□ 1.37
RPUSD3-210ENST00000460909 ITGB5P18084 799 aa23.58■■□□□ 1.37
RPUSD3-210ENST00000460909 NLRP5P59047 1200 aa23.58■■□□□ 1.37
RPUSD3-210ENST00000460909 LRRC26Q2I0M4 334 aa23.58■■□□□ 1.37
RPUSD3-210ENST00000460909 GNPTABQ3T906 1256 aa23.58■■□□□ 1.37
RPUSD3-210ENST00000460909 MCTP2Q6DN12 878 aa23.58■■□□□ 1.37
RPUSD3-210ENST00000460909 CCDC83Q8IWF9 413 aa23.58■■□□□ 1.37
RPUSD3-210ENST00000460909 OR6J1Q8NGC5 347 aa23.58■■□□□ 1.37
RPUSD3-210ENST00000460909 BICD2Q8TD16 824 aa23.58■■□□□ 1.37
RPUSD3-210ENST00000460909 RASGRP4Q8TDF6 673 aa23.58■■□□□ 1.37
RPUSD3-210ENST00000460909 EHMT1Q9H9B1 1298 aa23.58■■□□□ 1.37
RPUSD3-210ENST00000460909 GJB4Q9NTQ9 266 aa23.58■■□□□ 1.37
RPUSD3-210ENST00000460909 UBIAD1Q9Y5Z9 338 aa23.58■■□□□ 1.37
RPUSD3-210ENST00000460909 MYH7BA7E2Y1 1941 aa23.58■■□□□ 1.37
RPUSD3-210ENST00000460909 A6NJR5 290 aa23.57■■□□□ 1.36
RPUSD3-210ENST00000460909 M0R2N6 131 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms