RNA–Protein interactions for RNA: ENST00000460160.5

HOXB3-202, Transcript of homeobox B3, humanhuman

TSL 5 BASIC

Gene HOXB3, Length 1,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-202ENST00000460160 VSIG10LQ86VR7 867 aa27.35■■□□□ 1.97
HOXB3-202ENST00000460160 SEZ6LQ9BYH1 1024 aa27.35■■□□□ 1.97
HOXB3-202ENST00000460160 MYCLP12524 364 aaPredicted RBP27.34■■□□□ 1.97
HOXB3-202ENST00000460160 CPA1P15085 419 aa27.34■■□□□ 1.97
HOXB3-202ENST00000460160 ARHGAP1Q07960 439 aa27.34■■□□□ 1.97
HOXB3-202ENST00000460160 CCDC82Q8N4S0 544 aa27.34■■□□□ 1.97
HOXB3-202ENST00000460160 DDX41Q9UJV9 622 aaKnown RBP27.34■■□□□ 1.97
HOXB3-202ENST00000460160 hCG_1642624A0A1W2PR95 340 aa27.33■■□□□ 1.97
HOXB3-202ENST00000460160 TLR3O15455 904 aaKnown RBP27.33■■□□□ 1.97
HOXB3-202ENST00000460160 TIMP1P01033 207 aa27.33■■□□□ 1.97
HOXB3-202ENST00000460160 GH1P01241 217 aa27.33■■□□□ 1.97
HOXB3-202ENST00000460160 C9orf50Q5SZB4 431 aa27.33■■□□□ 1.97
HOXB3-202ENST00000460160 JAKMIP1Q96N16 626 aaKnown RBP27.33■■□□□ 1.97
HOXB3-202ENST00000460160 MTG1Q9BT17 334 aaPredicted RBP27.33■■□□□ 1.97
HOXB3-202ENST00000460160 FRMPD4Q14CM0 1322 aa27.33■■□□□ 1.97
HOXB3-202ENST00000460160 ZBTB43O43298 467 aa27.32■■□□□ 1.96
HOXB3-202ENST00000460160 MRVI1Q9Y6F6 885 aa27.32■■□□□ 1.96
HOXB3-202ENST00000460160 CENPBP07199 599 aaPredicted RBP27.31■■□□□ 1.96
HOXB3-202ENST00000460160 CCND2P30279 289 aa27.31■■□□□ 1.96
HOXB3-202ENST00000460160 EPHB4P54760 987 aa27.31■■□□□ 1.96
HOXB3-202ENST00000460160 SHHQ15465 462 aa27.31■■□□□ 1.96
HOXB3-202ENST00000460160 USP17L6PQ6QN14 398 aa27.31■■□□□ 1.96
HOXB3-202ENST00000460160 AFG1LQ8WV93 481 aa27.31■■□□□ 1.96
HOXB3-202ENST00000460160 TRPV6Q9H1D0 765 aa27.31■■□□□ 1.96
HOXB3-202ENST00000460160 RBM28Q9NW13 759 aaKnown RBP27.31■■□□□ 1.96
HOXB3-202ENST00000460160 KLF18A0A0U1RQI7 1052 aa27.31■■□□□ 1.96
HOXB3-202ENST00000460160 PIK3CDO00329 1044 aa27.31■■□□□ 1.96
HOXB3-202ENST00000460160 MEIS2O14770 477 aa27.31■■□□□ 1.96
HOXB3-202ENST00000460160 KPNA6O60684 536 aa27.31■■□□□ 1.96
HOXB3-202ENST00000460160 FPGSQ05932 587 aa27.31■■□□□ 1.96
HOXB3-202ENST00000460160 RTN1Q16799 776 aa27.31■■□□□ 1.96
HOXB3-202ENST00000460160 CNTNAP5Q8WYK1 1306 aa27.31■■□□□ 1.96
HOXB3-202ENST00000460160 COL6A3P12111 3177 aa27.3■■□□□ 1.96
HOXB3-202ENST00000460160 B4GALT4O60513 344 aa27.3■■□□□ 1.96
HOXB3-202ENST00000460160 MMP3P08254 477 aa27.3■■□□□ 1.96
HOXB3-202ENST00000460160 FUT2Q10981 343 aa27.3■■□□□ 1.96
HOXB3-202ENST00000460160 EMID1Q96A84 441 aaPredicted RBP27.3■■□□□ 1.96
HOXB3-202ENST00000460160 ZFP91Q96JP5 570 aaPredicted RBP27.3■■□□□ 1.96
HOXB3-202ENST00000460160 ALDH8A1Q9H2A2 487 aaPredicted RBP27.3■■□□□ 1.96
HOXB3-202ENST00000460160 MFSD5Q6N075 450 aa27.29■■□□□ 1.96
HOXB3-202ENST00000460160 SMARCC2Q8TAQ2 1214 aa27.29■■□□□ 1.96
HOXB3-202ENST00000460160 CUL5Q93034 780 aa27.29■■□□□ 1.96
HOXB3-202ENST00000460160 GOLGA8AA7E2F4 631 aa27.28■■□□□ 1.96
HOXB3-202ENST00000460160 GOLGA8BA8MQT2 603 aa27.28■■□□□ 1.96
HOXB3-202ENST00000460160 RCAN1P53805 252 aa27.28■■□□□ 1.96
HOXB3-202ENST00000460160 MRPS9P82933 396 aaKnown RBP27.28■■□□□ 1.96
HOXB3-202ENST00000460160 NBPF20Q3BBV1 942 aa27.28■■□□□ 1.96
HOXB3-202ENST00000460160 KCNV1Q6PIU1 500 aa27.28■■□□□ 1.96
HOXB3-202ENST00000460160 BLOC1S2Q6QNY1 142 aa27.28■■□□□ 1.96
HOXB3-202ENST00000460160 Q6ZUG5 572 aa27.28■■□□□ 1.96
HOXB3-202ENST00000460160 PPP1R12CQ9BZL4 782 aa27.28■■□□□ 1.96
HOXB3-202ENST00000460160 PSTPIP2Q9H939 334 aa27.28■■□□□ 1.96
HOXB3-202ENST00000460160 FAM217BQ9NTX9 383 aaPredicted RBP27.28■■□□□ 1.96
HOXB3-202ENST00000460160 EPB41L2O43491 1005 aaKnown RBP27.27■■□□□ 1.96
HOXB3-202ENST00000460160 FGD1P98174 961 aa27.27■■□□□ 1.96
HOXB3-202ENST00000460160 GPKOWQ92917 476 aaPredicted RBP eCLIP27.27■■□□□ 1.969e-6■■□□□ 14.5
HOXB3-202ENST00000460160 APOBRQ0VD83 1088 aa27.26■■□□□ 1.96
HOXB3-202ENST00000460160 GPR153Q6NV75 609 aa27.26■■□□□ 1.96
HOXB3-202ENST00000460160 HEATR3Q7Z4Q2 680 aa27.26■■□□□ 1.96
HOXB3-202ENST00000460160 PPP1R13LQ8WUF5 828 aa27.26■■□□□ 1.96
HOXB3-202ENST00000460160 TRMT13Q9NUP7 481 aaKnown RBP27.26■■□□□ 1.96
HOXB3-202ENST00000460160 UBA1P22314 1058 aaKnown RBP27.26■■□□□ 1.95
HOXB3-202ENST00000460160 RPS6KB1P23443 525 aa27.26■■□□□ 1.95
HOXB3-202ENST00000460160 CDC27P30260 824 aa27.26■■□□□ 1.95
HOXB3-202ENST00000460160 CYP2C18P33260 490 aa27.26■■□□□ 1.95
HOXB3-202ENST00000460160 SP2Q02086 613 aa27.26■■□□□ 1.95
HOXB3-202ENST00000460160 LAMC2Q13753 1193 aa27.26■■□□□ 1.95
HOXB3-202ENST00000460160 NFRKBQ6P4R8 1299 aa27.26■■□□□ 1.95
HOXB3-202ENST00000460160 DHX37Q8IY37 1157 aaKnown RBP27.26■■□□□ 1.95
HOXB3-202ENST00000460160 FBXL16Q8N461 479 aa27.26■■□□□ 1.95
HOXB3-202ENST00000460160 PPTC7Q8NI37 304 aa27.26■■□□□ 1.95
HOXB3-202ENST00000460160 BRF1Q92994 677 aa27.26■■□□□ 1.95
HOXB3-202ENST00000460160 NOC4LQ9BVI4 516 aaKnown RBP27.26■■□□□ 1.95
HOXB3-202ENST00000460160 USP26Q9BXU7 913 aa27.26■■□□□ 1.95
HOXB3-202ENST00000460160 HIPK3Q9H422 1215 aa27.26■■□□□ 1.95
HOXB3-202ENST00000460160 DOCK5Q9H7D0 1870 aa27.26■■□□□ 1.95
HOXB3-202ENST00000460160 UMODL1Q5DID0 1318 aa27.25■■□□□ 1.95
HOXB3-202ENST00000460160 TGFB3P10600 412 aa27.25■■□□□ 1.95
HOXB3-202ENST00000460160 CASTP20810 708 aaKnown RBP27.25■■□□□ 1.95
HOXB3-202ENST00000460160 CELF3Q5SZQ8 465 aaKnown RBP27.25■■□□□ 1.95
HOXB3-202ENST00000460160 MYSM1Q5VVJ2 828 aa27.25■■□□□ 1.95
HOXB3-202ENST00000460160 WWC2Q6AWC2 1192 aa27.25■■□□□ 1.95
HOXB3-202ENST00000460160 KAT2BQ92831 832 aa27.25■■□□□ 1.95
HOXB3-202ENST00000460160 INPP4AQ96PE3 977 aaPredicted RBP27.25■■□□□ 1.95
HOXB3-202ENST00000460160 NAP1L2Q9ULW6 460 aaPredicted RBP27.25■■□□□ 1.95
HOXB3-202ENST00000460160 STAM2O75886 525 aa27.24■■□□□ 1.95
HOXB3-202ENST00000460160 CSF2RAP15509 400 aa27.24■■□□□ 1.95
HOXB3-202ENST00000460160 PSMA5P28066 241 aa27.24■■□□□ 1.95
HOXB3-202ENST00000460160 DGKDQ16760 1214 aa27.24■■□□□ 1.95
HOXB3-202ENST00000460160 FAM47CQ5HY64 1035 aa27.24■■□□□ 1.95
HOXB3-202ENST00000460160 AGXT2Q9BYV1 514 aa27.24■■□□□ 1.95
HOXB3-202ENST00000460160 V9GY48 417 aaPredicted RBP27.24■■□□□ 1.95
HOXB3-202ENST00000460160 SORBS3O60504 671 aa27.23■■□□□ 1.95
HOXB3-202ENST00000460160 GGPS1O95749 300 aa27.23■■□□□ 1.95
HOXB3-202ENST00000460160 PPIGQ13427 754 aaKnown RBP eCLIP27.23■■□□□ 1.95
HOXB3-202ENST00000460160 UBE2SQ16763 222 aa27.23■■□□□ 1.95
HOXB3-202ENST00000460160 PCNX4Q63HM2 1172 aa27.23■■□□□ 1.95
HOXB3-202ENST00000460160 TMEM199Q8N511 208 aa27.23■■□□□ 1.95
HOXB3-202ENST00000460160 SUPT20HL2P0C7V6 817 aa27.22■■□□□ 1.95
HOXB3-202ENST00000460160 HOXD8P13378 290 aaPredicted RBP27.22■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms