RNA–Protein interactions for RNA: ENST00000460509.1

VBP1-202, Transcript of VHL binding protein 1, humanhuman

TSL 2

Gene VBP1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-202ENST00000460509 PLAAQ9Y263 795 aa6.8□□□□□ -1.32
VBP1-202ENST00000460509 FAM47E-STBD1D6RA91 191 aa6.79□□□□□ -1.32
VBP1-202ENST00000460509 NTRK1P04629 796 aa6.79□□□□□ -1.32
VBP1-202ENST00000460509 PNLIPP16233 465 aa6.79□□□□□ -1.32
VBP1-202ENST00000460509 DNM2P50570 870 aa6.79□□□□□ -1.32
VBP1-202ENST00000460509 ST5P78524 1137 aa6.79□□□□□ -1.32
VBP1-202ENST00000460509 MPZL3Q6UWV2 235 aa6.79□□□□□ -1.32
VBP1-202ENST00000460509 NLRP10Q86W26 655 aa6.79□□□□□ -1.32
VBP1-202ENST00000460509 ZSWIM9Q86XI8 627 aa6.79□□□□□ -1.32
VBP1-202ENST00000460509 SHISA4Q96DD7 197 aa6.79□□□□□ -1.32
VBP1-202ENST00000460509 MFSD3Q96ES6 412 aa6.79□□□□□ -1.32
VBP1-202ENST00000460509 MTA3Q9BTC8 594 aa6.79□□□□□ -1.32
VBP1-202ENST00000460509 CRTAC1Q9NQ79 661 aa6.79□□□□□ -1.32
VBP1-202ENST00000460509 FBLN5Q9UBX5 448 aa6.79□□□□□ -1.32
VBP1-202ENST00000460509 TNPO3Q9Y5L0 923 aaKnown RBP6.79□□□□□ -1.32
VBP1-202ENST00000460509 TCRBV16S1A1N1A0A5B0 115 aa6.78□□□□□ -1.32
VBP1-202ENST00000460509 NUDT19A8MXV4 375 aa6.78□□□□□ -1.32
VBP1-202ENST00000460509 H7BY64 318 aa6.78□□□□□ -1.32
VBP1-202ENST00000460509 KCNQ2O43526 872 aa6.78□□□□□ -1.32
VBP1-202ENST00000460509 DNAJC8O75937 253 aaPredicted RBP6.78□□□□□ -1.32
VBP1-202ENST00000460509 MYCLP1P12525 358 aaPredicted RBP6.78□□□□□ -1.32
VBP1-202ENST00000460509 CANXP27824 592 aaKnown RBP6.78□□□□□ -1.32
VBP1-202ENST00000460509 NEK4P51957 841 aa6.78□□□□□ -1.32
VBP1-202ENST00000460509 ZNF460Q14592 562 aa6.78□□□□□ -1.32
VBP1-202ENST00000460509 PLEKHO2Q8TD55 490 aa6.78□□□□□ -1.32
VBP1-202ENST00000460509 FAM168AQ92567 244 aa6.78□□□□□ -1.32
VBP1-202ENST00000460509 INTS4Q96HW7 963 aaKnown RBP6.78□□□□□ -1.32
VBP1-202ENST00000460509 CATSPERZQ9NTU4 200 aa6.78□□□□□ -1.32
VBP1-202ENST00000460509 MAGEC2Q9UBF1 373 aaPredicted RBP6.78□□□□□ -1.32
VBP1-202ENST00000460509 YBX2Q9Y2T7 364 aaKnown RBP6.78□□□□□ -1.32
VBP1-202ENST00000460509 COQ6Q9Y2Z9 468 aa6.78□□□□□ -1.32
VBP1-202ENST00000460509 ZC3H12DA2A288 527 aaKnown RBP6.77□□□□□ -1.33
VBP1-202ENST00000460509 F8W031 263 aaPredicted RBP6.77□□□□□ -1.33
VBP1-202ENST00000460509 DGKIO75912 1065 aa6.77□□□□□ -1.33
VBP1-202ENST00000460509 ASLP04424 464 aa6.77□□□□□ -1.33
VBP1-202ENST00000460509 MPOP05164 745 aa6.77□□□□□ -1.33
VBP1-202ENST00000460509 GLI1P08151 1106 aa6.77□□□□□ -1.33
VBP1-202ENST00000460509 PYGMP11217 842 aa6.77□□□□□ -1.33
VBP1-202ENST00000460509 GNAT1P11488 350 aa6.77□□□□□ -1.33
VBP1-202ENST00000460509 COL6A2P12110 1019 aa6.77□□□□□ -1.33
VBP1-202ENST00000460509 IGFALSP35858 605 aa6.77□□□□□ -1.33
VBP1-202ENST00000460509 FLT3P36888 993 aa6.77□□□□□ -1.33
VBP1-202ENST00000460509 RAB3GAP1Q15042 981 aa6.77□□□□□ -1.33
VBP1-202ENST00000460509 RNF187Q5TA31 235 aaPredicted RBP6.77□□□□□ -1.33
VBP1-202ENST00000460509 WWC2Q6AWC2 1192 aa6.77□□□□□ -1.33
VBP1-202ENST00000460509 PCDH19Q8TAB3 1148 aa6.77□□□□□ -1.33
VBP1-202ENST00000460509 FBXW5Q969U6 566 aa6.77□□□□□ -1.33
VBP1-202ENST00000460509 SLC6A17Q9H1V8 727 aa6.77□□□□□ -1.33
VBP1-202ENST00000460509 ANKRD62A6NC57 917 aa6.76□□□□□ -1.33
VBP1-202ENST00000460509 ARVCFO00192 962 aa6.76□□□□□ -1.33
VBP1-202ENST00000460509 PAPLNO95428 1278 aa6.76□□□□□ -1.33
VBP1-202ENST00000460509 JMJD7P0C870 316 aa6.76□□□□□ -1.33
VBP1-202ENST00000460509 RBM10P98175 930 aaKnown RBP6.76□□□□□ -1.33
VBP1-202ENST00000460509 CFAP100Q494V2 611 aa6.76□□□□□ -1.33
VBP1-202ENST00000460509 FAM47CQ5HY64 1035 aa6.76□□□□□ -1.33
VBP1-202ENST00000460509 MROH9Q5TGP6 573 aa6.76□□□□□ -1.33
VBP1-202ENST00000460509 UBE2R2Q712K3 238 aaPredicted RBP6.76□□□□□ -1.33
VBP1-202ENST00000460509 FILIP1Q7Z7B0 1213 aa6.76□□□□□ -1.33
VBP1-202ENST00000460509 LRRTM3Q86VH5 581 aa6.76□□□□□ -1.33
VBP1-202ENST00000460509 EPB41L1Q9H4G0 881 aa6.76□□□□□ -1.33
VBP1-202ENST00000460509 SIT1Q9Y3P8 196 aa6.76□□□□□ -1.33
VBP1-202ENST00000460509 X6R8D5 127 aa6.76□□□□□ -1.33
VBP1-202ENST00000460509 CCDC66A2RUB6 948 aa6.75□□□□□ -1.33
VBP1-202ENST00000460509 OR14I1A6ND48 311 aa6.75□□□□□ -1.33
VBP1-202ENST00000460509 B4E1Z4 1266 aa6.75□□□□□ -1.33
VBP1-202ENST00000460509 GSTA4O15217 222 aa6.75□□□□□ -1.33
VBP1-202ENST00000460509 KPNA6O60684 536 aa6.75□□□□□ -1.33
VBP1-202ENST00000460509 DBHP09172 617 aa6.75□□□□□ -1.33
VBP1-202ENST00000460509 KRT15P19012 456 aa6.75□□□□□ -1.33
VBP1-202ENST00000460509 SPIRE1Q08AE8 756 aa6.75□□□□□ -1.33
VBP1-202ENST00000460509 TM4SF20Q53R12 229 aa6.75□□□□□ -1.33
VBP1-202ENST00000460509 PIK3R6Q5UE93 754 aa6.75□□□□□ -1.33
VBP1-202ENST00000460509 EP400NLQ6ZTU2 488 aa6.75□□□□□ -1.33
VBP1-202ENST00000460509 DDX53Q86TM3 631 aaKnown RBP6.75□□□□□ -1.33
VBP1-202ENST00000460509 CISD2Q8N5K1 135 aaKnown RBP6.75□□□□□ -1.33
VBP1-202ENST00000460509 IGSF22Q8N9C0 903 aa6.75□□□□□ -1.33
VBP1-202ENST00000460509 LIN37Q96GY3 246 aaPredicted RBP6.75□□□□□ -1.33
VBP1-202ENST00000460509 KRTAP4-7Q9BYR0 210 aa6.75□□□□□ -1.33
VBP1-202ENST00000460509 GOLGA2P5Q9HBQ8 144 aa6.75□□□□□ -1.33
VBP1-202ENST00000460509 TNFRSF12AQ9NP84 129 aa6.75□□□□□ -1.33
VBP1-202ENST00000460509 INTS7Q9NVH2 962 aaKnown RBP6.75□□□□□ -1.33
VBP1-202ENST00000460509 SAMD15Q9P1V8 674 aa6.75□□□□□ -1.33
VBP1-202ENST00000460509 NUDT5Q9UKK9 219 aa6.75□□□□□ -1.33
VBP1-202ENST00000460509 PDE8AO60658 829 aa6.74□□□□□ -1.33
VBP1-202ENST00000460509 GLI4P10075 376 aa6.74□□□□□ -1.33
VBP1-202ENST00000460509 CNGA1P29973 690 aa6.74□□□□□ -1.33
VBP1-202ENST00000460509 MASP1P48740 699 aa6.74□□□□□ -1.33
VBP1-202ENST00000460509 CRY1Q16526 586 aa6.74□□□□□ -1.33
VBP1-202ENST00000460509 PAQR3Q6TCH7 311 aa6.74□□□□□ -1.33
VBP1-202ENST00000460509 ZNF605Q86T29 641 aa6.74□□□□□ -1.33
VBP1-202ENST00000460509 UBR7Q8N806 425 aa6.74□□□□□ -1.33
VBP1-202ENST00000460509 PIP4K2CQ8TBX8 421 aa6.74□□□□□ -1.33
VBP1-202ENST00000460509 WNK4Q96J92 1243 aa6.74□□□□□ -1.33
VBP1-202ENST00000460509 DIRC2Q96SL1 478 aa6.74□□□□□ -1.33
VBP1-202ENST00000460509 TARS2Q9BW92 718 aaKnown RBP6.74□□□□□ -1.33
VBP1-202ENST00000460509 AP5M1Q9H0R1 490 aa6.74□□□□□ -1.33
VBP1-202ENST00000460509 CDIP1Q9H305 208 aa6.74□□□□□ -1.33
VBP1-202ENST00000460509 KRIT1O00522 736 aa6.73□□□□□ -1.33
VBP1-202ENST00000460509 DNAJC6O75061 913 aa6.73□□□□□ -1.33
VBP1-202ENST00000460509 CYBBP04839 570 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms