RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 BAZ2BQ9UIF8 2168 aaKnown RBP26.43■■□□□ 1.82
PTPN4-207ENST00000460162 PITPNM1O00562 1244 aa26.42■■□□□ 1.82
PTPN4-207ENST00000460162 ANTXR2P58335 489 aa26.42■■□□□ 1.82
PTPN4-207ENST00000460162 TMEM67Q5HYA8 995 aa26.42■■□□□ 1.82
PTPN4-207ENST00000460162 OTOP2Q7RTS6 562 aa26.42■■□□□ 1.82
PTPN4-207ENST00000460162 CATIPQ7Z7H3 387 aa26.42■■□□□ 1.82
PTPN4-207ENST00000460162 SCLYQ96I15 445 aa26.42■■□□□ 1.82
PTPN4-207ENST00000460162 DDX41Q9UJV9 622 aaKnown RBP26.42■■□□□ 1.82
PTPN4-207ENST00000460162 MRVI1Q9Y6F6 885 aa26.42■■□□□ 1.82
PTPN4-207ENST00000460162 GRXCR1A8MXD5 290 aa26.41■■□□□ 1.82
PTPN4-207ENST00000460162 CYTH3O43739 400 aa26.41■■□□□ 1.82
PTPN4-207ENST00000460162 RFC2P35250 354 aa26.41■■□□□ 1.82
PTPN4-207ENST00000460162 PBX2P40425 430 aa26.41■■□□□ 1.82
PTPN4-207ENST00000460162 GRIN2CQ14957 1233 aa26.41■■□□□ 1.82
PTPN4-207ENST00000460162 CHST3Q7LGC8 479 aa26.41■■□□□ 1.82
PTPN4-207ENST00000460162 SESTD1Q86VW0 696 aa26.41■■□□□ 1.82
PTPN4-207ENST00000460162 MTA3Q9BTC8 594 aa26.41■■□□□ 1.82
PTPN4-207ENST00000460162 MYH7BA7E2Y1 1941 aa26.4■■□□□ 1.82
PTPN4-207ENST00000460162 CHD9Q3L8U1 2897 aa26.4■■□□□ 1.82
PTPN4-207ENST00000460162 PNMA6FA0A0J9YX94 578 aa26.4■■□□□ 1.82
PTPN4-207ENST00000460162 CASTP20810 708 aaKnown RBP26.4■■□□□ 1.82
PTPN4-207ENST00000460162 IGDCC4Q8TDY8 1250 aa26.4■■□□□ 1.82
PTPN4-207ENST00000460162 MSRAQ9UJ68 235 aa26.4■■□□□ 1.82
PTPN4-207ENST00000460162 NOD1Q9Y239 953 aa26.4■■□□□ 1.82
PTPN4-207ENST00000460162 GCOM1H8Y6P7 765 aaPredicted RBP26.39■■□□□ 1.82
PTPN4-207ENST00000460162 DDAH1O94760 285 aa26.39■■□□□ 1.82
PTPN4-207ENST00000460162 POLR2MP0CAP2 368 aa26.39■■□□□ 1.82
PTPN4-207ENST00000460162 HOXA13P31271 388 aaPredicted RBP26.39■■□□□ 1.82
PTPN4-207ENST00000460162 PGM5Q15124 567 aa26.39■■□□□ 1.82
PTPN4-207ENST00000460162 DGKDQ16760 1214 aa26.39■■□□□ 1.82
PTPN4-207ENST00000460162 KCNV1Q6PIU1 500 aa26.39■■□□□ 1.82
PTPN4-207ENST00000460162 VWCEQ96DN2 955 aa26.39■■□□□ 1.82
PTPN4-207ENST00000460162 MAP3K14Q99558 947 aa26.39■■□□□ 1.82
PTPN4-207ENST00000460162 BFSP2Q13515 415 aa26.38■■□□□ 1.81
PTPN4-207ENST00000460162 LAMC2Q13753 1193 aa26.38■■□□□ 1.81
PTPN4-207ENST00000460162 PPTC7Q8NI37 304 aa26.38■■□□□ 1.81
PTPN4-207ENST00000460162 PPP1R13LQ8WUF5 828 aa26.38■■□□□ 1.81
PTPN4-207ENST00000460162 SLC4A7Q9Y6M7 1214 aa26.38■■□□□ 1.81
PTPN4-207ENST00000460162 MYCLP12524 364 aaPredicted RBP26.37■■□□□ 1.81
PTPN4-207ENST00000460162 CASC1Q6TDU7 716 aa26.37■■□□□ 1.81
PTPN4-207ENST00000460162 VSIG10LQ86VR7 867 aa26.37■■□□□ 1.81
PTPN4-207ENST00000460162 ZNF654Q8IZM8 581 aa26.37■■□□□ 1.81
PTPN4-207ENST00000460162 CCDC155Q8N6L0 562 aa26.37■■□□□ 1.81
PTPN4-207ENST00000460162 RETREG2Q8NC44 543 aa26.37■■□□□ 1.81
PTPN4-207ENST00000460162 CTCFLQ8NI51 663 aaPredicted RBP26.37■■□□□ 1.81
PTPN4-207ENST00000460162 KAT2BQ92831 832 aa26.37■■□□□ 1.81
PTPN4-207ENST00000460162 KATNAL1Q9BW62 490 aa26.37■■□□□ 1.81
PTPN4-207ENST00000460162 SPZ1Q9BXG8 430 aa26.37■■□□□ 1.81
PTPN4-207ENST00000460162 LSG1Q9H089 658 aaKnown RBP26.37■■□□□ 1.81
PTPN4-207ENST00000460162 LY9Q9HBG7 655 aa26.37■■□□□ 1.81
PTPN4-207ENST00000460162 PRUNE2Q8WUY3 3088 aa26.37■■□□□ 1.81
PTPN4-207ENST00000460162 FRMPD4Q14CM0 1322 aa26.37■■□□□ 1.81
PTPN4-207ENST00000460162 RGS20O76081 388 aa26.36■■□□□ 1.81
PTPN4-207ENST00000460162 F2P00734 622 aa26.36■■□□□ 1.81
PTPN4-207ENST00000460162 CCND2P30279 289 aa26.36■■□□□ 1.81
PTPN4-207ENST00000460162 KIF5BP33176 963 aa26.36■■□□□ 1.81
PTPN4-207ENST00000460162 CHMP4BP1P59074 171 aa26.36■■□□□ 1.81
PTPN4-207ENST00000460162 PTGISQ16647 500 aa26.36■■□□□ 1.81
PTPN4-207ENST00000460162 DHX37Q8IY37 1157 aaKnown RBP26.36■■□□□ 1.81
PTPN4-207ENST00000460162 IL31RAQ8NI17 732 aa26.36■■□□□ 1.81
PTPN4-207ENST00000460162 CAGE1Q8TC20 777 aa26.36■■□□□ 1.81
PTPN4-207ENST00000460162 ESYT1Q9BSJ8 1104 aa26.36■■□□□ 1.81
PTPN4-207ENST00000460162 ZBBXA8MT70 800 aa26.35■■□□□ 1.81
PTPN4-207ENST00000460162 IQCF3P0C7M6 154 aa26.35■■□□□ 1.81
PTPN4-207ENST00000460162 ACTN1P12814 892 aa26.35■■□□□ 1.81
PTPN4-207ENST00000460162 HOXD8P13378 290 aaPredicted RBP26.35■■□□□ 1.81
PTPN4-207ENST00000460162 DEFB128Q7Z7B8 93 aa26.35■■□□□ 1.81
PTPN4-207ENST00000460162 TMEM87BQ96K49 555 aa26.35■■□□□ 1.81
PTPN4-207ENST00000460162 PRC1O43663 620 aa26.34■■□□□ 1.81
PTPN4-207ENST00000460162 TGFB3P10600 412 aa26.34■■□□□ 1.81
PTPN4-207ENST00000460162 SMARCA1P28370 1054 aa26.34■■□□□ 1.81
PTPN4-207ENST00000460162 MCM5P33992 734 aa26.34■■□□□ 1.81
PTPN4-207ENST00000460162 GDF6Q6KF10 455 aaPredicted RBP26.34■■□□□ 1.81
PTPN4-207ENST00000460162 AFAP1L1Q8TED9 768 aa26.34■■□□□ 1.81
PTPN4-207ENST00000460162 GAS2L1Q99501 681 aaPredicted RBP26.34■■□□□ 1.81
PTPN4-207ENST00000460162 GTF2IRD1Q9UHL9 959 aa26.34■■□□□ 1.81
PTPN4-207ENST00000460162 TRIP12Q14669 1992 aaPredicted RBP26.34■■□□□ 1.81
PTPN4-207ENST00000460162 SH2B2O14492 632 aaPredicted RBP26.33■■□□□ 1.81
PTPN4-207ENST00000460162 UBA1P22314 1058 aaKnown RBP26.33■■□□□ 1.81
PTPN4-207ENST00000460162 RBL2Q08999 1139 aa26.33■■□□□ 1.81
PTPN4-207ENST00000460162 MYSM1Q5VVJ2 828 aa26.33■■□□□ 1.81
PTPN4-207ENST00000460162 FCHSD1Q86WN1 690 aa26.33■■□□□ 1.81
PTPN4-207ENST00000460162 TMTC2Q8N394 836 aa26.33■■□□□ 1.81
PTPN4-207ENST00000460162 RRP36Q96EU6 259 aaKnown RBP26.33■■□□□ 1.81
PTPN4-207ENST00000460162 CTAGE1Q96RT6 745 aa26.33■■□□□ 1.81
PTPN4-207ENST00000460162 LZTS2Q9BRK4 669 aa26.33■■□□□ 1.81
PTPN4-207ENST00000460162 MYL10Q9BUA6 226 aa26.33■■□□□ 1.81
PTPN4-207ENST00000460162 NKX2-4Q9H2Z4 354 aa26.33■■□□□ 1.81
PTPN4-207ENST00000460162 SLC28A3Q9HAS3 691 aa26.33■■□□□ 1.81
PTPN4-207ENST00000460162 YBX2Q9Y2T7 364 aaKnown RBP26.33■■□□□ 1.81
PTPN4-207ENST00000460162 PCDHA11Q9Y5I1 949 aa26.33■■□□□ 1.81
PTPN4-207ENST00000460162 HAS3O00219 553 aa26.32■■□□□ 1.8
PTPN4-207ENST00000460162 SLC27A2O14975 620 aa26.32■■□□□ 1.8
PTPN4-207ENST00000460162 STAM2O75886 525 aa26.32■■□□□ 1.8
PTPN4-207ENST00000460162 GGPS1O95749 300 aa26.32■■□□□ 1.8
PTPN4-207ENST00000460162 ZNF286BP0CG31 522 aa26.32■■□□□ 1.8
PTPN4-207ENST00000460162 ATP2A2P16615 1042 aaKnown RBP26.32■■□□□ 1.8
PTPN4-207ENST00000460162 PSEN2P49810 448 aa26.32■■□□□ 1.8
PTPN4-207ENST00000460162 MFSD10Q14728 455 aa26.32■■□□□ 1.8
PTPN4-207ENST00000460162 GNPTABQ3T906 1256 aa26.32■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms